Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G02
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.7  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   4.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   8.2  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 256 LMCIIFVYITLF-VFIFKFTLI*CLDYDTYFPI 161
           +MC I  +  +F +++  F L+ C+  D Y+ +
Sbjct: 109 VMCRIMAFFRMFGLYLSSFVLV-CISMDRYYAV 140


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 467 NSFLLSNYTLP*NHFLQSK 411
           N ++L NYT P   FLQ +
Sbjct: 23  NDYILDNYTSPIVEFLQQE 41


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 439 FREIIFFNRKNLEHI 395
           FREI++F   NL H+
Sbjct: 438 FREILYFRCSNLNHM 452


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 775 GXNWTSRIDXRVAYKSSSNFL 713
           G NW S +   VAY + +N+L
Sbjct: 53  GINWRSYVVCDVAYNNVNNWL 73


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -3

Query: 454 SQITHFREIIFFNRKNLEHISSGYYDLCCIF 362
           +Q  H+R I+ F  +  ++ S  +  LC ++
Sbjct: 3   NQKEHYRHILLFYFRKGKNASQAHKKLCAVY 33


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 417 IEKTLNTFLPAITTCVASL 361
           I + L  F+PA+T  +ASL
Sbjct: 446 IVRALKPFIPAVTKSLASL 464


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 169 FPIYHKYTYQFCSXXXXXXXXXIFHGYNFRIFIFN 65
           FP+ ++Y     +          F+  NFRI I N
Sbjct: 369 FPLEYEYVLAVSNRIQKVIYGFDFNDVNFRILIAN 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,746
Number of Sequences: 438
Number of extensions: 4103
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)