Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G11
         (907 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical ...    89   5e-18
Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical pr...    74   1e-13
Z99281-28|CAB16503.1|  633|Caenorhabditis elegans Hypothetical p...    30   2.0  
AL031632-1|CAA21004.1|  248|Caenorhabditis elegans Hypothetical ...    29   4.6  
U41556-4|AAY44020.2|  260|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z71177-4|CAA94870.1|  529|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AL117203-8|CAB55110.1|  376|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical
           protein Y54E10A.6 protein.
          Length = 507

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
 Frame = +1

Query: 406 VGSVRPYILCCIIK--DLNFTDILFKKFIQMQTRLH-DTVCDKRNVATIATHDLNKLPPG 576
           V  +RPY++CC+I   DLN  D  FKKFI +QT++H   +C+ R ++ I TH L+     
Sbjct: 293 VSEIRPYLVCCVINNVDLNGGDS-FKKFIALQTKMHASALCENRTLSAIGTHRLDSFQL- 350

Query: 577 DLVYTAKPPSMLSLIPLMRTKPYTGEQLVQQLVAEAEALRKEKKRNVYSGIHKYLYLLEG 756
            L Y A P   L +  L +    +  +L+  L+ +AE  RK  KR+    +HKYL++++ 
Sbjct: 351 PLCYMALPKDELYIRALNKKSSVSASELLDSLLRDAELARKRSKRSTVDPLHKYLHIVKD 410

Query: 757 KAVYACL 777
           + + ACL
Sbjct: 411 ENILACL 417


>Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical
           protein F22B5.9 protein.
          Length = 591

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 32/91 (35%), Positives = 54/91 (59%)
 Frame = +1

Query: 391 IVESQVGSVRPYILCCIIKDLNFTDILFKKFIQMQTRLHDTVCDKRNVATIATHDLNKLP 570
           IV+ +   VRP+++  +++D++F    +  FI +Q +LH  +C KR +  I THDL+ + 
Sbjct: 110 IVKKETAQVRPFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTI- 168

Query: 571 PGDLVYTAKPPSMLSLIPLMRTKPYTGEQLV 663
            G   Y A+ P  +   PL +TK YT E+L+
Sbjct: 169 QGPFEYRAEAPKDIKFKPLNQTKEYTAEELM 199


>Z99281-28|CAB16503.1|  633|Caenorhabditis elegans Hypothetical
           protein Y57G11C.1 protein.
          Length = 633

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 632 LINGIRLSIDGGFAVYTRSPGGNLLRSCVAIVATFLLSQT 513
           +INGI LSI+ G  V    P GN   + V+++  F   Q+
Sbjct: 390 VINGINLSIESGKTVALVGPSGNGKSTLVSLIQQFYTPQS 429


>AL031632-1|CAA21004.1|  248|Caenorhabditis elegans Hypothetical
           protein Y32B12B.1 protein.
          Length = 248

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -3

Query: 197 TSFMNRLSDSLFPFKLRSVIHYFYLLIVIS*SLRFRIYSLVAVFKIRSKN 48
           TSF N  S SLFP K  +   +F+  +VIS  +   +Y  V + +  ++N
Sbjct: 68  TSFSNSFS-SLFPAKTTATKTFFFCNLVISNLIAMPVYQSVVIEENGNRN 116


>U41556-4|AAY44020.2|  260|Caenorhabditis elegans Hypothetical
           protein C25B8.8 protein.
          Length = 260

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 475 KKFIQMQTRLHDTVCDKRNVATIATHDLNKLPPGD 579
           K++  M+  +  T C   +V+T+A+   NK+ P D
Sbjct: 9   KEYCNMEKIVSKTACKSSSVSTVASSSKNKMEPTD 43


>Z71177-4|CAA94870.1|  529|Caenorhabditis elegans Hypothetical
           protein AC3.7 protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +1

Query: 520 DKRNVATIATHDLNKLPPGDLVYTAKPPSMLSLIPLMRTKPYTGEQLVQQLVAEAEAL 693
           D   +  I  H   K  P   VY    PS+L+ +P MRTK +  EQ V   + +  AL
Sbjct: 158 DHLKLNIIPMHSSTKSLPS--VYAIGEPSLLNFLPSMRTK-FGTEQTVFDRIGDIIAL 212


>AL117203-8|CAB55110.1|  376|Caenorhabditis elegans Hypothetical
           protein Y48C3A.11 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 530 FLLSQTVSCSLVCICINFLNNISVKFRS 447
           FL+S  +SCS + +CINFL +   KF S
Sbjct: 57  FLIS--MSCSQLALCINFLYSTFFKFMS 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,913,129
Number of Sequences: 27780
Number of extensions: 346080
Number of successful extensions: 1045
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)