Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G19
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    27   0.25 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.3  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   2.3  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   7.1  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 260 HIRLDYHHIRPDCHHTRLGRLP 195
           H    YH   PDC H  LG +P
Sbjct: 346 HKNTPYHTPEPDCIHELLGHMP 367


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = -2

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRL-------DCHHIRLDCHHIRLDYHHIRPDCHH 216
           HHI+    Q++ GYH+   +Y+   L       + +H +L  HH    +H IRP   H
Sbjct: 53  HHIQQ--QQLQYGYHN-HQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILH 107


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = -2

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRL-------DCHHIRLDCHHIRLDYHHIRPDCHH 216
           HHI+    Q++ GYH+   +Y+   L       + +H +L  HH    +H IRP   H
Sbjct: 53  HHIQQ--QQLQYGYHN-HQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILH 107


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = -2

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRL-------DCHHIRLDCHHIRLDYHHIRPDCHH 216
           HHI+    Q++ GYH+   +Y+   L       + +H +L  HH    +H IRP   H
Sbjct: 53  HHIQQ--QQLQYGYHN-HQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILH 107


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = -2

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRL-------DCHHIRLDCHHIRLDYHHIRPDCHH 216
           HHI+    Q++ GYH+   +Y+   L       + +H +L  HH    +H IRP   H
Sbjct: 53  HHIQQ--QQLQYGYHN-HQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILH 107


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 582 LRKLNYYESHYCKVXKEI 529
           LRK  Y E   CK+ +EI
Sbjct: 67  LRKARYTEKGTCKMGREI 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,940
Number of Sequences: 336
Number of extensions: 2074
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)