Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G04
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1276 - 28907726-28907842,28908012-28908062,28908146-289082...   200   2e-51
02_01_0356 + 2563773-2563898,2564031-2564131,2564375-2564498,256...   191   7e-49
09_02_0460 + 9567656-9567766,9567849-9567949,9568527-9568647,956...   117   1e-26
07_01_0071 - 522920-523063,524125-524212,524289-524677                 31   0.92 
11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483...    30   2.1  
07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146     30   2.1  
06_03_1248 + 28685911-28687719                                         29   3.7  
03_06_0010 + 30990002-30990273,30990372-30990488,30990581-309906...    29   6.5  
08_01_0680 - 5958066-5960253,5960707-5961503                           28   8.6  
02_05_0562 - 29970207-29970224,29970290-29970364,29971083-299714...    28   8.6  
02_02_0592 - 11934238-11934249,11934755-11934835,11935166-119353...    28   8.6  

>06_03_1276 -
           28907726-28907842,28908012-28908062,28908146-28908254,
           28908345-28908430,28908537-28908650,28908731-28908790,
           28909088-28909303,28909401-28909514,28910632-28910853,
           28910946-28911050,28911136-28911276,28911368-28911472,
           28911538-28911645,28911753-28911911,28912060-28912140,
           28912219-28912330,28912433-28912515,28912631-28912669,
           28913061-28913126,28913601-28913643,28913969-28914036,
           28914264-28914323,28914409-28914529,28915167-28915267,
           28915354-28915494
          Length = 873

 Score =  200 bits (487), Expect = 2e-51
 Identities = 98/225 (43%), Positives = 145/225 (64%), Gaps = 5/225 (2%)
 Frame = +3

Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
           DDLSEED+ L+E+L + V +    +  +   AL+ +   IR++T+SMTSVPKPLKFLR H
Sbjct: 45  DDLSEEDQALKEQLELYVVRAQDTDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPH 104

Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
           Y  LK  +E + +   KK+ AD++SVLA+    T+    +RE L Y ++G+  ++G WGH
Sbjct: 105 YGTLKAYFETMPESDLKKYMADILSVLAL----TMSAEGERESLNYRMIGSEGDIGSWGH 160

Query: 558 EYVRQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
           EYVR L GEIA+E+          DSL  LV  +++F MKH+AE +A DLLME+++LDLL
Sbjct: 161 EYVRNLAGEIAQEFQKRQDDGMPTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKLDLL 220

Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEY 857
            +H+D +NY R CLYL   + Y+  P+    L+     Y++FG++
Sbjct: 221 VKHVDSTNYKRTCLYLTSSSKYLPAPDDMSALKIAFEIYMKFGDF 265


>02_01_0356 +
           2563773-2563898,2564031-2564131,2564375-2564498,
           2564592-2564651,2564762-2564829,2565520-2565562,
           2566026-2566091,2566237-2566275,2566375-2566457,
           2566654-2566765,2566840-2566923,2567026-2567184,
           2567268-2567372,2567451-2567555,2567661-2567801,
           2567920-2568024,2568111-2568335,2568762-2568875,
           2568963-2569178,2569674-2569733,2569827-2569940,
           2570047-2570132,2570211-2570319,2570408-2570586,
           2570673-2570741,2570792-2571005
          Length = 968

 Score =  191 bits (465), Expect = 7e-49
 Identities = 98/223 (43%), Positives = 143/223 (64%), Gaps = 6/223 (2%)
 Frame = +3

Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
           DDLSEED  L+E+L + V +    +  +   AL+ +   IR++T+SMTSVPKPLKFLR H
Sbjct: 40  DDLSEEDLALKEQLELYVVRAQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPH 99

Query: 378 YPALKQVYEKITDEKT-KKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWG 554
           Y  LK  +E + +    K++ AD++SVLA+    T+    +RE LKY LLG+  ++G WG
Sbjct: 100 YGTLKSYFETMPESSDLKRYMADILSVLAL----TMSAEGERESLKYRLLGSEGDIGSWG 155

Query: 555 HEYVRQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDL 719
           HEYVR L GEIA+E+         +D+L+ LV+ +++F MKH+AE +A DLLME++ LDL
Sbjct: 156 HEYVRNLAGEIAQEFQKRQDDDMPIDALMELVQQIVSFHMKHNAEPEAVDLLMEVEDLDL 215

Query: 720 LTQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRF 848
           L +H+D +NY R CLYL   + Y+  P+    L      Y++F
Sbjct: 216 LVEHVDSTNYKRTCLYLTSSSKYLPAPDDMLALDIAYTIYMKF 258


>09_02_0460 +
           9567656-9567766,9567849-9567949,9568527-9568647,
           9568733-9568792,9569022-9569089,9569469-9569535,
           9569586-9569666,9570152-9570217,9570372-9570410,
           9570527-9570609,9570712-9570823,9570902-9570982,
           9571132-9571290,9571397-9571504,9571570-9571674,
           9571765-9571905,9572007-9572147,9572205-9572426,
           9573617-9573730,9573830-9574045,9574373-9574432,
           9574513-9574626,9574735-9574820,9574904-9575012,
           9575099-9575277,9575357-9575429
          Length = 938

 Score =  117 bits (281), Expect = 1e-26
 Identities = 61/136 (44%), Positives = 91/136 (66%)
 Frame = +3

Query: 198 DDLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 377
           DDLSEED+ L+E+L + V +    +  +   AL+ +   IR++T+SMTSVPKPLKFLR H
Sbjct: 35  DDLSEEDQALKEQLELYVVRAQDPDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPH 94

Query: 378 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 557
           Y  LK  +E + + + KK+ AD++SVLA+    T+    +RE LKY ++G+  ++G WGH
Sbjct: 95  YGILKAYFETMPESELKKYMADILSVLAL----TMSAEGERESLKYRMIGSEGDIGSWGH 150

Query: 558 EYVRQLEGEIAEEWNI 605
           EYVR L  EI  E+++
Sbjct: 151 EYVR-LYLEITLEFSV 165



 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
 Frame = +3

Query: 567 RQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQH 731
           R L GEIA+E+          DSL  LV  +++F MKH+AE +A DLLME+++LDLL +H
Sbjct: 189 RNLAGEIAQEFQKRQDDGMTTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKLDLLVKH 248

Query: 732 MDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEY 857
           +D +NY R CLYL   + Y+  P+    L+     Y++FG++
Sbjct: 249 VDSTNYKRTCLYLTSSSKYLPAPDDMSALKIAFEIYMKFGDF 290


>07_01_0071 - 522920-523063,524125-524212,524289-524677
          Length = 206

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 462 MGVSGTLEVAEKRECLKYCLLGTLSNVGDWG-HEYVRQLEGEIAEE 596
           M V   L+V   +   KYCLLG LS    W  H+ +R+LE +  E+
Sbjct: 123 MVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEK 168


>11_04_0450 -
           17847676-17847841,17848024-17848131,17848223-17848377,
           17848471-17848560,17848650-17848748,17848862-17848928,
           17849028-17849124,17849357-17849492,17849579-17849634,
           17849718-17849801,17849909-17850125
          Length = 424

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
 Frame = +3

Query: 231 EELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKI 410
           E+  + V + L  E+  YF       +   TS +    +   LK+      A+   Y  +
Sbjct: 232 EKATLSVKRRLACELVSYFSQAHYCLSGCDTSDSFGKKLLLFLKWKCMEAKAVAYYYHGL 291

Query: 411 TDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNV-GDWG 554
             +K  +  + + +V  +  +  L    KR CL +CL   ++ V   WG
Sbjct: 292 VLDKGNEASSHISAVCCLSAADDLVADSKRACLSFCLANPITRVPPPWG 340


>07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146
          Length = 171

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -1

Query: 589 AISPSNCLTYSCPQSPTFDNVPRRQYFKHSLFSATSRVPLTPIAKTEITSAQNFFVFSSV 410
           A+     L    PQ P F  VP R     ++   TS  PL P++  E     NF      
Sbjct: 46  AVGGGGVLPPQAPQPPRF-GVPPRFQVSEAMEEQTSSEPLDPLSHEEFLHMSNFVSSLYA 104

Query: 409 IFSYT 395
           + S+T
Sbjct: 105 VNSFT 109


>06_03_1248 + 28685911-28687719
          Length = 602

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 607 SIFHSSAISPSNC-LTYSCPQSPTFDNVPRRQYFKHSLFSATSRVPLTP 464
           S+  SS+ SPS+  L  S P S      PRR   K    SA S  P+TP
Sbjct: 58  SLHSSSSSSPSSSSLLSSSPSSKGTGTTPRRSADKAPSASAASSRPITP 106


>03_06_0010 +
           30990002-30990273,30990372-30990488,30990581-30990668,
           30991505-30991648
          Length = 206

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 462 MGVSGTLEVAEKRECLKYCLLGTLSNVGDWG-HEYVRQLEGEIAEE 596
           M +   L+V   +   KYCLLG LS    W  ++ +R+LE +  E+
Sbjct: 123 MVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIRELEEKRKEK 168


>08_01_0680 - 5958066-5960253,5960707-5961503
          Length = 994

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +3

Query: 297 QMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITD 416
           + L+ L+    T++  + K + FL++  P +  + EK+ D
Sbjct: 18  EKLTKLVEDKCTNLVGMSKNIVFLKDELPTMSALLEKLED 57


>02_05_0562 -
           29970207-29970224,29970290-29970364,29971083-29971441,
           29971572-29971713,29971906-29972025,29972139-29972216,
           29972330-29972429,29972522-29972571,29972827-29972904,
           29973624-29973751,29973776-29973977,29974045-29974144,
           29974236-29974551,29974645-29974690,29975526-29975622,
           29977254-29977258,29977643-29977708,29978631-29978690,
           29979167-29979272,29979513-29979658,29980731-29980813,
           29980951-29981056,29996243-29996266,29996378-29996438,
           29996467-29996750,29996914-29997096
          Length = 1010

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
 Frame = +3

Query: 435 CADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVG-DWGHEYVRQLEGEIAEEWNIEN 611
           C + I  + +   G LEV +           ++  +  D+   Y+   + ++A E  I N
Sbjct: 269 CLEYIKYIILPWFGNLEVVQNEWNGSTKTFVSMEELSVDYERGYLNSADVKMALEKAINN 328

Query: 612 MDSLLPLVRDVITFDMKHSAEIQACDLLMEI--DRLDLLTQHMDQSNYPRVCLYLIGCAS 785
              +L  VRD  + + K  A I AC L  EI  D L +  Q+ +  ++ R  L   G  S
Sbjct: 329 ---ILEPVRDYFSGNTKAQALIMACQLQNEITGDVLKIQMQNKEMRHH-RQRLRDSGATS 384

Query: 786 YVV 794
           Y++
Sbjct: 385 YLL 387


>02_02_0592 -
           11934238-11934249,11934755-11934835,11935166-11935324,
           11936362-11936442,11936523-11936591,11937147-11937260,
           11937805-11937858,11938788-11938915,11940527-11940782
          Length = 317

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 25/102 (24%), Positives = 44/102 (43%)
 Frame = +3

Query: 294 LQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMGVS 473
           L+  +N +  ++  + ++   ++ L   Y + K+   K   E   K   D + +L   V 
Sbjct: 96  LKSKANNLEENSNLIGTMEHDIEILMNKYESTKKSQSKSYPESNVKALEDEVQLLWRVVR 155

Query: 474 GTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEW 599
              E A+  E L     G    V     E V+++EG IAE+W
Sbjct: 156 KMNENADSIESLAN---GAEKRVESLSSE-VKKMEGVIAEQW 193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,233,670
Number of Sequences: 37544
Number of extensions: 355684
Number of successful extensions: 865
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)