Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_G04
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome, ma... 232 1e-60
BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome, ma... 232 1e-60
BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome, ma... 232 1e-60
BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome, ma... 232 1e-60
X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein. 231 3e-60
D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subu... 230 4e-60
AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPa... 230 4e-60
U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor typ... 207 4e-53
BC105730-1|AAI05731.1| 300|Homo sapiens FAM137B protein protein. 30 9.6
BC066973-1|AAH66973.2| 309|Homo sapiens family with sequence si... 30 9.6
>BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 232 bits (567), Expect = 1e-60
Identities = 113/227 (49%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 44 ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 103
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 104 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 157
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 158 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 217
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L+ L + +F + E
Sbjct: 218 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPE 264
>BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 232 bits (567), Expect = 1e-60
Identities = 113/227 (49%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 44 ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 103
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 104 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 157
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 158 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 217
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L+ L + +F + E
Sbjct: 218 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPE 264
>BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 232 bits (567), Expect = 1e-60
Identities = 113/227 (49%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 44 ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 103
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 104 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 157
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 158 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 217
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L+ L + +F + E
Sbjct: 218 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPE 264
>BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 232 bits (567), Expect = 1e-60
Identities = 113/227 (49%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 44 ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 103
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 104 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 157
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 158 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 217
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L+ L + +F + E
Sbjct: 218 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPE 264
>X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein.
Length = 900
Score = 231 bits (565), Expect = 3e-60
Identities = 113/227 (49%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 35 ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 94
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 95 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 148
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 149 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 208
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L+ L + +F + E
Sbjct: 209 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFTRFPE 255
>D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subunit
p97 protein.
Length = 908
Score = 230 bits (563), Expect = 4e-60
Identities = 112/227 (49%), Positives = 160/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL ML ++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 44 ELSEEDKQLQDELEMLAERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 103
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 104 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 157
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 158 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 217
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L+ L + +F + E
Sbjct: 218 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPE 264
>AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPase
subunit 2 variant protein.
Length = 913
Score = 230 bits (563), Expect = 4e-60
Identities = 113/227 (49%), Positives = 160/227 (70%), Gaps = 6/227 (2%)
Frame = +3
Query: 201 DLSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 380
+LSEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 49 ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHY 108
Query: 381 PALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHE 560
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHE
Sbjct: 109 GKLKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHE 162
Query: 561 YVRQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLL 722
YVR L GE+A+EW + E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L
Sbjct: 163 YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDML 222
Query: 723 TQHMDQSNYPRVCLYLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
+ +D++ Y +VCLYL C +YV EPE++ L L + +F + E
Sbjct: 223 EKDIDENAYAKVCLYLTSCVNYVPEPENSALLCCALGVFRKFSRFPE 269
>U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor type 1
receptor associated protein protein.
Length = 853
Score = 207 bits (506), Expect = 4e-53
Identities = 102/213 (47%), Positives = 147/213 (69%), Gaps = 6/213 (2%)
Frame = +3
Query: 243 MLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEK 422
MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY LK++YE + +
Sbjct: 1 MLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGE 60
Query: 423 TKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEW- 599
K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYVR L GE+A+EW
Sbjct: 61 NKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQ 114
Query: 600 ---NIENM--DSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCL 764
+ E + + LL LV++++ ++M H+AE +ACDLLMEI+++D+L + +D++ +VCL
Sbjct: 115 ELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENASAKVCL 174
Query: 765 YLIGCASYVVEPESTQXLQGVLXTYLRFGEYQE 863
YL C +YV EPE++ L+ L + +F + E
Sbjct: 175 YLTSCVNYVPEPENSALLRCALGVFRKFSRFPE 207
>BC105730-1|AAI05731.1| 300|Homo sapiens FAM137B protein protein.
Length = 300
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 640 SRTSGKSESMFSIFHSSAISPSNCLTYSCPQ---SPTFDNVPRRQYFKHSLF 494
S+ SGK + + +AI NC +Y P SP N+P R HSL+
Sbjct: 224 SQLSGKPQLTADRNNDTAIEIDNCSSYKIPSPVASPINLNIPMRAALSHSLW 275
>BC066973-1|AAH66973.2| 309|Homo sapiens family with sequence
similarity 137, member B protein.
Length = 309
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 640 SRTSGKSESMFSIFHSSAISPSNCLTYSCPQ---SPTFDNVPRRQYFKHSLF 494
S+ SGK + + +AI NC +Y P SP N+P R HSL+
Sbjct: 233 SQLSGKPQLTADRNNDTAIEIDNCSSYKIPSPVASPINLNIPMRAALSHSLW 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,201,359
Number of Sequences: 237096
Number of extensions: 2142094
Number of successful extensions: 5411
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5395
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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