Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_G04
(880 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory su... 232 1e-59
UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome... 218 1e-55
UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle, non-atp... 216 7e-55
UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome... 214 2e-54
UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome... 207 2e-52
UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n... 187 3e-46
UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1; ... 183 6e-45
UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9.... 177 4e-43
UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces cere... 177 4e-43
UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;... 159 9e-38
UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albica... 158 2e-37
UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;... 154 2e-36
UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1; Filobasid... 151 2e-35
UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2; Ent... 151 3e-35
UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subun... 135 1e-30
UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, wh... 128 2e-28
UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;... 122 1e-26
UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family prot... 122 2e-26
UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2; ... 118 2e-25
UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=... 88 3e-16
UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit, puta... 71 3e-11
UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit, puta... 49 1e-04
UniRef50_A2YDT5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q30U13 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_UPI00015BC64B Cluster: UPI00015BC64B related cluster; n... 34 4.1
UniRef50_UPI00006CCFE3 Cluster: hypothetical protein TTHERM_0018... 34 4.1
UniRef50_Q5WIN4 Cluster: ABC transporter substrate-binding prote... 34 5.5
UniRef50_A0L3J4 Cluster: Putative uncharacterized protein precur... 33 7.2
UniRef50_Q23G53 Cluster: TPR Domain containing protein; n=1; Tet... 33 7.2
UniRef50_A5DSE3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_UPI0000DB7E7C Cluster: PREDICTED: similar to GM130 CG11... 33 9.6
UniRef50_Q8F4J1 Cluster: UDP-N-acetylglucosamine:LPS N-acetylglu... 33 9.6
UniRef50_Q4LCC0 Cluster: KfrA protein; n=14; root|Rep: KfrA prot... 33 9.6
UniRef50_A2BXJ6 Cluster: Putative GDP-D-mannose dehydratase; n=1... 33 9.6
UniRef50_Q23081 Cluster: Lin-5 (Five) interacting protein protei... 33 9.6
UniRef50_A2DDP2 Cluster: Viral A-type inclusion protein, putativ... 33 9.6
>UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory
subunit 2; n=48; Euteleostomi|Rep: 26S proteasome
non-ATPase regulatory subunit 2 - Homo sapiens (Human)
Length = 908
Score = 232 bits (567), Expect = 1e-59
Identities = 113/227 (49%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 44 ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 103
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 104 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 157
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 158 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 217
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L+ L + +F + E
Sbjct: 218 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPE 264
>UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Apis mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2 - Apis
mellifera
Length = 871
Score = 218 bits (533), Expect = 1e-55
Identities = 113/226 (50%), Positives = 150/226 (66%), Gaps = 7/226 (3%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
++ EED RLQEEL L D LLG + D AL L L++TSTTSMTSVPKPLK+L++ Y
Sbjct: 11 EMDEEDTRLQEELFQLADVLLGKDEDAMLIALSQLRLLMQTSTTSMTSVPKPLKYLKKTY 70
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
+K YE I ++K + A+V+SVL+M +G L +ECL+YC+ G ++ G+WGHE
Sbjct: 71 NDMKNAYENIQNDKVRHQFAEVLSVLSM--AGAL--PGSKECLRYCIQGEVTKPGEWGHE 126
Query: 561 YVRQLEGEIAEEW-----NIEN--MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDL 719
Y+RQLEGEI +EW EN L PLV+ +I FDMKH+AEI CDL +EID+L+
Sbjct: 127 YIRQLEGEIVDEWTNSPVKEENRIRTELAPLVKGIIKFDMKHNAEIPGCDLCLEIDQLNF 186
Query: 720 LTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEY 857
L + +D +N+ RVC YL CA+Y + E Q LQ V+ YLRF EY
Sbjct: 187 LNESLDITNFERVCRYLESCAAYSEDTERRQILQVVVDHYLRFKEY 232
>UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle,
non-atpase-like protein 1; n=2; Caenorhabditis|Rep:
Proteasome regulatory particle, non-atpase-like protein
1 - Caenorhabditis elegans
Length = 981
Score = 216 bits (527), Expect = 7e-55
Identities = 102/227 (44%), Positives = 151/227 (66%), Gaps = 5/227 (2%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
+++SEED++L+E+LN+LV +L + LY P+L+ + LIR STTSMTSVPKPLKF+R H
Sbjct: 31 EEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPSLETMRTLIRASTTSMTSVPKPLKFMRPH 90
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
Y +K+++ I KK CAD+ISVLAM E+ + + Y +LG+ +GDWGH
Sbjct: 91 YNKMKEIFTSIVAPDVKKLCADIISVLAMTSD------ERTDTINYRILGSHEPIGDWGH 144
Query: 558 EYVRQLEGEIAEEWNIENMD-----SLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
EYVR L E++EEW E LL L +D+++ MKH+AE++ACDLL+EI+R+DLL
Sbjct: 145 EYVRHLAMEMSEEWKKEGTSDARKAELLKLTQDIVSHHMKHNAEVEACDLLIEIERIDLL 204
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
++ + ++ RVCLYL+ CA +P++ ++ L YL+F Y E
Sbjct: 205 ISYVQEVDHQRVCLYLLSCAPLTPDPDNIILIRTALQLYLKFNRYLE 251
>UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome
26S non-ATPase subunit 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to proteasome 26S non-ATPase subunit
2 - Nasonia vitripennis
Length = 897
Score = 214 bits (523), Expect = 2e-54
Identities = 114/231 (49%), Positives = 148/231 (64%), Gaps = 7/231 (3%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LS+EDK+LQ++L LV+ ++ N AL L L+R+STTSMT+VPKPLK+L++ Y
Sbjct: 17 ELSDEDKKLQDDLRQLVEDVVENRS--VSSALSNLRKLMRSSTTSMTAVPKPLKYLKDSY 74
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
P L + ++K TD K ADVISVLA+ S KR+CL YCL GTL+N GDWGHE
Sbjct: 75 PVLIRAHKKKTDPKEAARLADVISVLALAASAP----GKRDCLDYCLRGTLANPGDWGHE 130
Query: 561 YVRQLEGEIAEEW-------NIENMDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDL 719
YVR+LE EI EEW + LLPLV+ ++ FD KH AEIQACDL +EI RLDL
Sbjct: 131 YVRRLEMEIVEEWLGMPYEQEKTITERLLPLVKKILIFDAKHHAEIQACDLCLEIGRLDL 190
Query: 720 LTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQEQCL 872
L+ +D++NY +VC YL A Y + E L+ V YL+F EY L
Sbjct: 191 LSDCLDENNYSKVCRYLASSADYTEDLERRDLLKAVTTHYLKFHEYSRAVL 241
>UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
proteasome (prosome, macropain) 26S subunit, non-ATPase,
2 - Tribolium castaneum
Length = 870
Score = 207 bits (506), Expect = 2e-52
Identities = 106/222 (47%), Positives = 147/222 (66%), Gaps = 3/222 (1%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
D S++DK LQ EL LVD++ G+E L +L ML LIRTST+SMTSVPKPLK+L Y
Sbjct: 14 DDSDDDKELQVELKGLVDRITGDESKLVNVSLDMLKYLIRTSTSSMTSVPKPLKYLAPFY 73
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMG-VSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
AL+ + + D KK +DV+SVL+MG + G+ V +CLKYCL GT+ N+GDWGH
Sbjct: 74 GALRNKCDSMKDPLLKKNLSDVVSVLSMGAIDGS--VKRDFDCLKYCLQGTMENIGDWGH 131
Query: 558 EYVRQLEGEIAEEWNI--ENMDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQH 731
EY+RQLE EI ++W + N +L PLV+ ++ F+ H EIQ CDLLMEI+++ +L +
Sbjct: 132 EYIRQLEIEIVKQWVMCENNYKTLSPLVKQIMRFNCSHHDEIQGCDLLMEINQMYMLFDY 191
Query: 732 MDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEY 857
+ + NY +CLYL CA YV + ES + L+ + Y F E+
Sbjct: 192 VTRENYKPICLYLASCAKYVDDLESKKILKLISQFYYLFQEH 233
>UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n=1;
Dictyostelium discoideum AX4|Rep: 26S proteasome
regulatory subunit S2 - Dictyostelium discoideum AX4
Length = 893
Score = 187 bits (456), Expect = 3e-46
Identities = 93/227 (40%), Positives = 147/227 (64%), Gaps = 5/227 (2%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
+ LS ED++L+ +L +LV++ + ++ AL+ L IR+ST+SMTSVPKPLKFLR H
Sbjct: 53 ETLSPEDEKLKNDLELLVERSRDEKEEIALAALEALKTEIRSSTSSMTSVPKPLKFLRNH 112
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
Y L +Y+ + K K AD++SVLAM +G ++R+ LKY LLG+ + WGH
Sbjct: 113 YSTLVDIYKNSKEGKAKTSLADILSVLAM-ANGN----DERDTLKYKLLGSGEAIASWGH 167
Query: 558 EYVRQLEGEIAEEWNI-----ENMDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
EYV+ L EI E++I ++++ LL LV +++ F M H+AE +ACDLL+E+++L +
Sbjct: 168 EYVKHLATEIGVEYDIKKEENQSVEDLLKLVDEIVPFQMTHNAEPEACDLLLEVEQLSKI 227
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
Q++D++NY RVCLYL C+ YV P+ L+ + Y++ +Y +
Sbjct: 228 FQYIDENNYSRVCLYLFKCSYYVPGPDDINILKVCVEIYIKMKQYPD 274
>UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 946
Score = 183 bits (445), Expect = 6e-45
Identities = 99/231 (42%), Positives = 138/231 (59%), Gaps = 9/231 (3%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
D+LSE+D +L+ EL MLV++L ++ LY PAL+ L LIRTST+SMTSVPKPLKFLR H
Sbjct: 55 DELSEDDLQLKNELEMLVERLKEDDSSLYRPALESLRTLIRTSTSSMTSVPKPLKFLRPH 114
Query: 378 YPALKQVYEKITDEKT-KKFCADVISVLAMGVS--GTLEVAEKR-ECLKYCLLGTLSNVG 545
YP LK +YE + K A+++SVLAM S G E R + + G + G
Sbjct: 115 YPELKTLYESWSQASADKSLFAEILSVLAMTYSDNGQRETLHFRLKANQVASDGKSEDPG 174
Query: 546 DWGHEYVRQLEGEIAEEWNI-----ENMDSLLPLVRDVITFDMKHSAEIQACDLLMEIDR 710
WGHEY+R L E+ EE+N +N D LL L V+ F + H+AE A DLL+E++
Sbjct: 175 LWGHEYMRHLAAELGEEYNARSQDEKNTDELLELALQVVPFSLTHNAEADAVDLLLELEA 234
Query: 711 LDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+D L Q +D+ Y RVCLY++ C + +V P+ L+ Y + + E
Sbjct: 235 IDKLPQFVDKDTYARVCLYMVSCVNLLVPPDDAMFLRTAHEIYRKHDRFAE 285
>UniRef50_O49456 Cluster: Putative uncharacterized protein
F20O9.150; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F20O9.150 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1103
Score = 177 bits (430), Expect = 4e-43
Identities = 99/247 (40%), Positives = 147/247 (59%), Gaps = 27/247 (10%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
+DLSEED +L++ L + V+++ +L AL+ + IR ST+SMTSVPKPLKFLR H
Sbjct: 37 EDLSEEDLQLKQNLELYVERVQDPNPELQKIALESMRKEIRDSTSSMTSVPKPLKFLRPH 96
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLE-------VAEK------------- 497
Y LK+ + K+ + KK AD++SVLA+ +S E + E
Sbjct: 97 YGVLKEFHAKMAESDLKKMLADILSVLALTMSAEGERICVLWFLVEFDLSYLLLILCYAI 156
Query: 498 --RECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEWNIE-----NMDSLLPLVRDVITFD 656
+E L Y L G+ S++G WGHEYVR L GEIA+E+ I +++ L+ LV+ +++F
Sbjct: 157 LFQESLNYRLNGSESDIGSWGHEYVRNLAGEIAKEYTIRQGEESSIEDLMDLVQQIVSFH 216
Query: 657 MKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXT 836
MKH+AE +A DLLM+++ LDLL +H+D +N+ R C YL A Y+ P+ L
Sbjct: 217 MKHNAETEAVDLLMDVEDLDLLLEHVDNTNFRRTCNYLTSAAKYLPGPDDMLVLDIAYMI 276
Query: 837 YLRFGEY 857
Y++F EY
Sbjct: 277 YIKFAEY 283
>UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces
cerevisiae 26S proteasome regulatory subunit RPN1; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P38764
Saccharomyces cerevisiae 26S proteasome regulatory
subunit RPN1 - Yarrowia lipolytica (Candida lipolytica)
Length = 979
Score = 177 bits (430), Expect = 4e-43
Identities = 98/237 (41%), Positives = 143/237 (60%), Gaps = 22/237 (9%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
++LSEED++L+ EL MLV++L + LY P+L+ L N IRTST+SMT+VPKPLKFLR H
Sbjct: 37 EELSEEDEKLKSELEMLVERLTEKDESLYEPSLEALKNFIRTSTSSMTAVPKPLKFLRPH 96
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
YP L ++Y+ TD K K+ ADV+SVLAM SG KR+ LK+ L T ++G WGH
Sbjct: 97 YPQLAELYDTWTDAKHKQQLADVLSVLAMTYSGD----GKRDALKFRLKSTTDDLGSWGH 152
Query: 558 EYVRQLEGEIAEEWNIENMDS------------------LLPLVRD----VITFDMKHSA 671
EYVR L EI +E+ ++ +++ L VR+ ++ F +KH+A
Sbjct: 153 EYVRHLALEIGQEYQLQQVETSDDAKEGVTLDTPNSGVGSLTDVRNLGIKLVPFFLKHNA 212
Query: 672 EIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYL 842
E A DLL+EI+ ++ L + +D++ Y RVC Y++ C + P+ L YL
Sbjct: 213 EADAVDLLLEIEAVEHLPKFVDETTYARVCHYMVACVPLLAPPDDVAFLHTAYAIYL 269
>UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;
n=2; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 983
Score = 159 bits (386), Expect = 9e-38
Identities = 93/240 (38%), Positives = 133/240 (55%), Gaps = 25/240 (10%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
++LSEED++L+ +L MLV LL ++ LY L L I+ ST+SMT+VPKPLKFLR
Sbjct: 36 EELSEEDQKLKGDLEMLVQTLLEDDSKLYETTLTQLKEFIKNSTSSMTAVPKPLKFLRPF 95
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
YP L + Y+K +D+ K AD++SVLAM S T + + L++ LL SN+ WGH
Sbjct: 96 YPDLCKAYDKWSDKDQKSSLADMLSVLAMTYSDT----HQHDSLRFRLLSDTSNIASWGH 151
Query: 558 EYVRQLEGEIAEEWNIE-------------------------NMDSLLPLVRDVITFDMK 662
EYVR L EI E +N + + D +L L +++ + MK
Sbjct: 152 EYVRHLALEIGEVYNEQVEKEAEDNSTSTESSPQPPHMNFEFSKDVILQLSLEIVPYFMK 211
Query: 663 HSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYL 842
H+ E A DLL+EI+ ++ L Q +D++ Y RVC Y+I C + PE LQ YL
Sbjct: 212 HNGEEDAVDLLLEIEAIEKLPQFVDENTYKRVCQYMIACVQLLPPPEDISFLQTAYSIYL 271
>UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albicans
CaRPN1 26S proteasome regulatory subunit; n=2;
Saccharomycetaceae|Rep: Similar to CA1252|CaRPN1 Candida
albicans CaRPN1 26S proteasome regulatory subunit -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 967
Score = 158 bits (384), Expect = 2e-37
Identities = 92/229 (40%), Positives = 130/229 (56%), Gaps = 14/229 (6%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLL--GNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLR 371
++LSEED+ L++EL MLV++L +V+LY L L I+ STTSMT+VPKPLKFLR
Sbjct: 33 EELSEEDQHLKDELEMLVERLNEPSQKVELYNEYLNSLKAFIKDSTTSMTAVPKPLKFLR 92
Query: 372 EHYPALKQVYEKIT-----DEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLS 536
HYP L +Y+K D AD++SVLAM S K + LKY LL +
Sbjct: 93 PHYPLLTDLYDKWCGDYKGDSDLVIKLADILSVLAMTYSDD----GKNDSLKYRLLSSSD 148
Query: 537 NVGDWGHEYVRQLEGEIAEEWNIENMDS-------LLPLVRDVITFDMKHSAEIQACDLL 695
+ DWGHEY+R L EI + EN+ S L+ L ++ F ++H+ E A DLL
Sbjct: 149 TIVDWGHEYMRHLALEIGISYQ-ENLGSDEDLINRLIKLAMQIVPFFLEHNGEADAVDLL 207
Query: 696 MEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYL 842
+EI+ +D L Q +D++ + RVCLY++ C + P+ L YL
Sbjct: 208 LEIENIDKLPQFVDENTFTRVCLYMVSCVPLLAPPDDVSFLNTAYAIYL 256
>UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;
n=23; cellular organisms|Rep: 26S proteasome regulatory
subunit rpn1 - Schizosaccharomyces pombe (Fission yeast)
Length = 891
Score = 154 bits (374), Expect = 2e-36
Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 5/224 (2%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
+DLSEED +L+ +L +LV + +L +L L +IRTST+SMT+VPKPLKFLR H
Sbjct: 44 EDLSEEDLQLKNDLELLVQAVQDATPELVGSSLTQLKEIIRTSTSSMTAVPKPLKFLRPH 103
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
Y L ++Y+ K AD++SVL M S T K E LKY L G ++ WGH
Sbjct: 104 YFTLVKIYDSWPQSPQKTQLADILSVLGMSYSNT----SKHESLKYRLQGVTTDPSLWGH 159
Query: 558 EYVRQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
EYVR L EI EE+ D L+ L ++ F + H+AE A DLL E+ ++ +
Sbjct: 160 EYVRHLASEIEEEFASRQEEEAPTDDLMELALTIVPFFLTHNAEADAIDLLQELGAIEKV 219
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGE 854
++ N RVCLY+ C + + PE L+ Y +F +
Sbjct: 220 VPFVELDNASRVCLYITSCVNLLPFPEDVAMLRTAHAIYRKFDQ 263
>UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1;
Filobasidiella neoformans|Rep: Endopeptidase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1003
Score = 151 bits (367), Expect = 2e-35
Identities = 89/241 (36%), Positives = 134/241 (55%), Gaps = 20/241 (8%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
++SEED +L+ EL MLV +L + LY PAL+ L LIRTST+SMTSVPKPLKFLR Y
Sbjct: 45 EMSEEDLQLKAELEMLVQRLREPDSGLYQPALESLRTLIRTSTSSMTSVPKPLKFLRPFY 104
Query: 381 PALKQVYEKITDE--KTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLL-GTLSNVGDW 551
+ ++ + +++ + + A ++SVLAM S T KRE L Y +L G+ G W
Sbjct: 105 EEMGKIRDGWSEDLKEQRSLLASILSVLAMTYSDT----GKRETLYYRVLSGSEEAPGLW 160
Query: 552 GHEYVRQLEGEIAEEWNIE-----------------NMDSLLPLVRDVITFDMKHSAEIQ 680
GHEYVR L E+ EE+ D L L +++ F +KH+AE
Sbjct: 161 GHEYVRHLAAELGEEYAATYAALGEDADIPQPDTKYTTDQLRALSIELVEFFLKHNAEAD 220
Query: 681 ACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQ 860
A D+L+E++ + +T+++D + RVC Y++ C +V P+ L+ Y ++ Y
Sbjct: 221 AVDILLEVENISAITKYVDDKTFERVCRYMVSCVPLLVNPDDNAFLETASVIYSKYDRYP 280
Query: 861 E 863
E
Sbjct: 281 E 281
>UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2;
Entamoeba histolytica|Rep: 19S cap proteasome S2 subunit
- Entamoeba histolytica
Length = 843
Score = 151 bits (365), Expect = 3e-35
Identities = 77/218 (35%), Positives = 133/218 (61%), Gaps = 1/218 (0%)
Frame = +3
Query: 213 EDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIR-TSTTSMTSVPKPLKFLREHYPAL 389
ED +L+EE+ +LV ++ +++ A+++L +R +T+S T++PK KF+R + L
Sbjct: 14 EDDQLKEEIELLVKRIQDPNIEISTSAIELLRKTLRGDNTSSSTTLPKTTKFIRPYLDQL 73
Query: 390 KQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVR 569
KQ + ++T+ + ++ ADV+SVL M +G EK E LKY LLG L ++G WGHEY R
Sbjct: 74 KQFHSQLTNGELRQSLADVLSVLVM-TNG-----EKGESLKYKLLGHLDDLGQWGHEYTR 127
Query: 570 QLEGEIAEEWNIENMDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNY 749
L GE+ + W + D L+P+ + +I F ++H+AE A D +E + L +L Q+ +++ +
Sbjct: 128 NLTGEVVDVWQ-QQKDLLIPIAQKLIEFHIEHNAEQDAVDFCIETNNLAMLEQYSEKARF 186
Query: 750 PRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
++ LY CA+Y EP+ Q Q +L L+ +Y +
Sbjct: 187 DKLLLYASSCAAYYPEPQDKQIYQFLLHIALKQHKYSD 224
>UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subunit
1; n=9; Trypanosomatidae|Rep: Proteasome regulatory
non-ATP-ase subunit 1 - Trypanosoma brucei
Length = 911
Score = 135 bits (327), Expect = 1e-30
Identities = 77/227 (33%), Positives = 134/227 (59%), Gaps = 7/227 (3%)
Frame = +3
Query: 204 LSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTT-SMTSVPKPLKFLREHY 380
+SEED+R++ ++ +LV ++ + +L A+ L +L+RT T+ S+ SVPKPLK++R Y
Sbjct: 34 MSEEDERIKGQVELLVTRVGDSNTELAAVAVDQLIDLLRTHTSGSVASVPKPLKYVRSMY 93
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAE-KRECLKYCLLGTLSNVGDWGH 557
L++V ++ T+ K DV+S +AM T+E + +R L++ LLGT ++ WGH
Sbjct: 94 GQLERVQKETTNPKLAVRLHDVLSFVAM----TIEFPDGQRPALEHKLLGTQDDLAHWGH 149
Query: 558 EYVRQLEGEIAEEWN--IENMDSLLPL---VRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
EY+R L G I+ EW + +S++ L V+ ++++ +KH E A DLLME++ + +
Sbjct: 150 EYLRFLAGCISTEWKERVSKGESVVHLDGFVQQIVSYMVKHQDEPTAVDLLMEVENIKAI 209
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+D N+ R+ YL + Y+ P T+ L+ V Y++ Y E
Sbjct: 210 IPFIDGHNHRRIASYLAAASKYLTRPMDTEALRVVYDIYVKMESYTE 256
>UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_88, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 128 bits (309), Expect = 2e-28
Identities = 73/209 (34%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Frame = +3
Query: 207 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 386
SE+D L+ L +++ N + +L+ L +R++TTSMTSVPKP KFL+E Y
Sbjct: 34 SEQDLELKNRLEQYAQEIIQNNTE----SLEKLKTEVRSATTSMTSVPKPFKFLKESYGK 89
Query: 387 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 566
L + Y ++ + KK AD +SVLAM G R+ L Y GTL WGHEY+
Sbjct: 90 LVEFYNELEASRFKKQLADFLSVLAMTYGG------DRDSLLYLQEGTLEEFKFWGHEYL 143
Query: 567 RQLEGEIAEEWNI-----ENMDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQH 731
L I E+ I + D LL LV +++ + M H++E A DLL E+D+L + Q+
Sbjct: 144 SHLAANIGSEFQIRLQKVDGADDLLFLVDEIVPYFMDHNSEHDAIDLLSEVDQLQKIEQY 203
Query: 732 MDQSNYPRVCLYLIGCASYVVEPESTQXL 818
++Q+N R+ +YL+ + + + L
Sbjct: 204 VNQANIQRILVYLLSLVPFCSDQDELDVL 232
>UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;
n=8; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 993
Score = 122 bits (294), Expect = 1e-26
Identities = 85/246 (34%), Positives = 124/246 (50%), Gaps = 27/246 (10%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
+ LSEED +L+ +L +LV++L ++ LY +L L I+ ST+SMT+VPKPLKFLR
Sbjct: 36 EQLSEEDAKLKTDLELLVERLKEDDSSLYEASLNALKESIKNSTSSMTAVPKPLKFLRPT 95
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
YP L +Y+K TD K ADV+S+LAM T K + L+Y LL +S+ WGH
Sbjct: 96 YPDLCSIYDKWTDPNLKSSLADVLSILAM----TYSENGKHDSLRYRLLSDVSDFEGWGH 151
Query: 558 EYVRQLEGEIAEEWNIE-NMDSLLPLVRD---------VITFDMKHSAEIQAC-DLLM-- 698
EY+R L EI E +N + D+ D F+ ++ C D++
Sbjct: 152 EYIRHLALEIGEVYNDQVEKDAEDETSSDGSKSDGSAATSGFEFSKEDTLRLCLDIVPYF 211
Query: 699 -----EIDRLDLL---------TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXT 836
E D +DLL Q +D++ + RVC Y++ C + PE L+
Sbjct: 212 LKHNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQYMVACVPLLPPPEDVAFLKTAYSI 271
Query: 837 YLRFGE 854
YL E
Sbjct: 272 YLSQNE 277
>UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family
protein; n=2; Trichomonas vaginalis G3|Rep:
Proteasome/cyclosome repeat family protein - Trichomonas
vaginalis G3
Length = 850
Score = 122 bits (293), Expect = 2e-26
Identities = 73/220 (33%), Positives = 122/220 (55%), Gaps = 4/220 (1%)
Frame = +3
Query: 216 DKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQ 395
D+ L E L V+K ++ A+ +L ++ ST+SMTSVPKP+K L + L +
Sbjct: 11 DEILIETLRTNVEKACNGDLQTRLAAVAVLVEELKKSTSSMTSVPKPMKHLLPYLEELTR 70
Query: 396 VYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQL 575
Y T+E+ +K AD++S+L++ + V K + L Y L + N+G WGHEYVR L
Sbjct: 71 AYNTYTNEEFRKKIADLLSLLSI-----INVDTKYDVLLYRLECPVENIGFWGHEYVRCL 125
Query: 576 E-GEIAEEWNIENMDS---LLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQS 743
I N++++ S + PLV + + M H+ E ACDLL+E++RL+ + +D+
Sbjct: 126 TLNLIKASKNLQDLPSGIDINPLVDQISKYYMTHNDEPDACDLLLELNRLEDIVPLVDEE 185
Query: 744 NYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
++ RVC YL+ Y EP +T L+ ++ Y + + +
Sbjct: 186 SHNRVCTYLLQLYDYKPEPINTNILRVLVTIYKKLNKVNQ 225
>UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2;
Cryptosporidium|Rep: Proteasome regulatory subunit S2 -
Cryptosporidium parvum Iowa II
Length = 1045
Score = 118 bits (284), Expect = 2e-25
Identities = 80/223 (35%), Positives = 126/223 (56%), Gaps = 22/223 (9%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLG--NEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLRE 374
DL+EEDK L+EE++ LV+K++ +E ++ +L+ LS+LI+TST+ MTSVPK LKFL
Sbjct: 40 DLTEEDKVLKEEIDELVEKVVSGKSEFEVSKSSLESLSSLIKTSTSGMTSVPKALKFLGI 99
Query: 375 HYPALKQVYEKITDEK--TKKFCADVISVLAMGVSGTLEVAEKRECLKYCLL-GTLSNVG 545
HY LK+ + K + ++ISVL S TL +++ LKY LL G +
Sbjct: 100 HYETLKEFCDSQVSNKGQLSELSCEIISVL----STTLGDMKEKRALKYRLLSGNKKGIL 155
Query: 546 DWGHEYVRQLEGEIAEEWNIE--NMD------------SLLPLVRDVITFDMKHSAEIQA 683
DWG EYVR + GEI E++ N D LL LV+ ++ + ++ E++A
Sbjct: 156 DWGQEYVRNIVGEITLEYSERQTNQDLSGVSDQEADVSDLLELVKIMVPYQIEKHCELEA 215
Query: 684 CDLLMEIDRLDLLTQHM---DQSNYPRVCLYLIGCASYVVEPE 803
DLL E+++++ L +++ D R+ LYL + Y + E
Sbjct: 216 IDLLCEVEQMETLLEYLAKIDIEQMERIVLYLQQLSQYAISAE 258
>UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 4 - Encephalitozoon cuniculi
Length = 795
Score = 87.8 bits (208), Expect = 3e-16
Identities = 61/212 (28%), Positives = 112/212 (52%), Gaps = 4/212 (1%)
Frame = +3
Query: 234 ELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKIT 413
EL ++V+++ ++D+ AL ML ++ ++S + ++L ++ L+ V +++
Sbjct: 5 ELKIIVERIQDPDIDIQNNALNMLFDVTKSSHSKSIDTIN-FQYLADNLDVLEDVCKRLE 63
Query: 414 DEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAE 593
K + C D+IS + + V ++R+ L Y + G + ++ +WGH YV++L G IA+
Sbjct: 64 GNKKRWLC-DIISAICV-------VDDERKLLAYRVEGNIIDLKEWGHLYVKKLIGCIAD 115
Query: 594 EWNIENMDSLLPLVRDV----ITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVC 761
N MD RDV I F KH+AE +A D L+E+ ++ + ++D NY R+
Sbjct: 116 VKN-NKMDFPFAKTRDVGRECIDFLFKHNAEFEAIDFLVEVGGIETVLDYVDTHNYNRIV 174
Query: 762 LYLIGCASYVVEPESTQXLQGVLXTYLRFGEY 857
LYL S+V E +L YL+ G++
Sbjct: 175 LYLEDMNSFVDLEEV------ILKIYLKMGDH 200
>UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit,
putative; n=5; Plasmodium|Rep: 26S proteasome regulatory
subunit, putative - Plasmodium vivax
Length = 1039
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/142 (26%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
++L+EE+K+ +EEL +L+ +L + ++ ++ ML+ I ++ +TS LK L+ H
Sbjct: 35 EELNEEEKKKKEELELLITRLRDEDPEVVNLSITMLNKEIIDTSGILTSSLLALKVLKTH 94
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
Y L +++E++ E+ K+ +++IS L + + ++ +KY ++G +++ ++GH
Sbjct: 95 YSTLLEIHEEMKFEECKRKMSNMISAL------STTIGDENNIVKYVIMGNKNDLVNYGH 148
Query: 558 EYVRQLEGEIAEEW-NIENMDS 620
EY++ L ++ E+ N++ +S
Sbjct: 149 EYIKNLISKLLVEFKNVKEEES 170
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/87 (25%), Positives = 44/87 (50%)
Frame = +3
Query: 612 MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYV 791
+ + LV ++ + H+ E +A DLL+E+D+++ + ++D+ + R LYL+ Y
Sbjct: 244 LSHIYELVNIIVPYCFNHNTEYEAIDLLIEVDKINDIHLYVDEKSCERSILYLLNITHYS 303
Query: 792 VEPESTQXLQGVLXTYLRFGEYQEQCL 872
E L V+ L+ + +CL
Sbjct: 304 SSTEEYYKLMEVILHILKKHKRHVECL 330
>UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit,
putative; n=1; Babesia bovis|Rep: Proteasome 26S
regulatory subunit, putative - Babesia bovis
Length = 1008
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEV--DLYFPALQMLSNLIRTSTTSMTSVPKPLKFLR 371
D L+ D +EEL++LV +LL +E+ D+ P L LS S+TSVPK L+FL
Sbjct: 7 DSLNPADAAYKEELDLLVKELLASELNDDIARPLLLQLSIHATKENDSITSVPKSLQFLI 66
Query: 372 EHYPALKQVYEK 407
+H Q+Y++
Sbjct: 67 QHRDNFHQIYDE 78
Score = 28.3 bits (60), Expect(2) = 0.71
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 540 VGDWGHEYVRQLEGEIAEEWNIEN 611
+ DWG+EY+ L +I +N+E+
Sbjct: 158 INDWGNEYLTSLSTQIVSYFNLES 181
Score = 27.5 bits (58), Expect(2) = 0.71
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 624 LPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQH--MDQSNYPRVCLYLIGCASYVVE 797
L + + +H E +A D+L+E+D ++ + D RV YL+ ++Y
Sbjct: 220 LKFTEAITDYYFQHGFEFEAIDILLEVDLIESIRGKCGTDYDLITRVSNYLLSISAYAAT 279
Query: 798 PESTQXL 818
T+ +
Sbjct: 280 YYETRRI 286
>UniRef50_A2YDT5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 91
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 336 MTSVPKPLKFLREHYPALKQVYEKITDEK-TKKFCADVISVLAMGVSGTLEVAEKRECLK 512
MTSVPKPLK L+ HY LK +E + + +K F SVLA S EK E ++
Sbjct: 1 MTSVPKPLKLLQPHYGTLKSYHETMPESSDSKVFLLLGKSVLAFQFSNVSNTPEKHEYVQ 60
Query: 513 -YCLLG 527
+ LLG
Sbjct: 61 VFVLLG 66
>UniRef50_Q30U13 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Putative
uncharacterized protein - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 626
Score = 35.9 bits (79), Expect = 1.4
Identities = 30/118 (25%), Positives = 51/118 (43%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
D E+ K+L+ +LN ++ + L S L + TSM S+ LK +E+
Sbjct: 262 DFEEQSKKLELKLNEIMQQNLD-------------SKLKKFDETSMKSLDGLLKPFKENL 308
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWG 554
K+ E + TKKF A++ + + ++++ E L L G G WG
Sbjct: 309 DTFKKKVEDSQENSTKKF-AELSKEIEQVTKAGMNISKEAESLTKALKGKKQMQGSWG 365
>UniRef50_UPI00015BC64B Cluster: UPI00015BC64B related cluster; n=1;
unknown|Rep: UPI00015BC64B UniRef100 entry - unknown
Length = 196
Score = 34.3 bits (75), Expect = 4.1
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNM----LVDKL--LGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPL 359
+++ + ++ +QEE + L++KL L E ++ L L+R S + S+ + L
Sbjct: 3 EEIKQGNENIQEEQELTKEQLIEKLSYLEKEYEVQKERCSKLEALVRASNEKLISLNREL 62
Query: 360 KFLREHYPALKQVYEKITDEKTKKFCADVI 449
+ L+EHY ++ +K E K DVI
Sbjct: 63 EQLKEHYRKEREQLKKYAYEGIVKDMLDVI 92
>UniRef50_UPI00006CCFE3 Cluster: hypothetical protein
TTHERM_00188940; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00188940 - Tetrahymena
thermophila SB210
Length = 950
Score = 34.3 bits (75), Expect = 4.1
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTS-----TTSMTSVPKPLKF 365
D S +DKR Q++ + L +++ LY ALQ L+ S T+S T +PKP
Sbjct: 355 DQSIQDKRTQQQSQ--IQSQLQSQI-LYEQALQQKLKLLPQSKENKNTSSFTQIPKPFNK 411
Query: 366 LREHYPALKQVYEK 407
+EH PA QV K
Sbjct: 412 FQEH-PAYNQVQLK 424
>UniRef50_Q5WIN4 Cluster: ABC transporter substrate-binding protein;
n=1; Bacillus clausii KSM-K16|Rep: ABC transporter
substrate-binding protein - Bacillus clausii (strain
KSM-K16)
Length = 328
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +3
Query: 237 LNMLVDKLLGNEVDLYF----PALQMLSNLIRTSTTSMTSVPKPL 359
L + DKL+GNEVDL F PA Q++++ I TSV P+
Sbjct: 80 LQTIADKLIGNEVDLVFANATPAAQIMASSITEVPILFTSVTDPV 124
>UniRef50_A0L3J4 Cluster: Putative uncharacterized protein
precursor; n=1; Magnetococcus sp. MC-1|Rep: Putative
uncharacterized protein precursor - Magnetococcus sp.
(strain MC-1)
Length = 201
Score = 33.5 bits (73), Expect = 7.2
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Frame = +3
Query: 237 LNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY---PALKQVYEK 407
L M +LL EV A +L +R + ++ + KP++ +E Y + Y +
Sbjct: 68 LEMRYTELL-KEVTTKRAAFTLLEEELRAADLTLKDMEKPMREAKEQYRKAQLMSLEYPE 126
Query: 408 ITDEKTKKFCADVISVLAMGVSGTLE---VAEKRECLKYCLLGTLSNVGDWGHEYVRQLE 578
++ EK +K DV +++ G L+ V + R L Y L + + QL
Sbjct: 127 VSTEKERKAYYDVQKLVSQQTKGQLQGLAVLKNRLTLAYESLESAEQALERTRHEAEQLR 186
Query: 579 GEIAE 593
++AE
Sbjct: 187 SQLAE 191
>UniRef50_Q23G53 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 959
Score = 33.5 bits (73), Expect = 7.2
Identities = 27/96 (28%), Positives = 40/96 (41%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
+D S E+K LQE+ M +LL DL Q++ K + L EH
Sbjct: 863 EDPSWEEKELQEDFEMKKIQLLNKIADLRMKTCQVI------QIAGWQVEKKQCELLFEH 916
Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLE 485
L + Y+KI +E+ K I + + TLE
Sbjct: 917 TQLLVEAYKKINNEEKNKELDMFIKSIKNTIEQTLE 952
>UniRef50_A5DSE3 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 938
Score = 33.5 bits (73), Expect = 7.2
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1
Query: 682 AWISAECFMSNVITSRTSGKSESMFSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKH 503
A SA S+ +S +S S S S F +S S S+C + + PT PR+ Y H
Sbjct: 669 AHTSASSSSSSFSSSSSSSSSSSSSSSFFTS--SSSSCSSSTFSGFPTISTKPRKPYHFH 726
Query: 502 SLF 494
+LF
Sbjct: 727 ALF 729
>UniRef50_UPI0000DB7E7C Cluster: PREDICTED: similar to GM130
CG11061-PB, isoform B, partial; n=1; Apis mellifera|Rep:
PREDICTED: similar to GM130 CG11061-PB, isoform B,
partial - Apis mellifera
Length = 620
Score = 33.1 bits (72), Expect = 9.6
Identities = 41/171 (23%), Positives = 72/171 (42%)
Frame = +3
Query: 225 LQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYE 404
++ EL L KL E + L+ ++ + + S VP+P+K L + + +
Sbjct: 441 IENELEQLKAKL--KEKEAILQDLEENTH-VESPNKSSVIVPEPIKQLEQRFKETMEQVA 497
Query: 405 KITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGE 584
++T+EK K + L + + E + L L N + RQL +
Sbjct: 498 ELTEEKQK------LEHLVLQLQSETETIGEYITLYQKQRAVLQNRAIEREKIFRQLLEQ 551
Query: 585 IAEEWNIENMDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQHMD 737
++ E + L LVRD + + HS D L+E + LD+LT+ D
Sbjct: 552 RNQQQ--EQLHKLKVLVRDFLRKEYIHS---NGTDRLIETELLDVLTEIKD 597
>UniRef50_Q8F4J1 Cluster: UDP-N-acetylglucosamine:LPS
N-acetylglucosamine transferase; n=4; Leptospira|Rep:
UDP-N-acetylglucosamine:LPS N-acetylglucosamine
transferase - Leptospira interrogans
Length = 358
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 285 NINRLHCPKAYRLAYSIPPVGVCLPRKDHHL-EPLRAQLFPSLALQFY 145
N+NRL A ++A+S+PP +P L PLR + P ++L+F+
Sbjct: 129 NVNRLFFRFASKVAFSLPPKNSKIPCDYQVLGNPLRKKTIPKMSLKFF 176
>UniRef50_Q4LCC0 Cluster: KfrA protein; n=14; root|Rep: KfrA protein
- IncP-1beta multiresistance plasmid pB8
Length = 343
Score = 33.1 bits (72), Expect = 9.6
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Frame = +3
Query: 246 LVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPAL-KQVYEKITDEK 422
+ DKL DL+ AL+M +N + ++ +V + + R+ L Q+ ++ + K
Sbjct: 65 ITDKLAELGGDLWAVALEMANNRLAAEREALEAVRQETEAARQEAAELADQLTGELDEAK 124
Query: 423 TKKFCADVISVLAMG----VSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQ--LEGE 584
+ + + A G + G L +R G L D H+ RQ E +
Sbjct: 125 ARVAALEAVEAAAKGEADELRGKLAATSERAATAEARAGELRTELDHAHQEARQARAERD 184
Query: 585 IAEEWNIENMDSLLPLVRDVITFDMKHSAEIQ--ACDLLMEIDRLDLLT 725
A+E + D + L D+ + + +AEI+ A +L +++R + T
Sbjct: 185 KAQERATASADQVEALRADLAAANSR-TAEIERRAGELRADLERANQAT 232
>UniRef50_A2BXJ6 Cluster: Putative GDP-D-mannose dehydratase; n=1;
Prochlorococcus marinus str. MIT 9515|Rep: Putative
GDP-D-mannose dehydratase - Prochlorococcus marinus
(strain MIT 9515)
Length = 322
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 453 VLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEY 563
V A V G L++ K+E K+ LG L + DWGH Y
Sbjct: 191 VTAKVVKGALDIKYKKE--KFLELGNLDSYRDWGHSY 225
>UniRef50_Q23081 Cluster: Lin-5 (Five) interacting protein protein
1, isoform a; n=5; Caenorhabditis|Rep: Lin-5 (Five)
interacting protein protein 1, isoform a -
Caenorhabditis elegans
Length = 2396
Score = 33.1 bits (72), Expect = 9.6
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNMLVDKL--LGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLR 371
++L E+ RL+ E+N L DK L NE + ++ IR S ++ K L LR
Sbjct: 745 ENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLR 804
Query: 372 EHYPALKQVYEKITDE 419
E Y + EKI E
Sbjct: 805 EKYDRVHTDNEKILGE 820
>UniRef50_A2DDP2 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 2120
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNML---VDKLLGNEVDLYFPALQMLSN 311
+ L +E+++LQEE+N L ++KL N+ LY P+ + L N
Sbjct: 1148 NSLKQENEKLQEEINQLQNTIEKLQNNKSKLYSPSPKKLQN 1188
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = +3
Query: 198 DDLSEEDKRLQEELNML---VDKLLGNEVDLYFPALQMLSN 311
+ L +E+++LQEE+N L ++KL N+ LY P+ + L N
Sbjct: 1543 NSLKQENEKLQEEINQLQNTIEKLQNNKSKLYSPSPKKLQN 1583
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,534,536
Number of Sequences: 1657284
Number of extensions: 13344925
Number of successful extensions: 36632
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 35313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36563
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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