Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G03
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0431 - 8384259-8384266,8384649-8384787,8385875-8386067,838...    96   4e-20
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142...    29   3.7  
05_07_0035 - 27221338-27221433,27221510-27221599,27222056-272221...    28   8.6  

>03_02_0431 -
           8384259-8384266,8384649-8384787,8385875-8386067,
           8386180-8387702
          Length = 620

 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
 Frame = +3

Query: 315 SEWLHCICVVTFDLELGQAMESVFPPGV--PLTDQEKCNICYLAFPDSNSGCMGD--TQF 482
           + W    CV+ FDLE GQ +E+ +PPG     T  ++  + + +FPDS S  +    +  
Sbjct: 28  ARWARAFCVIRFDLERGQLVEACYPPGALASATGLDRL-VAFSSFPDSMSHHLPRHRSSV 86

Query: 483 HVRLRSFMSLTPQQLAYNEDSVPTLRADLTHYWGFVYFRQVKDSSLPRGYFQKSIILLSR 662
           H  L SF    P   A    SVP  R    +  GFV+ RQ +D  LPRG  QKS+++LS 
Sbjct: 87  HDSLFSFRVPGPSPSA----SVPGSRRGFLY--GFVFNRQRQDERLPRGGEQKSVVILSH 140

Query: 663 LPFINLFYKVIQLIAPKHFEDGESSLEAACHDINRWPSLKAGQNVLLPVLGTVFQSYIP 839
            P+ +LF  ++Q++ P  F+ G S+L      +  WP+   G+ + LP+     + ++P
Sbjct: 141 APYSSLFRLLLQILGPLCFDVGPSALSMVASHVAAWPAPVPGRPMELPIGSAALRVHLP 199


>04_04_1500 +
           34010819-34011016,34013267-34013308,34014195-34014204,
           34014526-34014586,34014621-34014678,34015266-34015412,
           34015643-34016205,34018942-34019728
          Length = 621

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 737 ATFTIFEVFWSYELNNFVEQIDERQSAQ 654
           + FT+FE +W++ELNN  +   ER   Q
Sbjct: 68  SNFTVFERYWNWELNNSSQWRAERIKQQ 95


>05_07_0035 -
           27221338-27221433,27221510-27221599,27222056-27222115,
           27222231-27222523,27222601-27222757,27222917-27223261,
           27223890-27224020,27224119-27224596,27224817-27225563
          Length = 798

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 396 LRVGRRFPLLDQALNRMLLHIYNATIPKIYSKHFEIPFLQRTLRRRNYE 250
           L VG R  + D  +  M LH  +  + K+ +K   +PF++ T R   YE
Sbjct: 617 LPVGIR-GVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYE 664


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,517,632
Number of Sequences: 37544
Number of extensions: 492146
Number of successful extensions: 1157
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)