Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G20
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476...    44   1e-04
05_03_0523 + 14991271-14991716,14991765-14991904,14992089-14992195     29   4.9  
07_01_0036 + 298626-299573,299973-300239                               29   6.5  

>08_02_0733 +
           20546072-20546325,20546924-20547017,20547441-20547624,
           20547722-20547831,20548328-20548423,20548525-20548679,
           20548743-20548986,20549159-20549314,20549600-20549829,
           20552213-20552316,20552420-20552505,20552776-20553066,
           20553383-20553475,20553640-20553735,20553838-20553939,
           20554196-20554266,20554784-20555035,20555786-20556529,
           20557038-20557119,20557192-20557347,20557446-20557655,
           20558282-20558665
          Length = 1397

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = +3

Query: 342 EPCEALQTQSKRYIFFQPEKNFWMVLVVRIPYTTKALSAVGESQGDIVNPTVMQNLLTSA 521
           + CE ++++   ++F+Q E + WMVLVV      ++    G  QG          +L   
Sbjct: 91  DDCEVIESEKHSHVFYQAEADIWMVLVVEKNKDIESTWRCGALQG----------ILKEV 140

Query: 522 YKMFKMFRGPFKNI----PADDL-YGISEQFFTPYIS 617
           + +F MF GP + +    P+ +L  G    FFT Y+S
Sbjct: 141 HSLFTMFHGPIRTLLDRQPSAELARGHLRTFFTDYLS 177


>05_03_0523 + 14991271-14991716,14991765-14991904,14992089-14992195
          Length = 230

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +3

Query: 453 SAVGESQGDIVNPTVMQNLLTSAYKMFKMFRGPFKNIPADDLYGISEQF 599
           S      G +V+P++   L+  A  +   F GP   +P  ++ G+  +F
Sbjct: 110 SGAAREAGILVDPSIAHRLVAVAIFVGAKFGGPIDRLPTREMAGLERRF 158


>07_01_0036 + 298626-299573,299973-300239
          Length = 404

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 373 LDCVCKASHGSDENVDINLTTASHSPTCIFRASGL 269
           LD +    H   E +D+N+  A H+P  +FR   L
Sbjct: 103 LDRLASREHHRLERLDVNIGAALHTPASLFRCETL 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,101,319
Number of Sequences: 37544
Number of extensions: 351486
Number of successful extensions: 648
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)