Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_F12
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.                   32   2.4  
K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary ...    32   2.4  

>S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.
          Length = 382

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 24/79 (30%), Positives = 28/79 (35%)
 Frame = +2

Query: 503 PPXKXXAPGFWXGGXVXXPPXGGXXXXPKXGGXPXKKFXKKGPXKXXKPKKXPXGGFFXK 682
           PP K   P    G     PP  G    P   G    +  +  P K   P   P GG   +
Sbjct: 225 PPGKPQGPPPQGGNKSQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGP--PPQGGNQPQ 282

Query: 683 XPPP*KX*KXXXPN*RGGN 739
            PPP    K   P  +GGN
Sbjct: 283 GPPP-PPGKPQGPPPQGGN 300



 Score = 31.5 bits (68), Expect = 4.2
 Identities = 24/79 (30%), Positives = 28/79 (35%)
 Frame = +2

Query: 503 PPXKXXAPGFWXGGXVXXPPXGGXXXXPKXGGXPXKKFXKKGPXKXXKPKKXPXGGFFXK 682
           PP K   P    G     PP  G    P   G    +  +  P K   P   P GG   +
Sbjct: 163 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGP--PPQGGNQPQ 220

Query: 683 XPPP*KX*KXXXPN*RGGN 739
            PPP    K   P  +GGN
Sbjct: 221 GPPP-PPGKPQGPPPQGGN 238


>K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary
           proline-rich protein 1 gene, segment 1. ).
          Length = 173

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 24/79 (30%), Positives = 28/79 (35%)
 Frame = +2

Query: 503 PPXKXXAPGFWXGGXVXXPPXGGXXXXPKXGGXPXKKFXKKGPXKXXKPKKXPXGGFFXK 682
           PP K   P    G     PP  G    P   G    +  +  P K   P   P GG   +
Sbjct: 36  PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGKRSRSPRSPPGKPQGP--PPQGGNQPQ 93

Query: 683 XPPP*KX*KXXXPN*RGGN 739
            PPP    K   P  +GGN
Sbjct: 94  GPPP-PPGKPQGPPPQGGN 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,459,058
Number of Sequences: 237096
Number of extensions: 1444008
Number of successful extensions: 3626
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3294
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)