Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_F22
(1022 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0433 + 3353255-3353374,3353532-3353828 107 1e-23
10_08_0018 + 14164103-14164225,14164596-14164892 102 5e-22
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 101 7e-22
05_05_0119 - 22512228-22512500,22512577-22512795 70 3e-12
12_02_0605 - 20924385-20924606,20924705-20924899 69 6e-12
03_05_0949 + 29089293-29089487,29089592-29089810 69 6e-12
03_02_0562 - 9469263-9469517,9469619-9469843 69 6e-12
12_02_0151 - 14468480-14468698,14468902-14469090 69 8e-12
07_03_0791 + 21539069-21539257,21539493-21539711 69 8e-12
07_03_0790 + 21536389-21536577,21536854-21537072 69 8e-12
05_01_0107 + 706936-707202,707231-707485 52 7e-07
06_01_0881 + 6754600-6754681,6754742-6755284,6755461-6755523,675... 31 1.1
03_01_0515 - 3864796-3865425 31 1.1
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 29 4.5
08_02_0735 + 20564451-20564525,20566346-20566561 29 7.9
06_03_0854 + 25400855-25403741,25406174-25407708 29 7.9
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 107 bits (257), Expect = 1e-23
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRIT 234
LQFPVGRIHR LK+R ++HGRVGATAAVYSAAILEYLTAEVLELAGNASKD KVKRIT
Sbjct: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT 96
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 102 bits (244), Expect = 5e-22
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRIT 234
+QFPVGRIHR LK R +++GRVGATAAVY+AAILEYLTAEVLELAGNASKD KVKRIT
Sbjct: 40 IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRIT 97
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 101 bits (243), Expect = 7e-22
Identities = 50/56 (89%), Positives = 52/56 (92%)
Frame = -1
Query: 401 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRIT 234
FPVGRIHR LK RT ++GRVGATAAVYSAAILEYLTAEVLELAGNASKD KVKRIT
Sbjct: 65 FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT 120
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 70.1 bits (164), Expect = 3e-12
Identities = 37/57 (64%), Positives = 42/57 (73%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGRI R+LK S R+G A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 35 LQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 90
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 68.9 bits (161), Expect = 6e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 68.9 bits (161), Expect = 6e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 68.9 bits (161), Expect = 6e-12
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGRI R+LK + R+G A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 37 LQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 92
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 68.5 bits (160), Expect = 8e-12
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 68.5 bits (160), Expect = 8e-12
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 68.5 bits (160), Expect = 8e-12
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 52.0 bits (119), Expect = 7e-07
Identities = 37/74 (50%), Positives = 42/74 (56%), Gaps = 17/74 (22%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE-----------------VLE 279
LQFPVGRI R+LK + RVG A VY AA+LEYL AE VLE
Sbjct: 34 LQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEASHCLSLPLPNPSKPSMVLE 92
Query: 278 LAGNASKDXKVKRI 237
LAGNA++D K RI
Sbjct: 93 LAGNAARDNKKNRI 106
>06_01_0881 +
6754600-6754681,6754742-6755284,6755461-6755523,
6755653-6755666
Length = 233
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 649 RPXXPPXQGSKIGGXPPLXXXPSLRXXTAPXXPXKKLXNXXLXGXP 786
RP PP Q +I G PPL P+++ P P + L + G P
Sbjct: 26 RPGLPPLQTIQIPGLPPLPPLPTIQIPCLP--PLQPLPTIQIPGLP 69
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +1
Query: 580 PSALGAPXPFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPPLXXXPSLRXXTAPXXP 747
P L P S P P GP + P PP + PPL P + P P
Sbjct: 48 PPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPP 103
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 571 YXLPSALGAPXPFRXSXPLPXLGPTVRPXX--PPXQGSKIGGXPPLXXXPSLRXXTAP 738
Y + ++ AP P++ +P P V P PP Q G PP P+ + TAP
Sbjct: 217 YGMAASPTAPSPYQYLGYMPAPAPAVTPTAVLPPAQQQITGPPPPFVQQPA-QHVTAP 273
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 299 LTAEVLELAGNASKDXKVKRI 237
L+ +VLELAGNA++D K RI
Sbjct: 22 LSIKVLELAGNAARDNKKTRI 42
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +1
Query: 580 PSALGAPXPFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPPLXXXPSLRXXTAPXXPXK 753
PSA P P + PL + P P S + PP+ P L A P K
Sbjct: 746 PSA-PTPAPASATAPLIQSNVVISPVPPTLAASGVAAWPPVPAIPELTTAAAAPLPEK 802
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,575,456
Number of Sequences: 37544
Number of extensions: 272153
Number of successful extensions: 627
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3001039372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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