Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G05
         (915 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069097-1|AAL39242.1|  813|Drosophila melanogaster GH11602p pro...    29   8.9  
AF029776-1|AAC39102.1|  813|Drosophila melanogaster GCN5 protein.      29   8.9  
AE014296-2156|AAF49904.1|  813|Drosophila melanogaster CG4107-PA...    29   8.9  

>AY069097-1|AAL39242.1|  813|Drosophila melanogaster GH11602p
           protein.
          Length = 813

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 305 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 192
           R +  ++CP F   C+N       R H+ HL  I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155


>AF029776-1|AAC39102.1|  813|Drosophila melanogaster GCN5 protein.
          Length = 813

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 305 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 192
           R +  ++CP F   C+N       R H+ HL  I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155


>AE014296-2156|AAF49904.1|  813|Drosophila melanogaster CG4107-PA
           protein.
          Length = 813

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 305 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 192
           R +  ++CP F   C+N       R H+ HL  I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,235,406
Number of Sequences: 53049
Number of extensions: 430797
Number of successful extensions: 600
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)