Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G16
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq...    33   1.8  
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio...    33   1.8  
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.             33   1.8  

>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA
           sequence from clone RP4-669P10 on chromosome
           22q13.31-13.33.  ).
          Length = 1960

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 17/68 (25%), Positives = 26/68 (38%)
 Frame = -1

Query: 822 RIRXXGXAXRGVXAHSPXWSERPTPN*DTYSVSYEKAPRFPKGEGGQVSGKRQGRNRRAH 643
           R+   G   +G     P  ++RP  N      S+   P+     GG   G + G N   H
Sbjct: 616 RVEKPGGQDKGSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNH 675

Query: 642 EGAFQGET 619
            G   G++
Sbjct: 676 NGEGNGQS 683


>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
           factor 20 (AR1, KIAA0292)) protein.
          Length = 1641

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 17/68 (25%), Positives = 26/68 (38%)
 Frame = -1

Query: 822 RIRXXGXAXRGVXAHSPXWSERPTPN*DTYSVSYEKAPRFPKGEGGQVSGKRQGRNRRAH 643
           R+   G   +G     P  ++RP  N      S+   P+     GG   G + G N   H
Sbjct: 372 RVEKPGGQDKGSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNH 431

Query: 642 EGAFQGET 619
            G   G++
Sbjct: 432 NGEGNGQS 439


>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
          Length = 1716

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 17/68 (25%), Positives = 26/68 (38%)
 Frame = -1

Query: 822 RIRXXGXAXRGVXAHSPXWSERPTPN*DTYSVSYEKAPRFPKGEGGQVSGKRQGRNRRAH 643
           R+   G   +G     P  ++RP  N      S+   P+     GG   G + G N   H
Sbjct: 372 RVEKPGGQDKGSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNH 431

Query: 642 EGAFQGET 619
            G   G++
Sbjct: 432 NGEGNGQS 439


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,665,156
Number of Sequences: 237096
Number of extensions: 2496988
Number of successful extensions: 7444
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7444
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)