Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_G02
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 77 1e-14
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 40 0.002
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 37 0.016
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 36 0.037
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 36 0.048
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 36 0.048
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 36 0.048
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 35 0.064
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 33 0.26
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 32 0.60
AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical ... 31 1.0
U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 31 1.4
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 31 1.4
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 31 1.4
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 31 1.4
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 30 2.4
Z81557-12|CAB04532.2| 277|Caenorhabditis elegans Hypothetical p... 29 3.2
U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81523-12|CAH60774.1| 364|Caenorhabditis elegans Hypothetical p... 29 5.5
Z81086-10|CAH60775.1| 364|Caenorhabditis elegans Hypothetical p... 29 5.5
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 7.3
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 28 9.7
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 28 9.7
U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical p... 28 9.7
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 28 9.7
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 28 9.7
AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical... 28 9.7
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 28 9.7
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 77.4 bits (182), Expect = 1e-14
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 12/158 (7%)
Frame = +2
Query: 356 LNKDATQVVIAG-RNVFKVFSIEE--NDFTEVCNL---------RVGKNLNLNFSSIDVA 499
LN++ +VV++G R V ++ I+ ND E ++ R GK +N+ +S+ +V
Sbjct: 51 LNREKDRVVVSGIRGVLQIIKIQNSTNDLIEGPSIVKDLDMRVYRKGK-VNILYSAQNVK 109
Query: 500 WSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQ 679
W+ + + +AT ++NG++V WN+ R +S VF H+R+ + +H T P +L+SGS+
Sbjct: 110 WNQLYDQYIATTSSNGSIVCWNISRRNKS----VFKSHERSATCLDWHATTPYILVSGSR 165
Query: 680 DGMMKCFDLRMKEVARTFISNTXINPGRPVXSXQAHTF 793
D +K +D+R+K+ + S+ R V +A F
Sbjct: 166 DCTVKSYDMRVKDNHQLTFSDRNCESIRDVAMCKAPGF 203
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGR-SKQEHVFSDHKRTVNKVSFHLTEPALLIS 670
+AWS+++ LAT + +W + G+ + + + HK++V +++ TE LL S
Sbjct: 234 LAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLAS 293
Query: 671 GSQDGMMKCFDLR 709
S DG +K +D R
Sbjct: 294 CSADGSIKLWDTR 306
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 491 DVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQE-HVFSDHKRTVNKVSFHLTEPALLI 667
D+AWS E LA+ + +G++ +W+ + + V H+ VN +S++ E L++
Sbjct: 280 DLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHE-NLIV 338
Query: 668 SGSQDGMMKCFDLR 709
SG DG +K + L+
Sbjct: 339 SGGDDGELKIWSLK 352
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 512 EENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDGMM 691
+ + L +A T+ V VW++ + F H VN V + P ++ S S DG +
Sbjct: 90 DSSHLVSAGTDKTVRVWDMETGSCIRN---FKSHTDIVNSVDVNRRGPQMICSASDDGTV 146
Query: 692 KCFDLRMKEVARTFI 736
D+R KE A+ FI
Sbjct: 147 MVHDMRSKEAAKKFI 161
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGR----SGRSKQEHVFSDHKRTVNKVSFHLTEPAL 661
++WS E L TA +G + W++ SG+ + F H VSFH +
Sbjct: 177 MSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFV 236
Query: 662 LISGSQDGMMKCFDLRMKEVARTFISNT 745
S D + +DLR + T + +T
Sbjct: 237 FGSVGDDRKLNLWDLRQSKPQLTAVGHT 264
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 488 IDVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVS-FHLTEPALL 664
+ +A + + NT ATA+ + V VW G + H++ VN V +H E +
Sbjct: 146 MQIAINPKDNNTFATASLDKTVKVWQF---GSNVPNFTLEGHEKGVNCVDYYHGGEKPYI 202
Query: 665 ISGSQDGMMKCFDLRMKEVART 730
ISG+ D ++K +D + K +T
Sbjct: 203 ISGADDHLVKIWDYQNKTCVQT 224
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 488 IDVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLI 667
I +AW+ I + LA+ + VV+W+L +K + D + + +H E L+
Sbjct: 250 ISLAWNRITTHVLASGGADKTVVLWDL---DEAKPAQIIPDQGGEIQTMKWHPNESTFLL 306
Query: 668 SGSQDGMMKCFDLR 709
G+ G + D R
Sbjct: 307 LGTMKGQVNVVDCR 320
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/118 (20%), Positives = 48/118 (40%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISG 673
+AW + N L TA + +WN+G +G + E S H + ++F+ + + ++
Sbjct: 135 IAWHPVANNVLLTAGGENVMFMWNVG-TGEALLE--ISGHPDQIWSINFNF-DGSQFVTT 190
Query: 674 SQDGMMKCFDLRMKEVARTFISNTXINPGRPVXSXQAHTFAXXXRERQRPXVGREAPE 847
+D ++ D EV + + + P R + + +R APE
Sbjct: 191 CKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTGFTKRSERLYALRAPE 248
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 488 IDVAWSTIEENTLATAATNGAVVVWNLGRSG--RSKQEHV--FSDHKRTVNKVSFH-LTE 652
++VAWS +N +A+ + + VW + G R+ E + H++ VN +++H +
Sbjct: 83 LEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVAN 142
Query: 653 PALLISGSQDGM 688
LL +G ++ M
Sbjct: 143 NVLLTAGGENVM 154
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/118 (20%), Positives = 48/118 (40%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISG 673
+AW + N L TA + +WN+G +G + E S H + ++F+ + + ++
Sbjct: 135 IAWHPVANNVLLTAGGENVMFMWNVG-TGEALLE--ISGHPDQIWSINFNF-DGSQFVTT 190
Query: 674 SQDGMMKCFDLRMKEVARTFISNTXINPGRPVXSXQAHTFAXXXRERQRPXVGREAPE 847
+D ++ D EV + + + P R + + +R APE
Sbjct: 191 CKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTGFTKRSERLYALRAPE 248
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 488 IDVAWSTIEENTLATAATNGAVVVWNLGRSG--RSKQEHV--FSDHKRTVNKVSFH-LTE 652
++VAWS +N +A+ + + VW + G R+ E + H++ VN +++H +
Sbjct: 83 LEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVAN 142
Query: 653 PALLISGSQDGM 688
LL +G ++ M
Sbjct: 143 NVLLTAGGENVM 154
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/118 (20%), Positives = 48/118 (40%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISG 673
+AW + N L TA + +WN+G +G + E S H + ++F+ + + ++
Sbjct: 135 IAWHPVANNVLLTAGGENVMFMWNVG-TGEALLE--ISGHPDQIWSINFNF-DGSQFVTT 190
Query: 674 SQDGMMKCFDLRMKEVARTFISNTXINPGRPVXSXQAHTFAXXXRERQRPXVGREAPE 847
+D ++ D EV + + + P R + + +R APE
Sbjct: 191 CKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTGFTKRSERLYALRAPE 248
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 488 IDVAWSTIEENTLATAATNGAVVVWNLGRSG--RSKQEHV--FSDHKRTVNKVSFH-LTE 652
++VAWS +N +A+ + + VW + G R+ E + H++ VN +++H +
Sbjct: 83 LEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVAN 142
Query: 653 PALLISGSQDGM 688
LL +G ++ M
Sbjct: 143 NVLLTAGGENVM 154
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/118 (20%), Positives = 48/118 (40%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISG 673
+AW + N L TA + +WN+G +G + E S H + ++F+ + + ++
Sbjct: 135 IAWHPVANNVLLTAGGENVMFMWNVG-TGEALLE--ISGHPDQIWSINFNF-DGSQFVTT 190
Query: 674 SQDGMMKCFDLRMKEVARTFISNTXINPGRPVXSXQAHTFAXXXRERQRPXVGREAPE 847
+D ++ D EV + + + P R + + +R APE
Sbjct: 191 CKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTGFTKRSERLYALRAPE 248
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 488 IDVAWSTIEENTLATAATNGAVVVWNLGRSG--RSKQEHV--FSDHKRTVNKVSFH-LTE 652
++VAWS +N +A+ + + VW + G R+ E + H++ VN +++H +
Sbjct: 83 LEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVAN 142
Query: 653 PALLISGSQDGM 688
LL +G ++ M
Sbjct: 143 NVLLTAGGENVM 154
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 593 EHVFSDHKRTVNKVSFHLTEPALLISGSQDGMMK 694
+HV H R VN V+FH T P +L+SGS D +K
Sbjct: 200 KHVLEGHDRGVNWVAFHHTNP-ILVSGSDDRQVK 232
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 491 DVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLIS 670
DVAW + + + + +++W++ S H H VN ++F+ +L +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWDV---RTSTPGHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 671 GSQDGMMKCFDLR 709
GS D + +DLR
Sbjct: 284 GSADKTVALWDLR 296
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEH-----------VFSDHKRTVNKVSF 640
V WS E LA++ T+ + VW+L + G + + H ++ S+
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 374
Query: 641 HLTEPALLISGSQDGMMKCFDL 706
+ EP ++ S S+D +++ + +
Sbjct: 375 NPNEPWVVCSVSEDNILQVWQM 396
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 491 DVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLIS 670
DVAW + + + + +++W++ S H H VN ++F+ +L +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWDV---RTSTPGHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 671 GSQDGMMKCFDLR 709
GS D + +DLR
Sbjct: 284 GSADKTVALWDLR 296
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEH-----------VFSDHKRTVNKVSF 640
V WS E LA++ T+ + VW+L + G + + H ++ S+
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 374
Query: 641 HLTEPALLISGSQDGMMKCFDL 706
+ EP ++ S S+D +++ + +
Sbjct: 375 NPNEPWVVCSVSEDNILQVWQM 396
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 491 DVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLIS 670
DVAW + + + + +++W++ S H H VN ++F+ +L +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWDV---RTSTPGHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 671 GSQDGMMKCFDLR 709
GS D + +DLR
Sbjct: 284 GSADKTVALWDLR 296
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Frame = +2
Query: 494 VAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEH-----------VFSDHKRTVNKVSF 640
V WS E LA++ T+ + VW+L + G + + H ++ S+
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 374
Query: 641 HLTEPALLISGSQDGMMKCFDL 706
+ EP ++ S S+D +++ + +
Sbjct: 375 NPNEPWVVCSVSEDNILQVWQM 396
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 35.1 bits (77), Expect = 0.064
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +2
Query: 506 TIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDG 685
T + ++L + T+ +V VW++ +++ F H VN V L+ S S DG
Sbjct: 90 TTDSSSLVSCGTDKSVRVWDMETGTCARR---FRTHTDFVNAVHPSRRGVTLVASASDDG 146
Query: 686 MMKCFDLRMKEVARTF 733
+ D+R KE +T+
Sbjct: 147 TCRVHDMRTKEPVKTY 162
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 608 DHKRTVNKVSFHLTEPALLISGSQDGMMKCFDLRMKEVARTFISNTXINPGR 763
DH VN V FH + ++LISGS D +K FD V + + + + P R
Sbjct: 168 DHVDDVNTVIFHPRD-SILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVR 218
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 530 TAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDGMMKCFDLR 709
T A + V +W+L + F H V ++F L +GS+DG +K +DLR
Sbjct: 355 TGAADAVVKIWDLKNQTVAA---AFPGHTAAVRSIAFS-ENGYYLATGSEDGEVKLWDLR 410
Query: 710 MKEVARTF 733
+ +TF
Sbjct: 411 KLKNLKTF 418
>AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical
protein T05A8.5 protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +2
Query: 509 IEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDGM 688
I +++L A NG + W VF HK V V + E + SGS+D
Sbjct: 108 IAKHSLIAAGRNGTLTHWMFNHEPGDLPNVVFDGHKFGVTGV-VSINENQFM-SGSRDCS 165
Query: 689 MKCFDLRMKEVART 730
+K +DL + RT
Sbjct: 166 VKIWDLESAKCVRT 179
>U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical
protein F33G12.2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +2
Query: 497 AWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGS 676
A S+ + + +A + A V+++ +G KQ + H VN V+F+ E +++ SGS
Sbjct: 64 AASSSDNSQIAAGGADRACTVFDV-ETG--KQLRRWRTHGAQVNAVAFN-EESSVVFSGS 119
Query: 677 QDGMMKCFDLRMK 715
D M+ FD R +
Sbjct: 120 MDCTMQAFDCRSR 132
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 503 STIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQD 682
+ ++ LATA +G V WNL S+ ++ ++ + + + L++ S D
Sbjct: 106 TALKSQQLATADESGEVKTWNLDPEVASENANIRKWQEQDEDINDLKVDVKSNLLATSSD 165
Query: 683 GMMKCFDLR 709
G + +DLR
Sbjct: 166 GTLGAYDLR 174
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 503 STIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQD 682
+ ++ LATA +G V WNL S+ ++ ++ + + + L++ S D
Sbjct: 106 TALKSQQLATADESGEVKTWNLDPEVASENANIRKWQEQDEDINDLKVDVKSNLLATSSD 165
Query: 683 GMMKCFDLR 709
G + +DLR
Sbjct: 166 GTLGAYDLR 174
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +2
Query: 524 LATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDGMMKCFD 703
+A+A+ + +V +W GR+G+ H V +V++ + LL+SGS D +K F+
Sbjct: 375 IASASFDKSVKLW-CGRTGKYLAS--LRGHVGPVYQVAWS-ADSRLLVSGSADSTLKVFE 430
Query: 704 LRMKEV 721
L+ K +
Sbjct: 431 LKTKSL 436
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +2
Query: 464 NLNLNFSS-----IDVAWSTIEENTLATAATNGAVVVWNL 568
NL +F S +DVAWS + A+ +G + VWNL
Sbjct: 522 NLKFSFESHPDLVLDVAWSPVHPAVFASIDADGNIFVWNL 561
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 608 DHKRTVNKVSFHLTEPALLISGSQDGMMKCFDLRMKEVARTF 733
+HK +V V F+ LL +G +D ++K +D+RM + RT+
Sbjct: 301 EHKSSVMAVEFNKNGNWLL-TGGRDHLVKMYDIRMMKEMRTY 341
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +2
Query: 491 DVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLIS 670
D+AW + E+ A G ++ + + RT+N V F T P +IS
Sbjct: 108 DIAWDS--ESKRIAAVGEGKERFGHVFLLDTTTSNGSLTGQSRTMNSVDFKPTRPFRIIS 165
Query: 671 GSQDGMMKCFD 703
GS D + F+
Sbjct: 166 GSDDNTVAIFE 176
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +2
Query: 488 IDVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLI 667
+ VAWS + LAT + + +V++W++ + G + +VN V + + ++
Sbjct: 529 LTVAWSP-DNQRLATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRW--LDETTVV 585
Query: 668 SGSQDGMMKCFDL 706
S QD +K +++
Sbjct: 586 SAGQDSNIKFWNV 598
>Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical
protein F38A6.2 protein.
Length = 891
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 512 EENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDGMM 691
E + + T +NG + +W+ +KQ H S H V S L + ++SG +D M+
Sbjct: 511 ENDQVVTGDSNGTISIWDPRTCKTTKQAH--SVHPGGV--YSLTLAKSGKILSGGKDRMV 566
Query: 692 KCFDLR 709
+DL+
Sbjct: 567 SEWDLQ 572
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/68 (22%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 365 DATQVVIAGRNVF-KVFSIEENDFTEVCNLRVGKNLNLNFSSIDVAWSTIEENTLATAAT 541
DA+Q++++ ++ V ++ FT ++ ++ N+ +S+D W+ ++ + ++
Sbjct: 221 DASQLIVSSQSQHASVIQKWDSRFTST-PVKEYRHHNMGITSVD--WNKADDRLVISSGC 277
Query: 542 NGAVVVWN 565
+G VV+WN
Sbjct: 278 DGQVVIWN 285
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/68 (22%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 365 DATQVVIAGRNVF-KVFSIEENDFTEVCNLRVGKNLNLNFSSIDVAWSTIEENTLATAAT 541
DA+Q++++ ++ V ++ FT ++ ++ N+ +S+D W+ ++ + ++
Sbjct: 221 DASQLIVSSQSQHASVIQKWDSRFTST-PVKEYRHHNMGITSVD--WNKADDRLVISSGC 277
Query: 542 NGAVVVWN 565
+G VV+WN
Sbjct: 278 DGQVVIWN 285
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 442 HFREIIFFNRKNLEHISSGYYDLC 371
HFR I FN ++H+S G DLC
Sbjct: 530 HFRLFIEFNNGMVQHLSQGIEDLC 553
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 442 HFREIIFFNRKNLEHISSGYYDLC 371
HFR I FN ++H+S G DLC
Sbjct: 530 HFRLFIEFNNGMVQHLSQGIEDLC 553
>Z81557-12|CAB04532.2| 277|Caenorhabditis elegans Hypothetical
protein F59A1.8 protein.
Length = 277
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = +1
Query: 127 TENKTDMCIC----DKSENKYRNLSIKL 198
TEN+T + IC +K+ENKYR++ +K+
Sbjct: 44 TENETILYICTKYKEKTENKYRDMELKI 71
>U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical
protein F41C3.6 protein.
Length = 250
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +2
Query: 485 SIDVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALL 664
++DVA +E L + + G V VW L +GR ++ +F+ + K+ ++ ++
Sbjct: 174 TVDVA---CDEENLYSLTSAGVVSVWKLKPNGRKYRDQLFTTYLNHCTKLLLTYSQKFVI 230
Query: 665 ISGSQ 679
++ S+
Sbjct: 231 LTNSE 235
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 491 DVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLIS 670
+VA+ E+T+ TA NG + VW+L + + + H +N + F EP +++S
Sbjct: 235 NVAFRDDGESTMVTADKNGTMAVWDLEK--QELIGKITGIHSDEINCLYFVPGEP-IMLS 291
Query: 671 GSQDGMMK 694
S D ++
Sbjct: 292 ASLDNSLR 299
>Z81523-12|CAH60774.1| 364|Caenorhabditis elegans Hypothetical
protein F32H2.11 protein.
Length = 364
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -2
Query: 251 VHYFCLHYVICIYIQIYINLMLRLRYLFSDLSQIHISVLFSVFVN*SYNYLS 96
VHY H C++ + ++ L R +F D+ + IS F + SY +L+
Sbjct: 4 VHYKIRH--CCLFFLLLFSICLFTRLIFDDIQYVPISERFPISRATSYRHLN 53
>Z81086-10|CAH60775.1| 364|Caenorhabditis elegans Hypothetical
protein F32H2.11 protein.
Length = 364
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -2
Query: 251 VHYFCLHYVICIYIQIYINLMLRLRYLFSDLSQIHISVLFSVFVN*SYNYLS 96
VHY H C++ + ++ L R +F D+ + IS F + SY +L+
Sbjct: 4 VHYKIRH--CCLFFLLLFSICLFTRLIFDDIQYVPISERFPISRATSYRHLN 53
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +1
Query: 304 PSNTICVSEEGPANALXAK*RCNTSR---NSRKKCVQ 405
PSNT+CV ++ L K C R S KKC+Q
Sbjct: 1598 PSNTVCVPDQDKNGILIPKCLCGPGRFFEVSTKKCMQ 1634
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 467 LNLNFSSIDVAWSTIEENTLATAATN-GAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFH 643
LN ID+AW E + LA A N G + +W++ E + K +++
Sbjct: 71 LNPTGKLIDIAWDK-EGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWS 129
Query: 644 LTEPALLISGSQDGMMKCFDLR 709
+ P L+I G+ G + ++ R
Sbjct: 130 PSTPTLVI-GNNAGNIVVYNHR 150
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 467 LNLNFSSIDVAWSTIEENTLATAATN-GAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFH 643
LN ID+AW E + LA A N G + +W++ E + K +++
Sbjct: 71 LNPTGKLIDIAWDK-EGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWS 129
Query: 644 LTEPALLISGSQDGMMKCFDLR 709
+ P L+I G+ G + ++ R
Sbjct: 130 PSTPTLVI-GNNAGNIVVYNHR 150
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 524 LATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDGMMKCFD 703
L + A + + VW L K H+ V+ V+FH T P +I+GS D K ++
Sbjct: 347 LISVADDKTLRVWELSAQRCMK---AIEAHEHFVSTVAFHQTSP-FVITGSVDMSCKVWE 402
Query: 704 LR 709
R
Sbjct: 403 CR 404
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 611 HKRTVNKVSFHLTEPALLISGSQDGMMKCFDLRMKEVARTFISN 742
H V+ VSF+ + +L+ SGS DG+++ +D + +T + +
Sbjct: 212 HSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +2
Query: 524 LATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQ 679
+A ++NG++ VWN R+ ++ + S+ + + +S++ T LL S Q
Sbjct: 522 VAAGSSNGSIFVWN--RNSTKLEKQLCSNSENAIFSLSWNPTGYGLLSSSKQ 571
>U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical
protein C25H3.11 protein.
Length = 947
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 509 IEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHK 616
++E T T TNG + W G G+++Q+ D+K
Sbjct: 481 VDEPTAPTEPTNGGLYGWITGFFGQAQQDEKQEDNK 516
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 467 LNLNFSSIDVAWSTIEENTLATAATN-GAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFH 643
LN ID+AW E + LA A N G + +W++ E + K +++
Sbjct: 71 LNPTGKLIDIAWDK-EGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWS 129
Query: 644 LTEPALLISGSQDGMMKCFDLR 709
+ P L+I G+ G + ++ R
Sbjct: 130 PSTPTLVI-GNNAGNIVVYNHR 150
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 524 LATAATNGAVVVWNLGRSGRSKQEHVFSDHKRTVNKVSFHLTEPALLISGSQDGMMKCFD 703
L + A + + VW L K H+ V+ V+FH T P +I+GS D K ++
Sbjct: 347 LISVADDKTLRVWELSAQRCMK---AIEAHEHFVSTVAFHQTSP-FVITGSVDMSCKVWE 402
Query: 704 LR 709
R
Sbjct: 403 CR 404
>AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical
protein Y110A7A.9b protein.
Length = 908
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +2
Query: 446 NLRVGKNLNLNF--SSIDVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKR 619
++R GK +N + +S + +++ LA G +VVW+LGR +S+Q S H R
Sbjct: 473 HVRDGKIVNTQWKSASAQICAMAWKDDILAVGDVEGNLVVWDLGRR-QSRQVRDVS-HSR 530
Query: 620 TVNKVSF 640
V++++F
Sbjct: 531 -VHRMTF 536
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +2
Query: 446 NLRVGKNLNLNF--SSIDVAWSTIEENTLATAATNGAVVVWNLGRSGRSKQEHVFSDHKR 619
++R GK +N + +S + +++ LA G +VVW+LGR +S+Q S H R
Sbjct: 584 HVRDGKIVNTQWKSASAQICAMAWKDDILAVGDVEGNLVVWDLGRR-QSRQVRDVS-HSR 641
Query: 620 TVNKVSF 640
V++++F
Sbjct: 642 -VHRMTF 647
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,681,640
Number of Sequences: 27780
Number of extensions: 319840
Number of successful extensions: 801
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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