Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G20
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   2.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.5  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 282 RKMQVGLCEAVVKFMSTFSSEPCEALQTQSKRYIFFQPE 398
           R MQ    +   K  S  + +PCE      K Y+ F PE
Sbjct: 86  RSMQDSTKKLFNKCKSIQNEDPCEKAYQLVKCYVEFHPE 124


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 348  CEALQTQSKRYIFFQPEKN 404
            C A++T+SK Y F   EKN
Sbjct: 1715 CTAVETKSKPYKFHCMEKN 1733


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 660 INYXPLDKNPFLKWY 704
           ++  P DKNP   WY
Sbjct: 583 VDVIPTDKNPVQLWY 597


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 252 FYPNEVSPDARKMQVGLCEAVVKF 323
           FY    SPD  + Q+ L  AVV++
Sbjct: 898 FYSISSSPDVHQGQIHLTVAVVQY 921


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,004
Number of Sequences: 438
Number of extensions: 4011
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)