Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G11
         (907 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052086-1|AAK93510.1|  589|Drosophila melanogaster SD03863p pro...    72   1e-12
AE014297-3508|AAF56268.1|  589|Drosophila melanogaster CG5706-PA...    72   1e-12
Z98254-2|CAB10912.1|  582|Drosophila melanogaster EG:114E2.2 pro...    30   5.0  
AY075354-1|AAL68212.1|  582|Drosophila melanogaster GH28809p pro...    30   5.0  
AE014298-548|AAF45888.2|  595|Drosophila melanogaster CG13316-PB...    30   5.0  
AE014298-547|AAN09101.1|  582|Drosophila melanogaster CG13316-PC...    30   5.0  
AE014298-546|AAF45887.2|  582|Drosophila melanogaster CG13316-PA...    30   5.0  
BT022833-1|AAY55249.1|  178|Drosophila melanogaster IP07416p pro...    29   8.8  
AE014134-386|AAN10421.1|  178|Drosophila melanogaster CG31949-PA...    29   8.8  

>AY052086-1|AAK93510.1|  589|Drosophila melanogaster SD03863p
           protein.
          Length = 589

 Score = 71.7 bits (168), Expect = 1e-12
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = +1

Query: 394 VESQVGSVRPYILCCIIKDLNFTDILFKKFIQMQTRLHDTVCDKRNVATIATHDLNKLPP 573
           ++     +RPY +  +++++ FT   +  FI +Q +LH  +C KR +  I THDL+ L  
Sbjct: 110 IDPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTL-Q 168

Query: 574 GDLVYTAKPPSMLSLIPLMRTKPYTGEQLV 663
           G   Y A  P  +   PL +TK  TG +L+
Sbjct: 169 GPFSYEALAPDQIKFKPLNQTKEMTGSELM 198


>AE014297-3508|AAF56268.1|  589|Drosophila melanogaster CG5706-PA
           protein.
          Length = 589

 Score = 71.7 bits (168), Expect = 1e-12
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = +1

Query: 394 VESQVGSVRPYILCCIIKDLNFTDILFKKFIQMQTRLHDTVCDKRNVATIATHDLNKLPP 573
           ++     +RPY +  +++++ FT   +  FI +Q +LH  +C KR +  I THDL+ L  
Sbjct: 110 IDPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTL-Q 168

Query: 574 GDLVYTAKPPSMLSLIPLMRTKPYTGEQLV 663
           G   Y A  P  +   PL +TK  TG +L+
Sbjct: 169 GPFSYEALAPDQIKFKPLNQTKEMTGSELM 198


>Z98254-2|CAB10912.1|  582|Drosophila melanogaster EG:114E2.2
           protein.
          Length = 582

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 201 SVSH*TNYGLHPRSLPQNRTNSTVIQIQNKKRKERRTSYRKC 326
           S  H T +G   R+   N   +   ++ NK  KERR   ++C
Sbjct: 239 SAHHHTGHGGRRRTTSSNSNGAGTREVHNKLEKERRAQLKEC 280


>AY075354-1|AAL68212.1|  582|Drosophila melanogaster GH28809p
           protein.
          Length = 582

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 201 SVSH*TNYGLHPRSLPQNRTNSTVIQIQNKKRKERRTSYRKC 326
           S  H T +G   R+   N   +   ++ NK  KERR   ++C
Sbjct: 225 SAHHHTGHGGRRRTTSSNSNGAGTREVHNKLEKERRAQLKEC 266


>AE014298-548|AAF45888.2|  595|Drosophila melanogaster CG13316-PB,
           isoform B protein.
          Length = 595

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 201 SVSH*TNYGLHPRSLPQNRTNSTVIQIQNKKRKERRTSYRKC 326
           S  H T +G   R+   N   +   ++ NK  KERR   ++C
Sbjct: 239 SAHHHTGHGGRRRTTSSNSNGAGTREVHNKLEKERRAQLKEC 280


>AE014298-547|AAN09101.1|  582|Drosophila melanogaster CG13316-PC,
           isoform C protein.
          Length = 582

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 201 SVSH*TNYGLHPRSLPQNRTNSTVIQIQNKKRKERRTSYRKC 326
           S  H T +G   R+   N   +   ++ NK  KERR   ++C
Sbjct: 225 SAHHHTGHGGRRRTTSSNSNGAGTREVHNKLEKERRAQLKEC 266


>AE014298-546|AAF45887.2|  582|Drosophila melanogaster CG13316-PA,
           isoform A protein.
          Length = 582

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 201 SVSH*TNYGLHPRSLPQNRTNSTVIQIQNKKRKERRTSYRKC 326
           S  H T +G   R+   N   +   ++ NK  KERR   ++C
Sbjct: 225 SAHHHTGHGGRRRTTSSNSNGAGTREVHNKLEKERRAQLKEC 266


>BT022833-1|AAY55249.1|  178|Drosophila melanogaster IP07416p
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 461 QIYCLKSLYKCKQDCMTPSVI 523
           QI  ++  + CK+DC+TPSV+
Sbjct: 134 QISDMQKFFGCKEDCVTPSVL 154


>AE014134-386|AAN10421.1|  178|Drosophila melanogaster CG31949-PA
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 461 QIYCLKSLYKCKQDCMTPSVI 523
           QI  ++  + CK+DC+TPSV+
Sbjct: 134 QISDMQKFFGCKEDCVTPSVL 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,315,782
Number of Sequences: 53049
Number of extensions: 655958
Number of successful extensions: 1851
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1849
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)