Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_G01
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2 pro...    28   7.9  
AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1 pro...    28   7.9  

>U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical
           protein T05B11.4 protein.
          Length = 476

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 621 NFRLINLKNFLKISPLIVVSSEIDYNLSCILLLLIARILFQNK 493
           N     + NFLKI  L+ +     + L  ILLLL+   +F NK
Sbjct: 3   NLIFFQIDNFLKICSLVEMQRIYQFILIIILLLLLVFDIFTNK 45


>Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical
           protein F11A1.3d protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -3

Query: 191 NRNGIYVCRHXDIIXPCFPIFTXQTYDAALSRHNAXTS-XXXXHMVHTEFSPL 36
           N+   Y C    +     P ++    D +LSRHN+ +S     HM H+  S +
Sbjct: 333 NKRAAYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAI 385


>Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical
           protein F11A1.3b protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -3

Query: 191 NRNGIYVCRHXDIIXPCFPIFTXQTYDAALSRHNAXTS-XXXXHMVHTEFSPL 36
           N+   Y C    +     P ++    D +LSRHN+ +S     HM H+  S +
Sbjct: 308 NKRAAYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAI 360


>Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical
           protein F11A1.3a protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -3

Query: 191 NRNGIYVCRHXDIIXPCFPIFTXQTYDAALSRHNAXTS-XXXXHMVHTEFSPL 36
           N+   Y C    +     P ++    D +LSRHN+ +S     HM H+  S +
Sbjct: 367 NKRAAYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAI 419


>AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2
           protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -3

Query: 191 NRNGIYVCRHXDIIXPCFPIFTXQTYDAALSRHNAXTS-XXXXHMVHTEFSPL 36
           N+   Y C    +     P ++    D +LSRHN+ +S     HM H+  S +
Sbjct: 308 NKRAAYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAI 360


>AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1
           protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -3

Query: 191 NRNGIYVCRHXDIIXPCFPIFTXQTYDAALSRHNAXTS-XXXXHMVHTEFSPL 36
           N+   Y C    +     P ++    D +LSRHN+ +S     HM H+  S +
Sbjct: 367 NKRAAYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAI 419


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,442,098
Number of Sequences: 27780
Number of extensions: 316971
Number of successful extensions: 501
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)