Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_F22
(1022 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical p... 107 1e-23
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 71 1e-12
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 71 1e-12
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 71 1e-12
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 71 1e-12
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 71 1e-12
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 71 1e-12
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 71 1e-12
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 71 1e-12
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 71 1e-12
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 71 1e-12
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 71 1e-12
Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 29 4.0
AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like ... 29 4.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 4.0
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 7.1
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 7.1
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 7.1
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 7.1
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 7.1
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 7.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.3
>U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical
protein R08C7.3 protein.
Length = 140
Score = 107 bits (258), Expect = 1e-23
Identities = 54/58 (93%), Positives = 54/58 (93%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRIT 234
LQFPVGRIHR LK RTTS GRVGATAAVYSAAILEYLTAEVLELAGNASKD KVKRIT
Sbjct: 28 LQFPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT 85
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRI 237
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
>Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical
protein ZK1251.1 protein.
Length = 145
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = -1
Query: 407 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDXKVKRIT 234
L FPVGRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A+ + K R+T
Sbjct: 36 LTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRVT 93
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = -2
Query: 475 VVKRVKILVKPRRKLSQDQLEQDFSFPLEEFIGILRIGQQATGA*ELRQQFILPLFWNIL 296
+V R K ++ RR+ ++D++ + +EE I+ G Q+T ELR + WNI
Sbjct: 837 IVNRKKAILT-RRENNEDEIRESIR-DMEECDRIIE-GWQSTEIEELRAE------WNIK 887
Query: 295 QQRFWSWREMRLKI 254
F SW EM ++
Sbjct: 888 LSEFESWHEMMQQV 901
>AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like
protein protein.
Length = 555
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = -2
Query: 475 VVKRVKILVKPRRKLSQDQLEQDFSFPLEEFIGILRIGQQATGA*ELRQQFILPLFWNIL 296
+V R K ++ RR+ ++D++ + +EE I+ G Q+T ELR + WNI
Sbjct: 149 IVNRKKAILT-RRENNEDEIRESIR-DMEECDRIIE-GWQSTEIEELRAE------WNIK 199
Query: 295 QQRFWSWREMRLKI 254
F SW EM ++
Sbjct: 200 LSEFESWHEMMQQV 213
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = -2
Query: 475 VVKRVKILVKPRRKLSQDQLEQDFSFPLEEFIGILRIGQQATGA*ELRQQFILPLFWNIL 296
+V R K ++ RR+ ++D++ + +EE I+ G Q+T ELR + WNI
Sbjct: 837 IVNRKKAILT-RRENNEDEIRESIR-DMEECDRIIE-GWQSTEIEELRAE------WNIK 887
Query: 295 QQRFWSWREMRLKI 254
F SW EM ++
Sbjct: 888 LSEFESWHEMMQQV 901
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 604 PFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPP 699
PF S P P P+ P PP +G+ +G PP
Sbjct: 1066 PFTQSAPSPAPPPSTIP-LPPTRGASVGPGPP 1096
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 604 PFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPP 699
PF S P P P+ P PP +G+ +G PP
Sbjct: 1060 PFTQSAPSPAPPPSTIP-LPPTRGASVGPGPP 1090
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 604 PFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPP 699
PF S P P P+ P PP +G+ +G PP
Sbjct: 1066 PFTQSAPSPAPPPSTIP-LPPTRGASVGPGPP 1096
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 604 PFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPP 699
PF S P P P+ P PP +G+ +G PP
Sbjct: 1060 PFTQSAPSPAPPPSTIP-LPPTRGASVGPGPP 1090
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 604 PFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPP 699
PF S P P P+ P PP +G+ +G PP
Sbjct: 1060 PFTQSAPSPAPPPSTIP-LPPTRGASVGPGPP 1090
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 604 PFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPP 699
PF S P P P+ P PP +G+ +G PP
Sbjct: 1066 PFTQSAPSPAPPPSTIP-LPPTRGASVGPGPP 1096
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +1
Query: 577 LPSALGAPXPFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPPLXXXPSLRXXTAPXXP 747
LP G P P P P G P PP G GG PP P + AP P
Sbjct: 751 LPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKGGPPP-PPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +1
Query: 577 LPSALGAPXPFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPPLXXXPSLRXXTAPXXP 747
LP G P P P P G P PP G GG PP P + AP P
Sbjct: 751 LPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKGGPPP-PPPPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +1
Query: 577 LPSALGAPXPFRXSXPLPXLGPTVRPXXPPXQGSKIGGXPPLXXXPSLRXXTAPXXP 747
LP G P P P P G P PP G GG PP P + AP P
Sbjct: 334 LPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKGGPPP-PPPPGMFAPMAPVIP 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,179,861
Number of Sequences: 27780
Number of extensions: 217694
Number of successful extensions: 410
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2699257404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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