Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_F17
         (1175 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,...    32   1.8  
AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,...    32   1.8  

>AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,
           isoform A protein.
          Length = 2172

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 166 IQRPTATPKPHVGAGXRCIAGYPWQQVPLXTATS 65
           +Q P A P P+VG   R + G P QQ P  T T+
Sbjct: 527 MQMPQAPPPPNVGNLGRMLPGGPQQQTPTPTPTA 560


>AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,
           isoform B protein.
          Length = 2170

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 166 IQRPTATPKPHVGAGXRCIAGYPWQQVPLXTATS 65
           +Q P A P P+VG   R + G P QQ P  T T+
Sbjct: 527 MQMPQAPPPPNVGNLGRMLPGGPQQQTPTPTPTA 560


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,893,256
Number of Sequences: 53049
Number of extensions: 309269
Number of successful extensions: 656
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6229976970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)