Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_G19
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.005
U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical pr... 29 4.2
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 28 7.3
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Frame = -2
Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRL---DCHHIRLDYHHIRPDCHHTRLG-- 204
HH G H + G+H HH HH + H D+HH HH G
Sbjct: 602 HHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSHGVHHGHHGTH 661
Query: 203 -RLPGHNHHGRFAHQSFHGRIHT 138
L H HHG H + HG H+
Sbjct: 662 HSLAHHGHHG--GHGTHHGAHHS 682
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/76 (35%), Positives = 27/76 (35%)
Frame = -2
Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCHHTRLGRLPGH 189
HH G H G HH HH HH HH HH P HH GH
Sbjct: 395 HHDEHGVHHRHHGEHH---GTHHS--PAHHGEHGTHHGHHGEHHHAP-AHHGH-HESHGH 447
Query: 188 NHHGRFAHQSFHGRIH 141
HH AH HG H
Sbjct: 448 GHHSP-AHHGHHGEHH 462
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = -2
Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCHHTRLGRLPGH 189
HH G H + G+H HH HH H + +H HH G H
Sbjct: 576 HHGHHGSHGVHHGHHESHGHGHH--APAHHGHHGEHGVHHGHHGAGYGAHH---GHHGAH 630
Query: 188 NHHG-RFAHQSFHGRIHTGNRNM 123
+HH H HG H G+ +
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGV 653
Score = 35.9 bits (79), Expect = 0.037
Identities = 25/85 (29%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Frame = -2
Query: 380 GNRRHHIRLGCHQIRLGYHHIRP---DYHHIRLDCHHIRLDCHHIRLDY-HHIRPDCHHT 213
G HH G H +H D+HH HH HH + HH HH
Sbjct: 619 GYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHG 678
Query: 212 RLGRLPGHNHHG-RFAHQSFHGRIH 141
H HHG H + HG H
Sbjct: 679 AHHSPAHHGHHGAHHEHGAHHGAHH 703
Score = 35.1 bits (77), Expect = 0.064
Identities = 25/80 (31%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = -2
Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCHHTRLGRL-PG 192
HH G H + H +H HH HH HH P HH G
Sbjct: 490 HHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAP-AHHGHHGEHGTH 548
Query: 191 HNHHGRF---AHQSFHGRIH 141
H HHG AH HG H
Sbjct: 549 HGHHGSHHSPAHHGHHGEHH 568
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Frame = -2
Query: 347 HQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHH--IRPDCHHTRLGRLPGHN--HH 180
H+ + G HH + H HH HH HH HH G GH+ HH
Sbjct: 374 HEHKDGAHHEHKEGEHHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHH 433
Query: 179 GRFAHQSFH 153
AH H
Sbjct: 434 HAPAHHGHH 442
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/88 (30%), Positives = 31/88 (35%), Gaps = 11/88 (12%)
Frame = -2
Query: 380 GNRRHHIRLGCHQIRLGYHHIRPDYH--HIRLDCHHIRLDCHHIRLDY-----HHIRP-- 228
G+ H H G HH P +H H HH HH + HH P
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515
Query: 227 DCHHTRLGRLPGHN--HHGRFAHQSFHG 150
HH G GH+ HH AH HG
Sbjct: 516 HGHHGEHGTHHGHHGEHHHAPAHHGHHG 543
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/82 (31%), Positives = 29/82 (35%)
Frame = -2
Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCHHTRLGRLPGH 189
HH G H G HH P +H HH HH HH HH G
Sbjct: 518 HHGEHGTHHGHHGEHHHAPAHHG-----HHGEHGTHHGHHGSHH--SPAHHGHHGE---- 566
Query: 188 NHHGRFAHQSFHGRIHTGNRNM 123
HH AH HG H G+ +
Sbjct: 567 -HHHAPAHHGHHG--HHGSHGV 585
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = -2
Query: 347 HQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRP--DCHHTRLGRLPGH--NHH 180
H G+ H P +H + HH HH HH P HH G GH +HH
Sbjct: 441 HHESHGHGHHSPAHHGHHGEHHHA--PAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHH 498
Query: 179 GRFAHQSFHGRIH 141
AH HG H
Sbjct: 499 SP-AHHGHHGEHH 510
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/67 (29%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -2
Query: 347 HQIRLGYHHIRPDYHHIRLDCHHIRLDC-HHIRLDYHHIRPDCHHTRLGRLPGHNHHGRF 171
H G HH P +H + HH HH HH HH+ HH
Sbjct: 454 HHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAP 513
Query: 170 AHQSFHG 150
AH HG
Sbjct: 514 AHHGHHG 520
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = -2
Query: 326 HHIRPD-YHHIRLDCHHIRLDCHHIRLDYHHIRPDCHHTRLGRLPGHNHHGRFAHQSFHG 150
HH D HH + H HH HH HH H HG H HG
Sbjct: 373 HHEHKDGAHHEHKEGEHHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHG--THHGHHG 430
Query: 149 RIH 141
H
Sbjct: 431 EHH 433
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/76 (28%), Positives = 25/76 (32%), Gaps = 6/76 (7%)
Frame = -2
Query: 368 HHIRLGCHQIRLGYHHIRPDY-HHIRLDCHH--IRLDCHHIRLDYHH---IRPDCHHTRL 207
HH G H G HH + HH HH HH HH HH
Sbjct: 647 HHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHH 706
Query: 206 GRLPGHNHHGRFAHQS 159
H+HHG + S
Sbjct: 707 DDKENHHHHGHHSKHS 722
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = -2
Query: 326 HHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCHHTRLGRLPGHNHHGRFAHQSFHGR 147
HH ++H + HH + H HH HH G G HH AH HG
Sbjct: 370 HH---EHHEHKDGAHHEHKEGEHHEHAAHHDEHGVHHRHHGEHHG-THHSP-AHHGEHGT 424
Query: 146 IH 141
H
Sbjct: 425 HH 426
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 8/84 (9%)
Frame = -2
Query: 368 HHIRLGCHQI-----RLGYHHIRPDY--HHIRLDCHHIRLDCHHIRLDYHHI-RPDCHHT 213
HH G H G HH P + HH H + H HH HH
Sbjct: 548 HHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHG 607
Query: 212 RLGRLPGHNHHGRFAHQSFHGRIH 141
G GH+ G AH HG H
Sbjct: 608 EHGVHHGHHGAGYGAHHGHHGAHH 631
>U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical
protein F53A9.2 protein.
Length = 83
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 281 HIRLDCHHIRLDYHHIRPDCHHTRLGR-LPGHNHHGRFAHQSFHGRIHTGN 132
H+ D H +HH H LG L GH+HH H H H G+
Sbjct: 34 HVHTDGGHHHGHHHHHHSFLHE--LGHALTGHHHHHHGHHFGHHHHHHHGH 82
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 314 PDYHHIRLDC-HHIRLDCHHIRLDYHH-IRPDCHH--TRLGRLPGHNHHGRFAH 165
P H+ D HH +D HH +HH HH H+HHG H
Sbjct: 32 PPTVHVHTDGGHHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHGH 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,782,549
Number of Sequences: 27780
Number of extensions: 184127
Number of successful extensions: 564
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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