Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_F16
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 247 1e-66
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 157 3e-39
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 143 3e-35
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 141 1e-34
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 139 6e-34
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 128 1e-30
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 106 5e-24
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 106 5e-24
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 52 1e-07
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 28 2.1
SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 2.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.6
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 6.4
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 8.4
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 247 bits (605), Expect = 1e-66
Identities = 131/230 (56%), Positives = 164/230 (71%)
Frame = +3
Query: 114 LQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGA 293
+ +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDGA
Sbjct: 8 IPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGA 67
Query: 294 TIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIR 473
TIMKLLDIVHPAAKTLVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++IR
Sbjct: 68 TIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIR 127
Query: 474 AVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAV 653
R A++LA+ KIKE A+ +D + RDLL KCASTAM+SKLI F+K+VVDAV
Sbjct: 128 GYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAV 187
Query: 654 LSLXTPLLPLDMIGIXXGPRWSS*XTLSWYPVWXFKKNFQLTLGFENAAK 803
L+L L +MIGI P + +L V FKK F GFE K
Sbjct: 188 LTLDQEDLNENMIGIKKVPGGAMEDSLLVKGV-AFKKTFSYA-GFEQQPK 235
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 157 bits (380), Expect = 3e-39
Identities = 79/177 (44%), Positives = 121/177 (68%), Gaps = 2/177 (1%)
Frame = +3
Query: 147 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 320
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 321 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLA 500
HPAAK LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+
Sbjct: 72 HPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT 131
Query: 501 IEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLXTP 671
++ +KE A+ I+ R+ LL+ A+T+++SK++ Q + + I VDAVL + P
Sbjct: 132 VDCMKENALAIE----LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDP 184
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 143 bits (347), Expect = 3e-35
Identities = 73/176 (41%), Positives = 111/176 (63%), Gaps = 1/176 (0%)
Frame = +3
Query: 144 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVH 323
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 324 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 503
PA K LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 504 EKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLXT 668
+ + + + +D+ E L+ A T+MSSK+I D FS + VDA+LS+ T
Sbjct: 135 KFMTDVLSCSVDSLGKES----LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKT 186
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 141 bits (341), Expect = 1e-34
Identities = 77/181 (42%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Frame = +3
Query: 126 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHN-GKAVISNDGATIM 302
+ E Q +G+ +S+ V D V++TLGP+GMDK++ ++ G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 303 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 482
K + + + AAK LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R
Sbjct: 68 KSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYR 127
Query: 483 TASRLAIEKIKEQAVKIDNKS-PEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS 659
A++ AI+ ++ A IDN S P + R L A T +SSK++ Q K+HF+++ VDAVL
Sbjct: 128 IATKTAIDALR--ASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLR 185
Query: 660 L 662
L
Sbjct: 186 L 186
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 139 bits (336), Expect = 6e-34
Identities = 68/177 (38%), Positives = 116/177 (65%)
Frame = +3
Query: 132 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 311
+E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 312 DIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTAS 491
++ H AK LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A
Sbjct: 84 EVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKAC 143
Query: 492 RLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 662
++A++ + + +D SPE + L + A T++ SK++ + DHF+ I VDAVLS+
Sbjct: 144 QVAVKHLDAISDVVD-FSPENTTN-LFRSAKTSLGSKVVSKAHDHFANIAVDAVLSV 198
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 128 bits (308), Expect = 1e-30
Identities = 62/155 (40%), Positives = 98/155 (63%)
Frame = +3
Query: 138 GTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 317
G Q K Q+ SNI A + V D +RT LGPR M K+++D G +++NDG I++ +++
Sbjct: 12 GNRQVGHKAQM-SNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEV 70
Query: 318 VHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRL 497
HPAAK+++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A
Sbjct: 71 AHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALED 130
Query: 498 AIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSK 602
A+ I E + ++ E L+ C T + ++
Sbjct: 131 ALSIIDEITLPVNVDDNAEMFRLIRTCIGTKLVAR 165
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 106 bits (254), Expect = 5e-24
Identities = 60/188 (31%), Positives = 102/188 (54%)
Frame = +3
Query: 126 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 305
LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 306 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRT 485
+ I +P A + A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++
Sbjct: 64 EMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNL 123
Query: 486 ASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLX 665
A A+ + + K D E R++LL A T++S+K+ + + + VVDA+L++
Sbjct: 124 AKNEALTFL--DSFKTDF---EVDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIR 178
Query: 666 TPLLPLDM 689
P P+D+
Sbjct: 179 RPDEPIDL 186
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 106 bits (254), Expect = 5e-24
Identities = 60/181 (33%), Positives = 105/181 (58%), Gaps = 2/181 (1%)
Frame = +3
Query: 126 LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 302
L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 303 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 482
+ L+++HPAAK +VD + Q+ E+GD VV+ GE+L + + + G+ P + +
Sbjct: 73 RELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYE 132
Query: 483 TASRLAIEKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS 659
A +E ++E A KI+ E++ L+K T +SSK + +D S +V A+L+
Sbjct: 133 MALSHTMEVLEEICADKIETVESEKE---LIKAIRTCISSKQ-YGNEDFLSDLVAKAILT 188
Query: 660 L 662
+
Sbjct: 189 V 189
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 51.6 bits (118), Expect = 1e-07
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +3
Query: 207 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAEV 374
AV TLGP+G + LI G I+ DG T+ + + + A+ + D+A +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVA 116
Query: 375 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 554
GDGTT+ +L I V G +P L R ++ A +E + QA K D + EE
Sbjct: 117 GDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QANKRDITTSEE 174
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/100 (22%), Positives = 39/100 (39%)
Frame = +3
Query: 141 TDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 320
T T + SN N+ LV D + P + + + + N A+ + +L+
Sbjct: 218 TTSTNTSTVIPSNPNSVFLV-DCTHSQC-PTDLPNIATTQHSLRYLDNASASAITVLERT 275
Query: 321 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFV 440
HPAA + + S + D + + + K PFV
Sbjct: 276 HPAASSTMATESSHQSPSADSQAEELSKSQRVAKDDDPFV 315
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +3
Query: 525 VKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLXT 668
V ++N PE ++ + C+ ++ Q DH ++V + + L T
Sbjct: 486 VYLENNDPEVRKTASITCSQLFARDPILSQTSDHAIQVVAEVLEKLLT 533
>SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 359
Score = 27.5 bits (58), Expect = 2.8
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = -3
Query: 789 QSQALTESFS*XATPGTRKESXKSSTGDLX*FQSCREAEVEXPKTGQHQQQS*RSDPSVD 610
+S+ L E++ TP KE S+ ++ + E K H + S D S
Sbjct: 126 KSKELIEAYEASKTPPDLKEE-SSTDEEMDSLSAAEEKPNFLQKRKYHWETS--LDESDA 182
Query: 609 ESVSMTSLLMHTSIGDLFVP 550
ES+S SL+ TSI +++ P
Sbjct: 183 ESISSGSLMSITSISEMYGP 202
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.6
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = -2
Query: 451 TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAMSTRVLAAG---*TISSNFMIVAPSF 281
T SST ++ ++ + PTS+S DF+ S +++G +I S F V+
Sbjct: 521 TSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSIL 580
Query: 280 -DITAFPL*STISLSIPRGPRVVLTASTTS*QALMLETSWGLPCVWSVPSLSKSICRLHF 104
T+ P +++S+S +AST+S ++ S + S P+ S S +
Sbjct: 581 SSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSIS-SSSTILSSPTPSTSSLMISS 639
Query: 103 ARFVS 89
+ +S
Sbjct: 640 SSIIS 644
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 441 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 575
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 426 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 575
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,342,936
Number of Sequences: 5004
Number of extensions: 66703
Number of successful extensions: 184
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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