Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_G10
(877 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 113 6e-24
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 91 4e-17
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 72 2e-11
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 68 3e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 63 1e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 45 0.003
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 40 0.063
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_UPI00004EBBF8 Cluster: Hypothetical protein MuHV1gpm59;... 37 0.58
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 37 0.77
UniRef50_Q7X651 Cluster: OSJNBb0112E13.9 protein; n=4; Oryza sat... 36 1.0
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.4
UniRef50_A0BC54 Cluster: Chromosome undetermined scaffold_1, who... 36 1.8
UniRef50_UPI000155510B Cluster: PREDICTED: hypothetical protein;... 34 4.1
UniRef50_UPI0000D9B787 Cluster: PREDICTED: hypothetical protein;... 34 4.1
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_UPI0000F2185F Cluster: PREDICTED: hypothetical protein;... 33 7.2
UniRef50_Q98B58 Cluster: Alcohol dehydrogenase; n=8; Alphaproteo... 33 7.2
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.5
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 113 bits (272), Expect = 6e-24
Identities = 68/116 (58%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Frame = +3
Query: 486 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 665
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 666 CPLTGYLSAF--LPSGSVALSH----SSRCRYLSSV*VVPSKLGCVHEPPVQPTAA 815
C L F + ++H S RCR + PS C + PP PTAA
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFA-----PSWAVCTN-PPFSPTAA 111
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +3
Query: 504 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 665
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 90.6 bits (215), Expect = 4e-17
Identities = 43/52 (82%), Positives = 44/52 (84%)
Frame = +3
Query: 510 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 665
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 317 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 415
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = -2
Query: 804 AERGVRAHSPAWRERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AGRVGTGERTRE-LPG 628
AERGVRA+SPAW ERP P+ DT SVSYEKAPRFPKG++ + R G R E G
Sbjct: 24 AERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVS-GKRQGRNRRAHEGAAG 82
Query: 627 GNAWYLYSPVG 595
+ SPVG
Sbjct: 83 EKSPASLSPVG 93
Score = 46.4 bits (105), Expect = 0.001
Identities = 31/92 (33%), Positives = 41/92 (44%)
Frame = -1
Query: 853 PGXTQDDSXXIMSAAVG*TGGSCTQPSLEGTTYTELRYLQREL*ESATLPEGRKADRYPV 674
PG TQDDS ++ G P+ ++ P+G+KA++
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSG 67
Query: 673 SGQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 578
QGRNRRAHEGA+ K SL PPLT
Sbjct: 68 KRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 68.1 bits (159), Expect = 3e-10
Identities = 40/85 (47%), Positives = 44/85 (51%)
Frame = +1
Query: 607 IKIPGVSPWKLPRALSCSDPARLPDTCPPFSLREAWRFLIAHAVGISVRCRSFPPSWAVC 786
+KI VS LP ALSCS+PA PPFSL + + GIS RCRSF PSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 787 TNPPFSRPLRSLSGYYRLESTRVKT 861
NPPFS L TR T
Sbjct: 92 KNPPFSPTAAPYPVTVHLSPTRKST 116
Score = 35.5 bits (78), Expect = 1.8
Identities = 27/79 (34%), Positives = 30/79 (37%)
Frame = +3
Query: 579 VRGGETRQDYKDTRRFPLEAPSCALLFRPCPLTGYLSAFLPSGSVALSHSSRCRYLSSV* 758
VR GETRQD K P P + F +GSVALSHSS +
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 759 VVPSKLGCVHEPPVQPTAA 815
PP PTAA
Sbjct: 83 SFAPSWAVSKNPPFSPTAA 101
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = -1
Query: 559 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAAERP 380
MLVRGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 669 PLTGYLSAFLPSGSVALSHSSRCRYLSSV 755
PLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 9 PLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 293 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 451
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +3
Query: 453 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 632
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 633 EAPSCALLFRP 665
++PS +LLF P
Sbjct: 104 QSPSYSLLFPP 114
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 95 DPDMIRYIDEFGQTTTRMQ 151
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 804 AERGVRAHSPAWRERPTPN 748
AERGVRAHSPAW ERPTPN
Sbjct: 24 AERGVRAHSPAWSERPTPN 42
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 219 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 341
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 40.3 bits (90), Expect = 0.063
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -2
Query: 804 AERGVRAHSPAWRERPTPN*DT 739
AERGV A+SPAW ERPTP+ DT
Sbjct: 24 AERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 363 ERGSGRAPNTQTASPRALADSLMQ 292
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00004EBBF8 Cluster: Hypothetical protein MuHV1gpm59;
n=1; Murid herpesvirus 1|Rep: Hypothetical protein
MuHV1gpm59 - Murid herpesvirus 1
Length = 340
Score = 37.1 bits (82), Expect = 0.58
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 616 PGVSPWKLPRALSCSDPARLPDTCPPFSLREAWRF-LIAHAVGISVRCRSF-PPSWAVCT 789
P +P LPR S S P R+P PP R F + +A ++ R+ PP+
Sbjct: 19 PPQTPPSLPRPPSSSWPPRIPHALPPHPPRNRAHFGQLTYASSWRIKARAGPPPARPARR 78
Query: 790 NPPFSRPLRSLSGYYR 837
+PP S PLR+ + R
Sbjct: 79 SPPGSTPLRTAASDQR 94
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 36.7 bits (81), Expect = 0.77
Identities = 26/94 (27%), Positives = 45/94 (47%)
Frame = -3
Query: 773 LGGNDLHRTEIPTA*AMRKRHASRREKGGQVSGKRAGSEQESARGSFQGETPGIFIVLSG 594
+GG RT P++ ++K E+ + G GS+Q S+ G++P + G
Sbjct: 550 VGGKKKGRTWGPSS-TLQKERVGGEER---LKGLGEGSKQWSSSAPNLGKSPKHTPIAPG 605
Query: 593 FATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 492
FA+ + +F +A GG + +P + P Y S P
Sbjct: 606 FASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
>UniRef50_Q7X651 Cluster: OSJNBb0112E13.9 protein; n=4; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBb0112E13.9 protein -
Oryza sativa subsp. japonica (Rice)
Length = 245
Score = 36.3 bits (80), Expect = 1.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 815 RSGRLNGGFVHTAQLGGNDLHRTEIPT-A*AMRKRHASRREKGGQVSGKRAGSEQESARG 639
R+GR GG + GG RT A +RH +E GG+ R G+ +E+ RG
Sbjct: 134 RAGRRRGGTCEAEEDGGAASRRTGAAARAAGSGRRHGREKEDGGEKWCGRGGAREEAKRG 193
Query: 638 SFQGETP 618
+ E P
Sbjct: 194 QEREEIP 200
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 586 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVITLILWITVLPPL 416
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 415 SELIPL 398
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_A0BC54 Cluster: Chromosome undetermined scaffold_1, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_1,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 493
Score = 35.5 bits (78), Expect = 1.8
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = -3
Query: 827 PDNERSGRLNGGFVHTAQLGGNDLHRTEIPTA*AMRKRHASRREKGGQVSGKRAGSEQES 648
P N RS GG + Q GG+ + P + R +G G+ GSE S
Sbjct: 266 PQNSRSFSAQGGQRNNKQFGGDSHSQERKPFGGRGKSFGGENRSEGNSFRGRGRGSENRS 325
Query: 647 ARGSFQGETPG 615
SF+G G
Sbjct: 326 EGNSFRGRGRG 336
>UniRef50_UPI000155510B Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 264
Score = 34.3 bits (75), Expect = 4.1
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +1
Query: 646 ALSCSDPARLPDTCPPFSLREAWRFLIAHAVGISVRCRSFPPSWAV 783
ALS A LP C P L E R A A + C PP WAV
Sbjct: 135 ALSVLPAASLPALCQPGDLLELLRLRPAAAAAAAAACPDDPPHWAV 180
>UniRef50_UPI0000D9B787 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 185
Score = 34.3 bits (75), Expect = 4.1
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -2
Query: 798 RGVRAHSPAWRERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AGRVGTGERTRELPG 628
R R+HS A R P N DT+ KAPR P R+T +R G +G +++ PG
Sbjct: 63 RPARSHSSAERPLPLQNVDTH-----KAPRIPTQRRKTCLR-GGEMGNCPWSQQSPG 113
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 253 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 89
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI0000F2185F Cluster: PREDICTED: hypothetical protein; n=2;
Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
rerio
Length = 12610
Score = 33.5 bits (73), Expect = 7.2
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +1
Query: 613 IPGVSPWKLPRALSCSDPARLPDTCPPFSLREAWRFLIAHAVGISVRCRSFPPSWAVCTN 792
+P +SP P S ++P LP T PP +L A A S S PS T
Sbjct: 11793 VPSISPTTAPPTTSSTEPPMLPYTMPPTALNTATAIAPPTA---SPTMPSITPSTVPPTA 11849
Query: 793 PPFSRP 810
PP + P
Sbjct: 11850 PPTTAP 11855
>UniRef50_Q98B58 Cluster: Alcohol dehydrogenase; n=8;
Alphaproteobacteria|Rep: Alcohol dehydrogenase -
Rhizobium loti (Mesorhizobium loti)
Length = 408
Score = 33.5 bits (73), Expect = 7.2
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 586 VAKPDRTIKIPGVSPWKLPRALSCSDPARLPDTCPPFSLREAWRFLIAHAV-GISVRCRS 762
++ PDRT+K+ G+S L A++ DP L TCPP A + HA+ + + R
Sbjct: 152 ISDPDRTLKV-GISSPYLIAAVALCDP-ELTMTCPPALTAIAGADALTHAIEAFTAKQRG 209
Query: 763 FPPSWA 780
PS A
Sbjct: 210 EDPSLA 215
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 208 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 47
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.5
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 559 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAA 389
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 863,760,488
Number of Sequences: 1657284
Number of extensions: 18418889
Number of successful extensions: 51782
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 48977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51738
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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