Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_G07
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 169 2e-42
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 119 2e-27
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 119 2e-27
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 119 2e-27
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 104 7e-23
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 104 7e-23
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 104 7e-23
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 104 7e-23
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 96 3e-20
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 96 3e-20
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 96 3e-20
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 62 7e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 62 7e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 62 7e-10
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 62 7e-10
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 62 7e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 62 7e-10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 58 9e-09
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 57 2e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 56 3e-08
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 55 8e-08
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 54 2e-07
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 54 2e-07
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 54 2e-07
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 54 2e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 49 4e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 48 9e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 48 9e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 48 9e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 47 2e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 5e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 46 5e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 46 5e-05
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 45 8e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 45 8e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 8e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 45 8e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 45 8e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 43 3e-04
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 42 6e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 42 8e-04
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 42 8e-04
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.002
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 40 0.003
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 40 0.003
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 40 0.003
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 40 0.003
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 40 0.003
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 40 0.003
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 40 0.003
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 38 0.007
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 38 0.007
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.010
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.010
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 37 0.022
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 37 0.022
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 37 0.022
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 37 0.022
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 36 0.030
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 35 0.069
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 35 0.091
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 35 0.091
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.16
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 34 0.16
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 34 0.16
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 34 0.16
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.16
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.16
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.16
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 33 0.28
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.48
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.48
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.48
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 32 0.48
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 32 0.64
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.64
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.64
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 32 0.64
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 31 1.5
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.6
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 30 2.6
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 29 3.4
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 4.5
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 169 bits (411), Expect = 2e-42
Identities = 77/170 (45%), Positives = 114/170 (67%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLV 372
+ GK+F+GGLSW+T+ ENL+ YF R+GEV +C+VM++ + R+RGFGF+TF DPS V+ V
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 373 LQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVM 552
L N H+LDG+ IDPK P+ Q K KVF+GGL + T D++ +F YGKV
Sbjct: 103 LNNREHELDGKKIDPKVAFPKRTQ-AKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVE 161
Query: 553 EVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXRAXP 702
+ ++M+D+ ++ RGFGF++F+ + V + HF +NG VE +A P
Sbjct: 162 DAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQP 211
Score = 67.7 bits (158), Expect = 1e-11
Identities = 29/83 (34%), Positives = 53/83 (63%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
K+F+GGLS ++ E++++YF YG+V D ++M + + R RGFGFVTF + + V +
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 382 GPHQLDGRTIDPKPCNPRTLQKP 450
H+++G+ ++ K P+ + P
Sbjct: 195 HFHEINGKMVECKKAQPKEVMLP 217
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 169 bits (411), Expect = 2e-42
Identities = 77/170 (45%), Positives = 114/170 (67%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLV 372
+ GK+F+GGLSW+T+ ENL+ YF R+GEV +C+VM++ + R+RGFGF+TF DPS V+ V
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 373 LQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVM 552
L N H+LDG+ IDPK P+ Q K KVF+GGL + T D++ +F YGKV
Sbjct: 103 LNNREHELDGKKIDPKVAFPKRTQ-AKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVE 161
Query: 553 EVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXRAXP 702
+ ++M+D+ ++ RGFGF++F+ + V + HF +NG VE +A P
Sbjct: 162 DAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQP 211
Score = 67.7 bits (158), Expect = 1e-11
Identities = 29/83 (34%), Positives = 53/83 (63%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
K+F+GGLS ++ E++++YF YG+V D ++M + + R RGFGFVTF + + V +
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 382 GPHQLDGRTIDPKPCNPRTLQKP 450
H+++G+ ++ K P+ + P
Sbjct: 195 HFHEINGKMVECKKAQPKEVMLP 217
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 119 bits (287), Expect = 2e-27
Identities = 56/172 (32%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +1
Query: 181 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 360
++ + K+FVGGL+ T+ + ++ ++S++GE+ D +VM++ + RSRGFGFVTF+ +
Sbjct: 17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTE 76
Query: 361 VNLVLQNGPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGR 537
V+ ++ PH +DG+T+DPK PR + + ++++ G+ + TE L +F +
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 136
Query: 538 YGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXR 693
YG V + I+ D+ +K RGFGF++F+D SV +NG + ++ +
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+GGL SN T+ +R F+ ++G++ ++++M D K+SRGFGF++F + V +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 652 HFINLNGXQVEIXRAXP 702
++G V+ RA P
Sbjct: 84 RPHIIDGKTVDPKRAVP 100
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 119 bits (287), Expect = 2e-27
Identities = 56/172 (32%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +1
Query: 181 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 360
++ + K+FVGGL+ T+ + ++ ++S++GE+ D +VM++ + RSRGFGFVTF+ +
Sbjct: 17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTE 76
Query: 361 VNLVLQNGPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGR 537
V+ ++ PH +DG+T+DPK PR + + ++++ G+ + TE L +F +
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 136
Query: 538 YGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXR 693
YG V + I+ D+ +K RGFGF++F+D SV +NG + ++ +
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+GGL SN T+ +R F+ ++G++ ++++M D K+SRGFGF++F + V +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 652 HFINLNGXQVEIXRAXP 702
++G V+ RA P
Sbjct: 84 RPHIIDGKTVDPKRAVP 100
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 119 bits (287), Expect = 2e-27
Identities = 56/172 (32%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +1
Query: 181 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 360
++ + K+FVGGL+ T+ + ++ ++S++GE+ D +VM++ + RSRGFGFVTF+ +
Sbjct: 17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTE 76
Query: 361 VNLVLQNGPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGR 537
V+ ++ PH +DG+T+DPK PR + + ++++ G+ + TE L +F +
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 136
Query: 538 YGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXR 693
YG V + I+ D+ +K RGFGF++F+D SV +NG + ++ +
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+GGL SN T+ +R F+ ++G++ ++++M D K+SRGFGF++F + V +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 652 HFINLNGXQVEIXRAXP 702
++G V+ RA P
Sbjct: 84 RPHIIDGKTVDPKRAVP 100
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 104 bits (250), Expect = 7e-23
Identities = 49/150 (32%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = +1
Query: 247 LQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPC 426
++ ++S++GE+ D +VM++ + RSRGFGFVTF+ + V+ ++ PH +DG+T+DPK
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 427 NPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFG 603
PR + + ++++ G+ + TE L +F +YG V + I+ D+ +K RGFG
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 604 FLSFEDEISVXXVTQXHFINLNGXQVEIXR 693
F++F+D SV +NG + ++ +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 150
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+L+V G+ + +++ L YF++YG V ++ + + + RGFGFVTF D V+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 382 GPHQLDGRTID 414
H ++G D
Sbjct: 137 KSHMVNGHRCD 147
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +1
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXRA 696
+R F+ ++G++ ++++M D K+SRGFGF++F + V + ++G V+ RA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 697 XP 702
P
Sbjct: 61 VP 62
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 104 bits (250), Expect = 7e-23
Identities = 49/150 (32%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = +1
Query: 247 LQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPC 426
++ ++S++GE+ D +VM++ + RSRGFGFVTF+ + V+ ++ PH +DG+T+DPK
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 427 NPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFG 603
PR + + ++++ G+ + TE L +F +YG V + I+ D+ +K RGFG
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 604 FLSFEDEISVXXVTQXHFINLNGXQVEIXR 693
F++F+D SV +NG + ++ +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 150
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+L+V G+ + +++ L YF++YG V ++ + + + RGFGFVTF D V+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 382 GPHQLDGRTID 414
H ++G D
Sbjct: 137 KSHMVNGHRCD 147
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +1
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXRA 696
+R F+ ++G++ ++++M D K+SRGFGF++F + V + ++G V+ RA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 697 XP 702
P
Sbjct: 61 VP 62
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 104 bits (250), Expect = 7e-23
Identities = 58/171 (33%), Positives = 91/171 (53%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 369
+E K+FVGG+S E + E+L +F++YGEV V + +GRSRGF FV F L
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 370 VLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKV 549
L + G++++ KP R + KVF+GGLPS+ +E DLR F ++GKV
Sbjct: 86 ALAAREQTIKGKSVEVKPAKSRENK---------KVFVGGLPSDYSEQDLRSHFEQFGKV 136
Query: 550 MEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXRAXP 702
++ +D++ K R F F+ FE+E S + + ++ +A P
Sbjct: 137 DDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVP 187
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 454 RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISV 633
+G K+F+GG+ V DL F +YG+V + + YD+ +SRGF F+ F
Sbjct: 24 KGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGC 83
Query: 634 XXVTQXHFINLNGXQVEIXRA 696
+ G VE+ A
Sbjct: 84 KLALAAREQTIKGKSVEVKPA 104
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +1
Query: 163 AV*IRDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 342
+V ++ E K+FVGGL + S+++L+ +F ++G+V D + ++ R F F+
Sbjct: 98 SVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIV 157
Query: 343 FADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYP 471
F + + R D K P+ + P G P
Sbjct: 158 FEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGRMP 200
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 104 bits (250), Expect = 7e-23
Identities = 58/171 (33%), Positives = 91/171 (53%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 369
+E K+FVGG+S E + E+L +F++YGEV V + +GRSRGF FV F L
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 370 VLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKV 549
L + G++++ KP R + KVF+GGLPS+ +E DLR F ++GKV
Sbjct: 86 ALAAREQTIKGKSVEVKPAKSRENK---------KVFVGGLPSDYSEQDLRSHFEQFGKV 136
Query: 550 MEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXRAXP 702
++ +D++ K R F F+ FE+E S + + ++ +A P
Sbjct: 137 DDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVP 187
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 454 RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISV 633
+G K+F+GG+ V DL F +YG+V + + YD+ +SRGF F+ F
Sbjct: 24 KGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGC 83
Query: 634 XXVTQXHFINLNGXQVEIXRA 696
+ G VE+ A
Sbjct: 84 KLALAAREQTIKGKSVEVKPA 104
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +1
Query: 163 AV*IRDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 342
+V ++ E K+FVGGL + S+++L+ +F ++G+V D + ++ R F F+
Sbjct: 98 SVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIV 157
Query: 343 FADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYP 471
F + + R D K P+ + P G P
Sbjct: 158 FEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGRMP 200
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 95.9 bits (228), Expect = 3e-20
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
KLF+GGLS +T+ E L YFS++G V+D +V+++ + SRGFGFVTFA + +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 382 GPHQLDGRTIDPKPCNPR----TLQKPKRGGGYP----KVFLGGLPSNVTETD-LRVFFG 534
PH+L G+T+D K PR ++ P P K+ L G+ + V D LRV+F
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 535 RYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXV----TQXHFINLNGXQVEIXRAXP 702
+G + +V I+ + RG GF+ +ED+ S + H +N +V + P
Sbjct: 170 TFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 224
Query: 703 XXGSXXXR 726
+ R
Sbjct: 225 NGSTYWKR 232
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 95.9 bits (228), Expect = 3e-20
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
KLF+GGLS +T+ E L YFS++G V+D +V+++ + SRGFGFVTFA + +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 382 GPHQLDGRTIDPKPCNPR----TLQKPKRGGGYP----KVFLGGLPSNVTETD-LRVFFG 534
PH+L G+T+D K PR ++ P P K+ L G+ + V D LRV+F
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 535 RYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXV----TQXHFINLNGXQVEIXRAXP 702
+G + +V I+ + RG GF+ +ED+ S + H +N +V + P
Sbjct: 190 TFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 244
Query: 703 XXGSXXXR 726
+ R
Sbjct: 245 NGSTYWKR 252
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 95.9 bits (228), Expect = 3e-20
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
KLF+GGLS +T+ E L YFS++G V+D +V+++ + SRGFGFVTFA + +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 382 GPHQLDGRTIDPKPCNPR----TLQKPKRGGGYP----KVFLGGLPSNVTETD-LRVFFG 534
PH+L G+T+D K PR ++ P P K+ L G+ + V D LRV+F
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 535 RYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXV----TQXHFINLNGXQVEIXRAXP 702
+G + +V I+ + RG GF+ +ED+ S + H +N +V + P
Sbjct: 191 TFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 245
Query: 703 XXGSXXXR 726
+ R
Sbjct: 246 NGSTYWKR 253
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 77.4 bits (182), Expect = 1e-14
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 366
D + L V G+ ++T+ E Q+YF G V+ C + + S+ G S+GFGFV + N
Sbjct: 169 DSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQN 227
Query: 367 LVLQNGPHQLDGRTIDPKPCNPRTLQ-KPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYG 543
VL H +DGR D K + R Q +P ++F+G L V E LR FG
Sbjct: 228 KVLAIPQHMIDGRRCDVKVPDGRDKQGRP----SISRIFVGRLTDKVDEHQLRKVFGDEA 283
Query: 544 K-VMEVVIMYDQEXKKS-RGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXRAXP 702
K +E ++ D K RGF F++ + + + +NG V + A P
Sbjct: 284 KSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQP 338
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGE-VIDCVVMKNSESGRS-RGFGFVTFADPSLVNLVL 375
++FVG L+ + + L++ F + I+ V+ + + RGF FVT + ++
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIV 319
Query: 376 QNGPHQLDGRTIDPKPCNPRTLQKPKRGGGY 468
G ++G ++ PR G Y
Sbjct: 320 SKGSLTVNGLSVGLSIAQPREENNQSVGPDY 350
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 62.5 bits (145), Expect = 4e-10
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 199 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 378
G +F+ L +++ FS +G ++ C V + E G S+G+GFV F ++
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIE 203
Query: 379 --NGPHQLDGRTIDPK--PCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGK 546
NG D + K P R + + G Y VF+ ++ + L F ++G+
Sbjct: 204 KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGE 263
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFEDE 624
+ V+M D + K +GFGF++F D+
Sbjct: 264 ITSAVVMTDAQGKP-KGFGFVAFADQ 288
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN- 381
+FV QE L FS++GE+ VVM +++ G+ +GFGFV FAD ++
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 382 GPHQLDGRTIDPKPC-----NPRTLQ--------KPKRGGGYPKV--FLGGLPSNVTETD 516
L+G C + R+ + K +R Y V ++ + ++ +
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFE 618
LR F +G + +M D E +S+GFGF+ FE
Sbjct: 359 LRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 47.6 bits (108), Expect = 1e-05
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
L++G L + S+ L FS G V+ V +++ S S G+ +V F P+ L
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT- 117
Query: 385 PHQLDGRTIDPKPCNPRTLQKPK--RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEV 558
++ I +P Q+ R G +F+ L + + F +G ++
Sbjct: 118 ---MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC 174
Query: 559 VIMYDQEXKKSRGFGFLSFEDEIS 630
+ D E S+G+GF+ FE E S
Sbjct: 175 KVATDDEGN-SKGYGFVHFETEHS 197
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
L+V + + + + L+ +FS +G + VM + E+GRS+GFGFV F P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKP 393
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 62.5 bits (145), Expect = 4e-10
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 199 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 378
G +F+ L +++ FS +G ++ C V + E G S+G+GFV F ++
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIE 203
Query: 379 --NGPHQLDGRTIDPK--PCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGK 546
NG D + K P R + + G Y VF+ ++ + L F ++G+
Sbjct: 204 KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGE 263
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFEDE 624
+ V+M D + K +GFGF++F D+
Sbjct: 264 ITSAVVMTDAQGKP-KGFGFVAFADQ 288
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN- 381
+FV QE L FS++GE+ VVM +++ G+ +GFGFV FAD ++
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 382 GPHQLDGRTIDPKPC-----NPRTLQ--------KPKRGGGYPKV--FLGGLPSNVTETD 516
L+G C + R+ + K +R Y V ++ + ++ +
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFE 618
LR F +G + +M D E +S+GFGF+ FE
Sbjct: 359 LRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 47.6 bits (108), Expect = 1e-05
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
L++G L + S+ L FS G V+ V +++ S S G+ +V F P+ L
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT- 117
Query: 385 PHQLDGRTIDPKPCNPRTLQKPK--RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEV 558
++ I +P Q+ R G +F+ L + + F +G ++
Sbjct: 118 ---MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC 174
Query: 559 VIMYDQEXKKSRGFGFLSFEDEIS 630
+ D E S+G+GF+ FE E S
Sbjct: 175 KVATDDEGN-SKGYGFVHFETEHS 197
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
L+V + + + + L+ +FS +G + VM + E+GRS+GFGFV F P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKP 393
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 61.7 bits (143), Expect = 7e-10
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF------- 345
D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 346 -ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
A +L N+ + G H + KP + T + +R K+F+G L E +LR
Sbjct: 111 EAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHNEENLR 159
Query: 523 VFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQ 648
F ++G + + ++ DQ+ KSRG F++F + T+
Sbjct: 160 EIFAKFGHIEDCSVLRDQDG-KSRGCAFVTFTNRSCAVVATK 200
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/60 (40%), Positives = 42/60 (70%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 357
D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FVTF + S
Sbjct: 135 DTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRS 193
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 454 RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
+G +F+ LP + ++DL F +G ++ + D+ S+ FGF+S+E+
Sbjct: 494 KGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 61.7 bits (143), Expect = 7e-10
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF------- 345
D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 346 -ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
A +L N+ + G H + KP + T + +R K+F+G L E +LR
Sbjct: 111 EAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHNEENLR 159
Query: 523 VFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQ 648
F ++G + + ++ DQ+ KSRG F++F + T+
Sbjct: 160 EIFAKFGHIEDCSVLRDQDG-KSRGCAFVTFTNRSCAVVATK 200
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/60 (40%), Positives = 42/60 (70%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 357
D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FVTF + S
Sbjct: 135 DTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRS 193
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 454 RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
+G +F+ LP + ++DL F +G ++ + D+ S+ FGF+S+E+
Sbjct: 494 KGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 61.7 bits (143), Expect = 7e-10
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF------- 345
D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 346 -ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
A +L N+ + G H + KP + T + +R K+F+G L E +LR
Sbjct: 111 EAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHNEENLR 159
Query: 523 VFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQ 648
F ++G + + ++ DQ+ KSRG F++F + T+
Sbjct: 160 EIFAKFGHIEDCSVLRDQDG-KSRGCAFVTFTNRSCAVVATK 200
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/60 (40%), Positives = 42/60 (70%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 357
D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FVTF + S
Sbjct: 135 DTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRS 193
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 454 RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
+G +F+ LP + ++DL F +G ++ + D+ S+ FGF+S+E+
Sbjct: 423 KGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 478
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 61.7 bits (143), Expect = 7e-10
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF------- 345
D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 346 -ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
A +L N+ + G H + KP + T + +R K+F+G L E +LR
Sbjct: 111 EAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHNEENLR 159
Query: 523 VFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQ 648
F ++G + + ++ DQ+ KSRG F++F + T+
Sbjct: 160 EIFAKFGHIEDCSVLRDQDG-KSRGCAFVTFTNRSCAVVATK 200
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/60 (40%), Positives = 42/60 (70%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 357
D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FVTF + S
Sbjct: 135 DTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRS 193
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 61.7 bits (143), Expect = 7e-10
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF------- 345
D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 346 -ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
A +L N+ + G H + KP + T + +R K+F+G L E +LR
Sbjct: 111 EAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHNEENLR 159
Query: 523 VFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQ 648
F ++G + + ++ DQ+ KSRG F++F + T+
Sbjct: 160 EIFAKFGHIEDCSVLRDQDG-KSRGCAFVTFTNRSCAVVATK 200
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/60 (40%), Positives = 42/60 (70%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 357
D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FVTF + S
Sbjct: 135 DTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRS 193
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 61.7 bits (143), Expect = 7e-10
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF------- 345
D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 346 -ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
A +L N+ + G H + KP + T + +R K+F+G L E +LR
Sbjct: 111 EAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHNEENLR 159
Query: 523 VFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQ 648
F ++G + + ++ DQ+ KSRG F++F + T+
Sbjct: 160 EIFAKFGHIEDCSVLRDQDG-KSRGCAFVTFTNRSCAVVATK 200
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/60 (40%), Positives = 42/60 (70%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 357
D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FVTF + S
Sbjct: 135 DTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRS 193
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 454 RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
+G +F+ LP + ++DL F +G ++ + D+ S+ FGF+S+E+
Sbjct: 494 KGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 58.0 bits (134), Expect = 9e-09
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
K+FVGGL + TS + L YF ++G++ + VV+ + + +SRG+GFVT D + ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 382 GPHQLDGR 405
+DGR
Sbjct: 96 PNPIIDGR 103
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/102 (26%), Positives = 52/102 (50%)
Frame = +1
Query: 466 YPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVT 645
+ K+F+GGLP + ++ L +F ++G + E V++ D+ +KSRG+GF++ +D S
Sbjct: 34 FTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERAC 93
Query: 646 QXHFINLNGXQVEIXRAXPXXGSXXXRGXEAAXXAXGXXXXP 771
+ ++G + + A G+ + A A G P
Sbjct: 94 KDPNPIIDGRKANVNLA--YLGAKPRTNVQLAALAAGQVQLP 133
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFA-DPSLVN 366
+ K L + L +QE ++ F+ GE+ C ++++ +G+S G+GFV + + +
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 367 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGK 546
V +L +TI P Q +G +++ G+P ++T +L F +G+
Sbjct: 99 AVSSFNGLRLQNKTIKVSYARPSNDQ--IKGS---NLYVSGIPKSMTLHELESIFRPFGQ 153
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFE--DEISVXXVT 645
++ I+ D S+G GF+ F+ DE V T
Sbjct: 154 IITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 175 RDMDDDEKGK-LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
R +D KG L+V G+ + L+ F +G++I ++ ++ +G S+G GFV F
Sbjct: 119 RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 56.4 bits (130), Expect = 3e-08
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF------- 345
D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 346 -ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
A +L N+ + G H + KP + T + +R K+F+G L E +LR
Sbjct: 111 EAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHNEENLR 159
Query: 523 VFFGRYGKVMEVVIMYDQEXKKSRG 597
F ++G + + ++ DQ+ KSRG
Sbjct: 160 EIFAKFGHIEDCSVLRDQDG-KSRG 183
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRG 327
D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG
Sbjct: 135 DTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRG 183
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
K+F+G +P ETD R F +YG V I+ D+ + S+G F++F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 55.2 bits (127), Expect = 6e-08
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ-- 378
LFV L + E L F++ G V+ ++ G + + FV F+D + L LQ
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHNQATLALQSH 98
Query: 379 NGPHQLDGR---TIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKV 549
NG L+ T +P P + + VF+G L S + T LR F ++G+V
Sbjct: 99 NGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEV 158
Query: 550 MEVVIMYDQEXKKSRGFGFLSF 615
E I+ D K +G+GF+S+
Sbjct: 159 SEAKIIRDNNTNKGKGYGFVSY 180
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
+++ + W T + L+ YF RYG + + + ++G RGF +TF N ++
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
Query: 385 PHQLDGRTIDPKPCNPRTLQKPKR 456
PH +DG +D +P P + K+
Sbjct: 87 PHVIDGDRVDVEPYIPLISKNKKK 110
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +1
Query: 445 KPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
+PK G V+L + ++ L +F RYG + V + YD + RGF ++F+ +
Sbjct: 19 RPKNTG--QTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 625 ISVXXVTQXHFINLNGXQVEIXRAXP 702
+ ++G +V++ P
Sbjct: 77 DGANKAIEQRPHVIDGDRVDVEPYIP 102
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Frame = +1
Query: 235 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN-GPHQLDGRTI 411
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q ++G +
Sbjct: 225 NKETLEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDL 282
Query: 412 DPKPCNPRTLQ-------------KPKRGGGYPKV--FLGGLPSNVTETDLRVFFGRYGK 546
C + K +R Y V ++ L V + L+ F YG
Sbjct: 283 KLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGN 342
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFE 618
+ +M D E +S+GFGF+ FE
Sbjct: 343 ITSAKVMTD-ENGRSKGFGFVCFE 365
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +1
Query: 199 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-ADPSLVNLVL 375
G +F+ L +++ FS +G ++ C V + E G S+G+GFV F + + N +
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQ 178
Query: 376 QNGPHQLDGRTIDPKPCNPRTLQKPKRG---GGYPKVFLGGLPSNVTETDLRVFFGRYGK 546
+ L G+ + PR + + G + V++ + + L F ++G
Sbjct: 179 KVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGN 238
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFED-EISVXXVTQXHFINLNGXQVEI 687
+ +M + KS+GFGF++F + E + V H + G +++
Sbjct: 239 ITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKL 284
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 367
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Frame = +1
Query: 235 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN-GPHQLDGRTI 411
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q ++G +
Sbjct: 165 NKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDL 222
Query: 412 DPKPCNPR-------------TLQKPKRGGGYPKV--FLGGLPSNVTETDLRVFFGRYGK 546
C + K +R Y V ++ L V + L+ F YG
Sbjct: 223 KLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGN 282
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFE 618
+ +M D E +S+GFGF+ FE
Sbjct: 283 ITSAKVMTD-ENGRSKGFGFVCFE 305
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 307
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Frame = +1
Query: 235 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN-GPHQLDGRTI 411
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q ++G +
Sbjct: 162 NKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDL 219
Query: 412 DPKPCNPRTLQ-------------KPKRGGGYPKV--FLGGLPSNVTETDLRVFFGRYGK 546
C + K +R Y V ++ L V + L+ F YG
Sbjct: 220 KLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGN 279
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFE 618
+ +M D E +S+GFGF+ FE
Sbjct: 280 ITSAKVMTD-ENGRSKGFGFVCFE 302
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +1
Query: 199 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-ADPSLVNLVL 375
G +F+ L +++ FS +G ++ C V + E G S+G+GFV F + + N +
Sbjct: 57 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQ 115
Query: 376 QNGPHQLDGRTIDPKPCNPRTLQKPKRG---GGYPKVFLGGLPSNVTETDLRVFFGRYGK 546
+ L G+ + PR + + G + V++ + + L F ++G
Sbjct: 116 KVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGN 175
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFED-EISVXXVTQXHFINLNGXQVEI 687
+ +M + KS+GFGF++F + E + V H + G +++
Sbjct: 176 ITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKL 221
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 304
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Frame = +1
Query: 235 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN-GPHQLDGRTI 411
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q ++G +
Sbjct: 225 NKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDL 282
Query: 412 DPKPCNPRTLQ-------------KPKRGGGYPKV--FLGGLPSNVTETDLRVFFGRYGK 546
C + K +R Y V ++ L V + L+ F YG
Sbjct: 283 KLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGN 342
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFE 618
+ +M D E +S+GFGF+ FE
Sbjct: 343 ITSAKVMTD-ENGRSKGFGFVCFE 365
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +1
Query: 199 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-ADPSLVNLVL 375
G +F+ L +++ FS +G ++ C V + E G S+G+GFV F + + N +
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQ 178
Query: 376 QNGPHQLDGRTIDPKPCNPRTLQKPKRG---GGYPKVFLGGLPSNVTETDLRVFFGRYGK 546
+ L G+ + PR + + G + V++ + + L F ++G
Sbjct: 179 KVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGN 238
Query: 547 VMEVVIMYDQEXKKSRGFGFLSFED-EISVXXVTQXHFINLNGXQVEI 687
+ +M + KS+GFGF++F + E + V H + G +++
Sbjct: 239 ITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKL 284
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 367
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/77 (27%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 184 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 363
+D + +FVG +S++ S++ ++ FS+ G V+ ++ + E+G+ +G+GF+ F D
Sbjct: 13 NDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTA 72
Query: 364 NLVLQN-GPHQLDGRTI 411
+ ++N ++L GR +
Sbjct: 73 EVAIRNLNGYELSGRIL 89
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXH 654
VF+G + +V+E +R F + G V+ + +++D+E K +G+GF+ F D +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPD----IQTAEVA 75
Query: 655 FINLNGXQV 681
NLNG ++
Sbjct: 76 IRNLNGYEL 84
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 52.4 bits (120), Expect = 4e-07
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Frame = +1
Query: 181 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD-PS 357
+D + +FVG LS + S E L+ F+++GEV + V+++ ++ +S+G+GFV+F + +
Sbjct: 129 IDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQN 188
Query: 358 LVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVF-----------LGGLPSNV 504
N + + R + + ++ + + +VF +G +
Sbjct: 189 AENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQT 248
Query: 505 TETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFE-DEISVXXVTQXHFINLNGXQV 681
T+ DLR F YG + EV I K++ + F+ +E E + + + + + G QV
Sbjct: 249 TDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKAIMEMNGKEMAGNQV 302
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 51.2 bits (117), Expect = 1e-06
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
+FVG LS E + L+ F +G+V D V++++ + +S+G+GFV++ ++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 385 PHQ-LDGRTIDPK--PCNPRTLQKP-------------KRGGGYPKVFLGGLPSNVTETD 516
Q L RTI P +KP + G V++G + S +TE +
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
+R F +G++ EV I K +G+ F+ F+++
Sbjct: 143 IRQGFASFGRITEVRIF------KMQGYAFVKFDNK 172
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 51.2 bits (117), Expect = 1e-06
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
+FVG LS E + L+ F +G+V D V++++ + +S+G+GFV++ ++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 385 PHQ-LDGRTIDPK--PCNPRTLQKP-------------KRGGGYPKVFLGGLPSNVTETD 516
Q L RTI P +KP + G V++G + S +TE +
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
+R F +G++ EV I K +G+ F+ F+++
Sbjct: 153 IRQGFASFGRITEVRIF------KMQGYAFVKFDNK 182
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 51.2 bits (117), Expect = 1e-06
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
+FVG LS E + L+ F +G+V D V++++ + +S+G+GFV++ ++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 385 PHQ-LDGRTIDPK--PCNPRTLQKP-------------KRGGGYPKVFLGGLPSNVTETD 516
Q L RTI P +KP + G V++G + S +TE +
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
+R F +G++ EV I K +G+ F+ F+++
Sbjct: 224 IRQGFASFGRITEVRIF------KMQGYAFVKFDNK 253
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 49.6 bits (113), Expect = 3e-06
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 369
DE L+VG L +++ + F++ G V V+ + G + + FV F+D +
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQ 99
Query: 370 VLQ--NGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYG 543
LQ N LD P Q + VF+G L S V LR F +G
Sbjct: 100 ALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFG 159
Query: 544 KVMEVVIMYDQEXKKSRGFGFLSF 615
V + ++ D KS+G+GF+S+
Sbjct: 160 DVSDAKVIRDTNTTKSKGYGFVSY 183
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEIS-VXXVTQX 651
+++GGL ++E D+ F +YG+VM + ++ D++ KS+GF FL ++D+ S + V
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 652 HFINLNGXQVEI 687
+ I+L+ + +
Sbjct: 100 NGISLHKRMIRV 111
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/59 (32%), Positives = 40/59 (67%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+++GGLS+ S+ ++ FS+YGEV++ ++++ ++G+S+GF F+ + D L + N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 366
+D LFVG +++ETS+ L+R F YG+ I + M + E+G+ RG+ F+ ++D + ++
Sbjct: 100 EDPYRTLFVGRINYETSESKLRREFEAYGK-IKKLTMVHDEAGKPRGYAFIEYSDKAEMH 158
Query: 367 LVLQNGPH-QLDGR--TIDPKPCNPRTLQKPKRGGG 465
+ ++DG+ +D + + P+R GG
Sbjct: 159 TAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGG 194
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 427 NPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGF 606
NPR + P Y +F+G + +E+ LR F YGK+ ++ +++D E K RG+ F
Sbjct: 95 NPRASEDP-----YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAF 148
Query: 607 LSFEDE 624
+ + D+
Sbjct: 149 IEYSDK 154
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISV-XXVTQX 651
V++G P TE DL +F + G V V I+ D+E + RGF F+ F +E + V Q
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 652 HFINLNGXQVEIXRA 696
+ ++ NG + + A
Sbjct: 66 NGVDFNGRALRVNLA 80
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 351
++VG ++T++++L YFS+ G V + ++ + E+GR RGF FV F +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 48.0 bits (109), Expect = 9e-06
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+++VG +S+E ++ L+R F +G + + + +G + F FV + P L ++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 382 GPHQ-LDGRTIDPKPCNPRTLQKP--------------KRGGGYPKVFLGGLPSNVTETD 516
Q L GR + + ++ P K Y +V++ + +++ETD
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
L+ F +G++++ + + RGFG+L F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 48.0 bits (109), Expect = 9e-06
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+++VG +S+E ++ L+R F +G + + + +G + F FV + P L ++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 382 GPHQ-LDGRTIDPKPCNPRTLQKP--------------KRGGGYPKVFLGGLPSNVTETD 516
Q L GR + + ++ P K Y +V++ + +++ETD
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
L+ F +G++++ + + RGFG+L F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 48.0 bits (109), Expect = 9e-06
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+++VG +S+E ++ L+R F +G + + + +G + F FV + P L ++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 382 GPHQ-LDGRTIDPKPCNPRTLQKP--------------KRGGGYPKVFLGGLPSNVTETD 516
Q L GR + + ++ P K Y +V++ + +++ETD
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 517 LRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
L+ F +G++++ + + RGFG+L F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISV-XXVTQX 651
V++G +P TE ++ +F G V V I+YD+E + RGF F+ F +E V Q
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 652 HFINLNGXQVEIXRA 696
+ + NG + + A
Sbjct: 68 NGVAFNGRNLRVNYA 82
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 351
++VG + ++ ++E + YF+ G V + ++ + E+GR RGF FV F++
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 47.2 bits (107), Expect = 2e-05
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Frame = +1
Query: 181 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 360
++ ++ ++VGGL + S+ L + G V+ + K+ + +GFGFV F
Sbjct: 7 VERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEED 66
Query: 361 VNLVLQ-NGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGR 537
+ ++ +L G+ P N + + G +F+G L V E L F
Sbjct: 67 ADYAIKILNMIKLYGK---PIKVNKASAHEKNMDVG-ANIFVGNLDPEVDEKLLYDTFSA 122
Query: 538 YGKVMEV-VIMYDQEXKKSRGFGFLSF 615
+G +++V IM D + S+GF F++F
Sbjct: 123 FGVILQVPKIMRDVDSGTSKGFAFINF 149
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCV-VMKNSESGRSRGFGFVTFA 348
D +FVG L E ++ L FS +G ++ +M++ +SG S+GF F+ FA
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFA 150
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF-EDEISVXXVTQX 651
+++GGL V+E+ L + G V+ V + D+ +GFGF+ F +E + +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 652 HFINLNGXQVEIXRA 696
+ I L G +++ +A
Sbjct: 75 NMIKLYGKPIKVNKA 89
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 47.2 bits (107), Expect = 2e-05
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Frame = +1
Query: 181 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 360
++ ++ ++VGGL + S+ L + G V+ + K+ + +GFGFV F
Sbjct: 17 VERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEED 76
Query: 361 VNLVLQ-NGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGR 537
+ ++ +L G+ P N + + G +F+G L V E L F
Sbjct: 77 ADYAIKILNMIKLYGK---PIKVNKASAHEKNMDVG-ANIFVGNLDPEVDEKLLYDTFSA 132
Query: 538 YGKVMEV-VIMYDQEXKKSRGFGFLSF 615
+G +++V IM D + S+GF F++F
Sbjct: 133 FGVILQVPKIMRDVDSGTSKGFAFINF 159
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCV-VMKNSESGRSRGFGFVTFA 348
D +FVG L E ++ L FS +G ++ +M++ +SG S+GF F+ FA
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFA 160
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF-EDEISVXXVTQX 651
+++GGL V+E+ L + G V+ V + D+ +GFGF+ F +E + +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 652 HFINLNGXQVEIXRA 696
+ I L G +++ +A
Sbjct: 85 NMIKLYGKPIKVNKA 99
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 463 GYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISV-XX 639
G V++G P TE +L FF G++ V I+ D+E + RGF F+ F +E S
Sbjct: 3 GIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRA 62
Query: 640 VTQXHFINLNGXQVEIXRA 696
V Q + NG + + A
Sbjct: 63 VEQMNGAEFNGRPLRVNLA 81
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP-SLVNLVLQN 381
++VG ++T++E L +FS G++ + ++ + E+GR RGF F+ FA+ S V Q
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 382 GPHQLDGRTI 411
+ +GR +
Sbjct: 67 NGAEFNGRPL 76
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 46.0 bits (104), Expect = 4e-05
Identities = 32/140 (22%), Positives = 61/140 (43%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
L++ GL T+ + L+ S+YG + + + + +G+GFV F P Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP-------QAA 161
Query: 385 PHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVI 564
+DG + LQ+ ++ +++ LP + TE L ++G V+ I
Sbjct: 162 AAAVDGLNTEGVQAQMAKLQQQEQDP--TNLYIANLPLDFTEQMLETELNKFGMVISTRI 219
Query: 565 MYDQEXKKSRGFGFLSFEDE 624
+ + +SRG GF + +
Sbjct: 220 LRTPD-NQSRGVGFARMDSK 238
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 46.0 bits (104), Expect = 4e-05
Identities = 32/140 (22%), Positives = 61/140 (43%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
L++ GL T+ + L+ S+YG + + + + +G+GFV F P Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP-------QAA 135
Query: 385 PHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVI 564
+DG + LQ+ ++ +++ LP + TE L ++G V+ I
Sbjct: 136 AAAVDGLNTEGVQAQMAKLQQQEQDP--TNLYIANLPLDFTEQMLETELNKFGMVISTRI 193
Query: 565 MYDQEXKKSRGFGFLSFEDE 624
+ + +SRG GF + +
Sbjct: 194 LRTPD-NQSRGVGFARMDSK 212
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
E G+LF+ L + T +++LQ F +YGEV + V+ + ++G +GF V F P
Sbjct: 277 ETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFP 330
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
++ + LPS TE LR FF +YG++ + + Y +E K RGF F+ F DE
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEG-KFRGFAFVGFLDE 53
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
++FL LP E DL+ F +YG+V EV ++ D++ +GF + F
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 172 IRDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKN-SESGRSRGFGFVTF 345
++ + E KL V L +E S + ++ F +G V + K + + RGFGFV F
Sbjct: 739 VKQKEQGECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDF 797
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
++FVGG T++ L+ +F ++ V D V M S G+S+G+GF+TF + +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKD-VKMVKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 382 GPHQLDGRT 408
P QL+ R+
Sbjct: 126 TPKQLEFRS 134
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/51 (37%), Positives = 36/51 (70%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
++F+GG P++ TET+LR F ++ V +V ++ + +S+G+GF++FE E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDG-QSKGYGFITFETE 116
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
++FVGG T++ L+ +F ++ V D V M S G+S+G+GF+TF + +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKD-VKMVKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 382 GPHQLDGRT 408
P QL+ R+
Sbjct: 127 TPKQLEFRS 135
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/51 (37%), Positives = 36/51 (70%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
++F+GG P++ TET+LR F ++ V +V ++ + +S+G+GF++FE E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDG-QSKGYGFITFETE 117
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 445 KPKRGGGYPKVFLGGLPSNVTETDLRVFF-GRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
K K G +F+G LP +TE L FF + G V V I+ D++ K +GF F++F+
Sbjct: 238 KKKEFGKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQ 297
Query: 622 EISVXXVTQXHFINLNGXQVEIXR 693
+ SV I + + I +
Sbjct: 298 DSSVSLALSMETIKMEKRDLRITK 321
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFS-RYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+FVG L +E +++ L +FS + G V ++++ ++G+ +GF FV F S V+L L
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSM 307
Query: 382 GPHQLDGRTI 411
+++ R +
Sbjct: 308 ETIKMEKRDL 317
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
L + LS++T+ +L+R F RYG++ D + ++ S +S+GFGFV F + L
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 385 PHQL-DGRTI 411
+L DGR +
Sbjct: 81 DGKLVDGREL 90
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 463 GYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
G + + L T DLR F RYG + +V I D+ ++S+GFGF+ F
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
L + LS++T+ +L+R F RYG++ D + ++ S +S+GFGFV F + L
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 385 PHQL-DGRTI 411
+L DGR +
Sbjct: 81 DGKLVDGREL 90
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 463 GYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
G + + L T DLR F RYG + +V I D+ ++S+GFGF+ F
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 369
+ K L+VGG + + +++ L F +G+V+ + + ESG+ RGFGFV F +
Sbjct: 8 NRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAM 67
Query: 370 VLQN-GPHQLDGRTI 411
+ N +L G+TI
Sbjct: 68 AIDNMNESELFGKTI 82
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFE-DEISVXXVTQX 651
+++GG +VTE L F +G V+ + I D E K RGFGF+ F+ E + +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 652 HFINLNGXQVEIXRAXP 702
+ L G + + A P
Sbjct: 73 NESELFGKTIRVNFARP 89
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.8 bits (101), Expect = 8e-05
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Frame = +1
Query: 184 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 363
++ ++ L + ++ +T +L+ +FS G V D ++ +S +GRS+G +V F D V
Sbjct: 20 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Query: 364 NLVLQNGPHQLDGRTID-PKPCNPR----------TLQKPKRGG-GYPKVFLGGLPSNVT 507
L L +L G + + C R TL G G V + L +
Sbjct: 80 PLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKID 139
Query: 508 ETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
E +R F +G++ ++ + D +++RGF ++F +
Sbjct: 140 EKMIRDIFESFGRIEKIDLEVDSN-RENRGFATITFRN 176
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 514 DLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXR 693
DL FF G V +V I+ D +S+G ++ F DE SV + L G ++I R
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.8 bits (101), Expect = 8e-05
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Frame = +1
Query: 184 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 363
++ ++ L + ++ +T +L+ +FS G V D ++ +S +GRS+G +V F D V
Sbjct: 165 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Query: 364 NLVLQNGPHQLDGRTID-PKPCNPR----------TLQKPKRGG-GYPKVFLGGLPSNVT 507
L L +L G + + C R TL G G V + L +
Sbjct: 225 PLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKID 284
Query: 508 ETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
E +R F +G++ ++ + D +++RGF ++F +
Sbjct: 285 EKMIRDIFESFGRIEKIDLEVDSN-RENRGFATITFRN 321
Score = 34.7 bits (76), Expect = 0.091
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Frame = +1
Query: 382 GPHQLDGRTIDPKPCNPRT--LQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVME 555
GP + D +P+ P+ L+ + + + + DL FF G V +
Sbjct: 139 GPERRDVMPFNPRHSPPKNAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRD 198
Query: 556 VVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXHFINLNGXQVEIXR 693
V I+ D +S+G ++ F DE SV + L G ++I R
Sbjct: 199 VRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 442 QKPKRGGGYPKVFLG--GLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
Q+ R P LG L S TE DLR FG +G++ + ++YD+ SRGFGF+ F
Sbjct: 65 QQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 178 DMDDDEKGK-LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
D ++ + K L V LS T++++L+ F +GE+ C ++ + SG SRGFGF+ F
Sbjct: 68 DRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
+++VG + + ++ L F + G++ D +M + SG SRG+ FVT+ + +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 382 GPHQLDGRTIDP-KPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEV 558
DG I KP K ++F+G +P ++ ++ + + +
Sbjct: 261 ----YDGHEISTGKPL------KVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVD 310
Query: 559 VIMY---DQEXKKSRGFGFLSFED 621
VI+Y D E K+RGF F+ F D
Sbjct: 311 VIVYSVPDNEKIKNRGFCFVDFID 334
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +1
Query: 457 GGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
G G+ ++++G +P++V E L F + GK+ ++ +M D SRG+ F+++
Sbjct: 197 GQGH-EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY 248
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
K+F+G +P N+ E DLR F ++GK+ E I+ D+ +G FL++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/57 (33%), Positives = 37/57 (64%)
Frame = +1
Query: 175 RDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
+D DD+K LF+G LS + S++ ++ F+ +GE+ + V++ ++ G S+G FV +
Sbjct: 118 KDKMDDKK--LFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKY 171
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSF 615
K+F+G +P N+ E DLR F ++GK+ E I+ D+ +G FL++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/57 (33%), Positives = 37/57 (64%)
Frame = +1
Query: 175 RDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
+D DD+K LF+G LS + S++ ++ F+ +GE+ + V++ ++ G S+G FV +
Sbjct: 118 KDKMDDKK--LFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKY 171
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +1
Query: 187 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 366
D+ ++F G L E S E L + F +Y V++ S + +S+G+GFV+F D +
Sbjct: 199 DENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSE--D 256
Query: 367 LVLQNGPHQLDGRTIDPKPCNPR 435
V ++DG+ + +P R
Sbjct: 257 YV--RAMREMDGKYVGNRPIKLR 277
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
+VF G L + V++ L F +Y + ++ + KS+G+GF+SF D
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRD 253
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +1
Query: 448 PKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEI 627
P+ G V L GLP +VT D+ F V + +++ DQ+ + G ++ FE
Sbjct: 116 PRSSGPDSIVRLRGLPFSVTSRDISDFLAPLPIVRDGILLPDQQRARPGGEAYVCFETME 175
Query: 628 SVXXVTQXHFINLNGXQVEIXRA 696
SV Q H N+ +E+ A
Sbjct: 176 SVQIAKQRHMKNIGHRYIEVFEA 198
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +1
Query: 448 PKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEI 627
P+ G V L GLP +VT D+ F V + +++ DQ+ + G ++ FE
Sbjct: 116 PRSSGPDSIVRLRGLPFSVTSRDISDFLAPLPIVRDGILLPDQQRARPGGEAYVCFETME 175
Query: 628 SVXXVTQXHFINLNGXQVEIXRA 696
SV Q H N+ +E+ A
Sbjct: 176 SVQIAKQRHMKNIGHRYIEVFEA 198
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +1
Query: 196 KGKL-FVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
+GK+ F+ LS++T +E ++ S++G++ ++ K +SG S+G FV F+ P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 172 IRDMDD-DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
++D D+ + LFV L+ T+ E+L+ FSR+G++ +C ++++ SG S + F+ F
Sbjct: 231 LKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 172 IRDMDD-DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
++D D+ + LFV L+ T+ E+L+ FSR+G++ +C ++++ SG S + F+ F
Sbjct: 231 LKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 172 IRDMDD-DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
++D D+ + LFV L+ T+ E+L+ FSR+G++ +C ++++ SG S + F+ F
Sbjct: 162 LKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
KV++GGLPS+ T +L F R+G++ +V + ++ GF F+ ++D
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDD 48
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
K++VGGL + + + L+ F R+G + V + R GF FV + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR----DAED 54
Query: 382 GPHQLDGRTIDPKPCNPRTLQKPKRGGG 465
LDG I +RGGG
Sbjct: 55 AVRALDGSRICGVRARVELSTGQRRGGG 82
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
KV++GGLPS+ T +L F R+G++ +V + ++ GF F+ ++D
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDD 48
Score = 31.9 bits (69), Expect = 0.64
Identities = 28/107 (26%), Positives = 43/107 (40%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
K++VGGL + + + L+ F R+G + V + R GF FV + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR----DAED 54
Query: 382 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 522
LDG I +RGGG GG ++ LR
Sbjct: 55 AVRALDGSRICGVRARVELSTGQRRGGGGRGGGFGGRGGGGRDSGLR 101
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
KV++GGLPS+ T +L F R+G++ +V + ++ GF F+ ++D
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDD 48
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
K++VGGL + + + L+ F R+G + V + R GF FV + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR----DAED 54
Query: 382 GPHQLDGRTIDPKPCNPRTLQKPKRGGG 465
LDG I +RGGG
Sbjct: 55 AVRALDGSRICGVRARVELSTGQRRGGG 82
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXH 654
VFLGGLP VT ++ F +G V+ V I DQ+ +G ++FE + + +
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 380
Query: 655 FINLN 669
F+ +
Sbjct: 381 FLKFD 385
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXH 654
VFLGGLP VT ++ F +G V+ V I DQ+ +G ++FE + + +
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 380
Query: 655 FINLN 669
F+ +
Sbjct: 381 FLKFD 385
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXH 654
VFLGGLP VT ++ F +G V+ V I DQ+ +G ++FE + + +
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 166
Query: 655 FINLN 669
F+ +
Sbjct: 167 FLKFD 171
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQXH 654
VFLGGLP VT ++ F +G V+ V I DQ+ +G ++FE + + +
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 380
Query: 655 FINLN 669
F+ +
Sbjct: 381 FLKFD 385
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/96 (29%), Positives = 50/96 (52%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
++++G L+ S+++++ +F YG++ D V++KN GFGFV F D ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRD-VLLKN-------GFGFVEFDD----KRDAED 51
Query: 382 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGG 489
H L+G+ + + KP+ GGG F GG
Sbjct: 52 AVHDLNGKELGGERV-ILDYSKPRGGGGDRGGFGGG 86
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/96 (29%), Positives = 50/96 (52%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
++++G L+ S+++++ +F YG++ D V++KN GFGFV F D ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRD-VLLKN-------GFGFVEFDD----KRDAED 51
Query: 382 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGG 489
H L+G+ + + KP+ GGG F GG
Sbjct: 52 AVHDLNGKELGGERV-ILDYSKPRGGGGDRGGFGGG 86
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/96 (29%), Positives = 50/96 (52%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
++++G L+ S+++++ +F YG++ D V++KN GFGFV F D ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRD-VLLKN-------GFGFVEFDD----KRDAED 51
Query: 382 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGG 489
H L+G+ + + KP+ GGG F GG
Sbjct: 52 AVHDLNGKELGGERV-ILDYSKPRGGGGDRGGFGGG 86
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
+V++G LP+ ++ D+ FF YGK+ +V++ GFGF+ F+D+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQ 45
Score = 36.7 bits (81), Expect = 0.022
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
++++G L S +++ +F YG++ D V+MKN GFGFV F D + +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSD-VIMKN-------GFGFVDFQDQRDAD----D 50
Query: 382 GPHQLDGRTIDPKPCNPRT-LQKPKRGGGY 468
H L+G+ + C R L+ P+R GY
Sbjct: 51 AVHDLNGKEL----CGERVILEFPRRKVGY 76
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 490 LPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFE 618
LP + E +LR FG+ G+V+ + I D+ +GF F++FE
Sbjct: 183 LPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFE 225
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 345
D + ++ V L E +++ L+ F + G VI + ++ +G +GF FVTF
Sbjct: 169 DRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKV 549
KVF+GGLPS V E+D+ FF RYG++
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRL 114
Score = 34.7 bits (76), Expect = 0.091
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 478 FLGGLPSNVTETDLRVFFGR-YGKVMEVVIMYDQEXKKSRGFGFLSFED-EISVXXVTQX 651
F+GG+P + +L FF + YG V+ V I D + K RG G ++F D + V +T
Sbjct: 289 FIGGVPRPLKAVELAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFSDYDAYVQAITDR 348
Query: 652 HFI 660
+ +
Sbjct: 349 YIV 351
Score = 29.9 bits (64), Expect = 2.6
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 11/155 (7%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
K+FVGGL + ++ +FSRYG + S+ + + +DPSL N + +
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRL--------QVDWPSKHYECKSDSDPSLCNEPISS 140
Query: 382 GPHQLDGRTIDPKP----CNPRTLQKPKRG-----GGYPKVFLGGLPSNVTETDLRVFFG 534
+Q P NP P + GG+ ++ G + + +V G
Sbjct: 141 SSYQPSSHLAMVSPPFGEINPFMRNMPAQSESSQTGGFGRISSGSIGGFLNPGMAQVARG 200
Query: 535 R--YGKVMEVVIMYDQEXKKSRGFGFLSFEDEISV 633
+G + + + G+ FL FE E SV
Sbjct: 201 NLGFGSTKSDGSINGDKRQHHLGYVFLLFEKERSV 235
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 448 PKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
P+ G KV++G LP +V E ++ F +YG++ V D + + F F+ FED
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFED 55
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD-PSLVNL 369
E K++VG L + ++ ++ F +YG I V +K SGR F FV F D +
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGR-IKYVDIK---SGRGPAFAFVEFEDHRDAEDA 62
Query: 370 VLQNGPHQLDGRTI 411
V ++ DGR I
Sbjct: 63 VRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 448 PKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
P+ G KV++G LP +V E ++ F +YG++ V D + + F F+ FED
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFED 55
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD-PSLVNL 369
E K++VG L + ++ ++ F +YG I V +K SGR F FV F D +
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGR-IKYVDIK---SGRGPAFAFVEFEDHRDAEDA 62
Query: 370 VLQNGPHQLDGRTI 411
V ++ DGR I
Sbjct: 63 VRARDGYEFDGRRI 76
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 475 VFLGGLPSNVTETDL-RVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
VF+GG+P DL R G YGKV V I D E K +G ++F +
Sbjct: 367 VFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISG 426
Query: 652 HFINLN 669
F+ +N
Sbjct: 427 RFVQVN 432
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVM 552
KVF+GGLP +V+E + FG +GKV+
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +1
Query: 205 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 384
++VG + + + E ++++F G V + + SG +GF +V F + + L
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMT 139
Query: 385 PHQLDGRTI--DPKPCN----PRTLQKPKRGGG 465
L GR I DPK N T + P RG G
Sbjct: 140 DSLLRGRQIKVDPKRTNKPGMSTTNRPPFRGRG 172
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 469 PKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
P+++LG +P N E D+ F YGK+ + + Y GF F+ FED
Sbjct: 2 PRLYLGKIPYNARERDVERFLKGYGKINNISMKY--------GFAFVDFED 44
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 469 PKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
P+++LG +P N E D+ F YGK+ + + Y GF F+ FED
Sbjct: 2 PRLYLGKIPYNARERDVERFLKGYGKINNISMKY--------GFAFVDFED 44
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 469 PKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
P+++LG +P N E D+ F YGK+ + + Y GF F+ FED
Sbjct: 2 PRLYLGKIPYNARERDVERFLKGYGKINNISMKY--------GFAFVDFED 44
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +1
Query: 178 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 357
+ + + ++VG + W+++ ++ +F+ G+V + K+ +G + F FV F
Sbjct: 39 EQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLE 98
Query: 358 LVNLVL 375
V L L
Sbjct: 99 SVQLAL 104
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 35.1 bits (77), Expect = 0.069
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-ADPSLVNL 369
EK K+FV + ++ + + L+ FS++G V V + G+ +G FV F + S
Sbjct: 681 EKSKVFVRNVHFQATDDELKALFSKFGTVTS-VRRVTHKDGKPKGIAFVDFDTEASAQKC 739
Query: 370 VLQNGPHQLDGRTIDPKPCNPRTLQKPKRGG 462
V L R ++ NP ++K K G
Sbjct: 740 VASGDKLMLRERELEVALSNP-PVKKDKSHG 769
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
D +L V + ++ + +L F + G V+D ++ N E G S+GFGFVT +P
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERG-SKGFGFVTMQNP 149
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
D +L V + ++ + +L F + G V+D ++ N E G S+GFGFVT +P
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERG-SKGFGFVTMQNP 149
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 366
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 345
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+GGLP+ +TE ++ +G + + D + S+G+ F + D +T
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLD----PTLTDQ 346
Query: 652 HFINLNGXQV 681
LNG Q+
Sbjct: 347 AIAGLNGMQL 356
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 369
D +L V + + +L+ F ++G V D ++ N E G S+GFGFVT P
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFN-ERG-SKGFGFVTMERPQDAER 207
Query: 370 VLQN-GPHQLDGRTIDPKPCNPRT-LQKPKRGGG 465
Q ++GR I+ R +K K GG
Sbjct: 208 ARQELHGSMIEGRKIEVNCATARVHSKKVKPTGG 241
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFL 609
K+ + + + VT++ L+ FF +YGK+ ++ +E KK+ FG L
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCIL--PREEKKTSVFGTL 156
Score = 33.1 bits (72), Expect = 0.28
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSE 309
K+ V +S + +Q LQ +FS+YG++ C++ + +
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEK 148
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 369
D +L V + + +L+ F ++G V D ++ N E G S+GFGFVT P
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFN-ERG-SKGFGFVTMERPQDAER 207
Query: 370 VLQN-GPHQLDGRTIDPKPCNPRT-LQKPKRGGG 465
Q ++GR I+ R +K K GG
Sbjct: 208 ARQELHGSMIEGRKIEVNCATARVHSKKVKPTGG 241
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 366
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 345
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+GGLP+ +TE ++ +G + + D + S+G+ F + D +T
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLD----PTLTDQ 346
Query: 652 HFINLNGXQV 681
LNG Q+
Sbjct: 347 AIAGLNGMQL 356
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 366
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 320
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+GGLP+ +TE ++ +G + + D + S+G+ F + D +T
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLD----PTLTDQ 321
Query: 652 HFINLNGXQV 681
LNG Q+
Sbjct: 322 AIAGLNGMQL 331
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 190 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 366
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 323
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+GGLP+ +TE ++ +G + + D + S+G+ F + D +T
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLD----PTLTDQ 324
Query: 652 HFINLNGXQV 681
LNG Q+
Sbjct: 325 AIAGLNGMQL 334
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 454 RGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFED 621
+G +F+ LP + ++DL F +G ++ + D+ S+ FGF+S+E+
Sbjct: 330 KGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 385
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 32.7 bits (71), Expect = 0.37
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 157 RYAV*IRDMDDDEKGK--LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGF 330
RY +RD + + L+VG LS+ T ++ + F R G+V ++ + GF
Sbjct: 21 RYQGTVRDQETALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGF 80
Query: 331 GFVTFADPSLVNLVLQN-GPHQLDGRTI 411
FV + L LQN ++D R I
Sbjct: 81 CFVEYYTREDAELALQNISNTRMDDRVI 108
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 351
+ +FVG +S + S E +++ + G V +K S +G+ +GFGF F D
Sbjct: 45 DSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGS-NGKLQGFGFCHFTD 96
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 193 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 351
+ +FVG +S + S E +++ + G V +K S +G+ +GFGF F D
Sbjct: 45 DSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGS-NGKLQGFGFCHFTD 96
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRV------FFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDE 624
K F+GGLP + TD+ F K ++ +++D++ +GF +++FE+E
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENE 63
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +1
Query: 190 DEKGKLFVGGLSWE---TSQENLQRYFSRYGEVI---DCVVMKNSESGRSRGFGFVTFAD 351
DE K F+GGL ++ T E + ++ E + D ++ + +SG +GF +VTF +
Sbjct: 3 DEIFKAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFEN 62
Query: 352 PSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGG 465
+N + +G + D K + + RGGG
Sbjct: 63 EQQMNTAI-SGLNGADFGNRVLKVNRAQQRDRSDRGGG 99
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 451 KRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFE 618
K+ G ++F+G LP+ V ET+L+ F +G + E + +GF FL +
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLD 158
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 451 KRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFE 618
K+ G ++F+G LP+ V ET+L+ F +G + E + +GF FL +
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLD 158
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 32.3 bits (70), Expect = 0.48
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSR 594
V++ +P +VTE DL FG +G + + I+Y + ++ R
Sbjct: 202 VYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERR 241
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 451 KRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFL 609
K+ G ++F+G LP+ V ET+L+ F +G + E + +GF FL
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFL 155
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVI 564
+F+G +PS+V E ++R F +GKV EV I
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVI 564
+F+G +PS+V E ++R F +GKV EV I
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 475 VFLGGLPSNVTETDLRVFFGRYGKVMEVVI 564
+F+G +PS+V E ++R F +GKV EV I
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYG 543
K+F+GG+P ++TE L+ FG +G
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 388 HQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLP-SNVTETDLRVFFGRYGKVMEVVI 564
H++D +P +K K ++F+ P +T +L++ FG YGK+ +V
Sbjct: 6 HEIDRAKCTVEPAKDENDKKLKVES--KRLFVSYFPLDRLTSKELKMNFGAYGKITDVEF 63
Query: 565 MYDQEXKKSRGFGFLSFEDEISV 633
+ D E F ++F D SV
Sbjct: 64 VSDSEGPLH--FCIITFADSRSV 84
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
KLFVG L L++ F + +V +C ++KN + FV + + ++ +
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKN--------YAFVHIEEDDVDPIITRL 55
Query: 382 GPHQLDGRTIDPKPCNPRTLQKP 450
+ +DG+ ++ K + P
Sbjct: 56 TGYTIDGKVVNIKKSTSKLRPTP 78
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+G LP NV L+ F + KV E I+ + + F+ E++ +T+
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFVHIEEDDVDPIITRL 55
Query: 652 HFINLNGXQVEIXRA 696
++G V I ++
Sbjct: 56 TGYTIDGKVVNIKKS 70
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +1
Query: 202 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 381
KLFVG L L++ F + +V +C ++KN + FV + + ++ +
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKN--------YAFVHIEEDDVDPIITRL 55
Query: 382 GPHQLDGRTIDPKPCNPRTLQKP 450
+ +DG+ ++ K + P
Sbjct: 56 TGYTIDGKVVNIKKSTSKLRPTP 78
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 472 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEXKKSRGFGFLSFEDEISVXXVTQX 651
K+F+G LP NV L+ F + KV E I+ + + F+ E++ +T+
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFVHIEEDDVDPIITRL 55
Query: 652 HFINLNGXQVEIXRA 696
++G V I ++
Sbjct: 56 TGYTIDGKVVNIKKS 70
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 259 FSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 354
F + G V+D ++ N E G S+GFGFVT +P
Sbjct: 2 FEKVGPVVDVEIIFN-ERG-SKGFGFVTMQNP 31
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 427 NPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQ-EXKKSRGFG 603
+PR + +V + L NV +T L F YG + V + D+ RG+G
Sbjct: 119 SPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYG 178
Query: 604 FLSFED 621
++ +++
Sbjct: 179 YVEYDN 184
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 362 STSCYRMDLINLMAGPSTLSRAILALFKNRNVAVDTLRCSLAG 490
+T C+ +D++ G + LF + +D +RCSL G
Sbjct: 211 NTKCHGVDILRAPDGADIYPDEAIKLFPTDSKILDRIRCSLIG 253
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 362 STSCYRMDLINLMAGPSTLSRAILALFKNRNVAVDTLRCSLAG 490
+T C+ +D++ G + LF + +D +RCSL G
Sbjct: 211 NTKCHGVDILRAPDGADIYPDEAIKLFPTDSKILDRIRCSLIG 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,879
Number of Sequences: 27780
Number of extensions: 328820
Number of successful extensions: 1045
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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