Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G04
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    27   0.19 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   7.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   7.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   7.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 21/76 (27%), Positives = 39/76 (51%)
 Frame = +3

Query: 288 PALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMG 467
           PALQ  ++LI     ++      L  L E +  +K  Y K+TD K K+F   +  +L++G
Sbjct: 50  PALQYCTHLIY-GYAAIDEETYKLTPLNEQFDVIKDNYRKVTDLK-KRF-PKLKVLLSVG 106

Query: 468 VSGTLEVAEKRECLKY 515
            +  +   ++ + +KY
Sbjct: 107 GNADVSGQDEEKNIKY 122


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 553 PQSPTFDNVPRRQYFKHSLFSATSRVPLTPI 461
           P  P   N+    Y  HS++ +++ +PL  I
Sbjct: 334 PNLPLTHNIAHNPYPSHSIYPSSNLMPLNNI 364


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 624 LPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQHM 734
           + L  DV+ F +K       C+ L E  R + +T+H+
Sbjct: 221 IALNNDVLLFFVKVFRPEPLCERLFEASREEYVTRHL 257


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +3

Query: 414 DEKT--KKFCADVISVLAMGVSGTLEVAEKRECLK 512
           D KT  KK+  D+IS  A G++      +  E LK
Sbjct: 165 DVKTAMKKYSVDIISTCAFGINTYCFRNDNSEILK 199


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 201 HHLEPLRAQLFP 166
           HHLEP R Q+ P
Sbjct: 13  HHLEPHRMQIKP 24


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 201 HHLEPLRAQLFP 166
           HHLEP R Q+ P
Sbjct: 13  HHLEPHRMQIKP 24


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 366 LREHYPALKQVYEKI 410
           L EH   L+QV+EK+
Sbjct: 468 LNEHLEHLRQVFEKL 482


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,948
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)