Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G03
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   7.4  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 486 HETGCPPYILNWNPETPNNKYCI 418
           HET C  Y   WN  T   + CI
Sbjct: 108 HETSCTRYWTCWN-GTATEQLCI 129


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 202 VCAVTRDPKNRPWLVAFIITASKCPLKKRNFKMFGIDFRN 321
           +C +  DP+N     AF +     P K++   +F +   N
Sbjct: 341 ICTLLNDPQNAKTQKAFQVKRVPDPSKRKGSYIFRLPDEN 380


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 321 WLHCICVVTFDLELGQAMESVFPPG 395
           W HC CV+   +E G    +   PG
Sbjct: 149 WSHCQCVLADGVERGILTANRMIPG 173


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 321 WLHCICVVTFDLELGQAMESVFPPG 395
           W HC CV+   +E G    +   PG
Sbjct: 149 WSHCQCVLADGVERGILTANRMIPG 173


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 374 HCLTKL*IECYYTYTMQPFRKSIPNIL 294
           +  T L + CY TY   P   +  NI+
Sbjct: 138 YIFTYLSVTCYVTYAWSPIDHTESNII 164


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 630 YFQKSIILLSRLPFINLFYKVIQLIAPK 713
           ++  ++IL  R   INL  K  +  +PK
Sbjct: 50  FYMYTLILEERFKLINLIIKQEEFFSPK 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,837
Number of Sequences: 336
Number of extensions: 5023
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)