Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_F08
         (959 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/41 (31%), Positives = 13/41 (31%)
 Frame = -2

Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXP 431
           P P  P G    P   P P      P A  G  P   P  P
Sbjct: 209 PQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPP 249



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 17/68 (25%), Positives = 17/68 (25%), Gaps = 1/68 (1%)
 Frame = -2

Query: 559 PXPHPXXPPG-GPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXK 383
           P  H   P    P  P     P      PP   G      P  P  P P       P   
Sbjct: 166 PIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVP 225

Query: 382 PPKXPPXP 359
            P  P  P
Sbjct: 226 MPMRPQMP 233


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 17/79 (21%), Positives = 20/79 (25%)
 Frame = -2

Query: 478 PPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAX 299
           PP   G         P  P P           PP+  P P  +   P     P       
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPA 571

Query: 298 XXQGNPQPRPQFXDSTPPP 242
                P  +P      PPP
Sbjct: 572 GFPNLPNAQPPPAPPPPPP 590



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 14/53 (26%), Positives = 14/53 (26%)
 Frame = -2

Query: 574 PXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXP 416
           P    P P P  PP  P   G    P       P   G      P     P P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYP 633


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,295
Number of Sequences: 2352
Number of extensions: 5808
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105430005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)