Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_F08
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 41 0.001
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 41 0.001
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 41 0.001
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.003
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.005
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.005
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.005
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 39 0.006
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 38 0.008
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 38 0.008
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.011
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.011
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 38 0.014
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 37 0.025
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 37 0.025
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 36 0.033
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.057
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 35 0.075
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 35 0.099
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 35 0.099
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.099
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 35 0.099
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 35 0.099
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 34 0.13
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 34 0.13
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 34 0.17
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 33 0.23
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 33 0.30
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 33 0.30
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 33 0.40
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 33 0.40
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.53
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.53
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.70
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.70
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.70
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.70
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 31 0.93
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 31 0.93
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.2
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.2
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 30 2.8
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 30 2.8
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.8
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.8
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 3.7
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 3.7
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 3.7
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 3.7
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 3.7
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 4.9
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 4.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.9
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 25 6.1
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 6.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.5
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.6
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 28 8.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 8.6
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/94 (31%), Positives = 32/94 (34%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG P P G P P P P P KP + P
Sbjct: 104 PGPPGPAGAPGKPGKPGRPGAPGT--PGTPGKPPVA-PCEPTTPPPC-----KPCPQGPP 155
Query: 373 XPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPR 272
PP P G P TP R G+P PR
Sbjct: 156 GPPGPPGAPGDPGEAGTPG-RPGTDAAPGSPGPR 188
Score = 31.9 bits (69), Expect = 0.70
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P G P G P P A G P P P P
Sbjct: 182 PGSPGPRGP-PGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP-PGAPG 239
Query: 403 NXKPQXKP-PKXPPXPXXIQGXPXNXATP 320
N P P PK P P G P
Sbjct: 240 NDGPPGPPGPKGAPGPDGPPGVDGQSGPP 268
Score = 29.5 bits (63), Expect = 3.7
Identities = 32/139 (23%), Positives = 34/139 (24%)
Frame = -2
Query: 754 PXGXXGGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXX 575
P G G PPG A P G G G P
Sbjct: 151 PQGPPG--PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGT 208
Query: 574 PXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXK 395
P P PG P PG + P PP G P P P +
Sbjct: 209 PAISEPLT-----PGAPGEPGDSGPPG-----PPGPPGAPGNDGPPGPPGPKGAPGPDGP 258
Query: 394 PQXKPPKXPPXPXXIQGXP 338
P PP P G P
Sbjct: 259 PGVDGQSGPPGPPGPAGTP 277
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -3
Query: 585 PPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPXRXGP 454
PP P P PPGAP PG P GP
Sbjct: 144 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGP 187
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/117 (29%), Positives = 36/117 (30%), Gaps = 2/117 (1%)
Frame = +3
Query: 240 SGGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPC--MXXGXGGXLGGXXWGXXFXXX 413
+GGG CG GCG G +PC G GG GG
Sbjct: 25 AGGGGGGGGCGGGCG------GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Query: 414 XGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGGXXGWGXGXXXXGXXG 584
G G G G G GG G G G G GG G G G G G
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 31.5 bits (68), Expect = 0.93
Identities = 32/114 (28%), Positives = 32/114 (28%), Gaps = 3/114 (2%)
Frame = +3
Query: 243 GGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPCMXXGXGGXLGGXXWGXXFXXXXGX 422
GGG CG G G G G C G GG GG G G
Sbjct: 91 GGG--GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGC--GGGGGGCGGGGGGGCGGGSSGG 146
Query: 423 GXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXX---GPPGGXXGWGXGXXXXG 575
GS G G GG G G G P GG G G G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 200
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/111 (25%), Positives = 28/111 (25%)
Frame = +3
Query: 243 GGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPCMXXGXGGXLGGXXWGXXFXXXXGX 422
GGG G GCG G C GG GG G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGC 171
Query: 423 GXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGGXXGWGXGXXXXG 575
G S G P GG G P GG G G G
Sbjct: 172 GGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAV-APSGGGGCGGGGSSGGG 221
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/117 (29%), Positives = 36/117 (30%), Gaps = 2/117 (1%)
Frame = +3
Query: 240 SGGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPC--MXXGXGGXLGGXXWGXXFXXX 413
+GGG CG GCG G +PC G GG GG
Sbjct: 25 AGGGGGGGGCGGGCG------GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Query: 414 XGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGGXXGWGXGXXXXGXXG 584
G G G G G GG G G G G GG G G G G G
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 31.5 bits (68), Expect = 0.93
Identities = 32/114 (28%), Positives = 32/114 (28%), Gaps = 3/114 (2%)
Frame = +3
Query: 243 GGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPCMXXGXGGXLGGXXWGXXFXXXXGX 422
GGG CG G G G G C G GG GG G G
Sbjct: 91 GGG--GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGC--GGGGGGCGGGGGGGCGGGSSGG 146
Query: 423 GXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXX---GPPGGXXGWGXGXXXXG 575
GS G G GG G G G P GG G G G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 200
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/111 (25%), Positives = 28/111 (25%)
Frame = +3
Query: 243 GGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPCMXXGXGGXLGGXXWGXXFXXXXGX 422
GGG G GCG G C GG GG G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGC 171
Query: 423 GXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGGXXGWGXGXXXXG 575
G S G P GG G P GG G G G
Sbjct: 172 GGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAV-APSGGGGCGGGGSSGGG 221
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/94 (31%), Positives = 32/94 (34%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG P P G P P P P P KP + P
Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPGT--PGTPGKPPVA-PCEPTTPPPC-----KPCPQGPP 150
Query: 373 XPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPR 272
PP P G P TP R G+P PR
Sbjct: 151 GPPGPPGAPGDPGEAGTPG-RPGTDAAPGSPGPR 183
Score = 31.9 bits (69), Expect = 0.70
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P G P G P P A G P P P P
Sbjct: 177 PGSPGPRGP-PGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP-PGAPG 234
Query: 403 NXKPQXKP-PKXPPXPXXIQGXPXNXATP 320
N P P PK P P G P
Sbjct: 235 NDGPPGPPGPKGAPGPDGPPGADGQSGPP 263
Score = 29.5 bits (63), Expect = 3.7
Identities = 32/139 (23%), Positives = 34/139 (24%)
Frame = -2
Query: 754 PXGXXGGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXX 575
P G G PPG A P G G G P
Sbjct: 146 PQGPPG--PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGT 203
Query: 574 PXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXK 395
P P PG P PG + P PP G P P P +
Sbjct: 204 PAISEPLT-----PGAPGEPGDSGPPG-----PPGPPGAPGNDGPPGPPGPKGAPGPDGP 253
Query: 394 PQXKPPKXPPXPXXIQGXP 338
P PP P G P
Sbjct: 254 PGADGQSGPPGPPGPAGTP 272
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -3
Query: 585 PPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPXRXGP 454
PP P P PPGAP PG P GP
Sbjct: 139 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGP 182
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/94 (31%), Positives = 32/94 (34%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG P P G P P P P P KP + P
Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPGT--PGTPGKPPVA-PCEPTTPPPC-----KPCPQGPP 150
Query: 373 XPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPR 272
PP P G P TP R G+P PR
Sbjct: 151 GPPGPPGAPGDPGEAGTPG-RPGTDAAPGSPGPR 183
Score = 31.9 bits (69), Expect = 0.70
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P G P G P P A G P P P P
Sbjct: 177 PGSPGPRGP-PGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP-PGAPG 234
Query: 403 NXKPQXKP-PKXPPXPXXIQGXPXNXATP 320
N P P PK P P G P
Sbjct: 235 NDGPPGPPGPKGAPGPDGPPGADGQSGPP 263
Score = 29.5 bits (63), Expect = 3.7
Identities = 32/139 (23%), Positives = 34/139 (24%)
Frame = -2
Query: 754 PXGXXGGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXX 575
P G G PPG A P G G G P
Sbjct: 146 PQGPPG--PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGT 203
Query: 574 PXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXK 395
P P PG P PG + P PP G P P P +
Sbjct: 204 PAISEPLT-----PGAPGEPGDSGPPG-----PPGPPGAPGNDGPPGPPGPKGAPGPDGP 253
Query: 394 PQXKPPKXPPXPXXIQGXP 338
P PP P G P
Sbjct: 254 PGADGQSGPPGPPGPAGTP 272
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -3
Query: 585 PPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPXRXGP 454
PP P P PPGAP PG P GP
Sbjct: 139 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGP 182
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/105 (27%), Positives = 34/105 (32%), Gaps = 1/105 (0%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGX-TPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPP 377
P P P G P G +P P PP +P P P P P+ P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 376 KXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTPPP 242
PP P +G P + P Q P P S PPP
Sbjct: 298 PPPPPP---RGSPPTGSLP-------PPQAGGSPPPAGTGSPPPP 332
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/106 (24%), Positives = 31/106 (29%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P PP G G P P PPA G P P
Sbjct: 289 PPPPRAGSPPPPP--PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT 346
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQ 266
P PP P P G ++ +G P+ P+
Sbjct: 347 GSPPTGSPPTGRP-PRGGPGKSSEESSESREGPRGGPRGGPRGGPR 391
Score = 34.7 bits (76), Expect = 0.099
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXX 446
PA P P P P P P G P P PP A G P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 445 XPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXAT 323
P P P P+ PP P G P T
Sbjct: 293 RAGSPPPPPP-------PRGSPPTGSLPPPQAGGSPPPAGT 326
Score = 33.9 bits (74), Expect = 0.17
Identities = 32/136 (23%), Positives = 36/136 (26%), Gaps = 3/136 (2%)
Frame = -1
Query: 740 RGGPPGXXXGPXXXGXXXXP*XXGRXXXXXXGXGPXXXPSXGAXXRXPAXXXPPXXXXXX 561
R PP P P G P G+ P PP
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 560 XXPPPXXXPRGPPXPRXXXXPXXXXXXXPRRXGXGPP--XXXPXXXPPXXXXXPKXXTPX 387
PPP PP P P P+ G PP P P P+ P
Sbjct: 289 --PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT 346
Query: 386 XTPQT-XPXTRXHTRG 342
+P T P T RG
Sbjct: 347 GSPPTGSPPTGRPPRG 362
Score = 32.3 bits (70), Expect = 0.53
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = -1
Query: 671 GRXXXXXXGXGPXXXPSXGAXXRXPAXXXPPXXXXXXXXPPPXXXPRGPPXPRXXXXPXX 492
G+ G P P G+ + PP PP P PP P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPA 285
Query: 491 XXXXXPRRXGXGPPXXXPXXXPPXXXXXP 405
P R G PP P PP P
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/107 (22%), Positives = 24/107 (22%), Gaps = 2/107 (1%)
Frame = -2
Query: 673 RGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPX 494
RG G P G P P P P P P P P
Sbjct: 226 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 285
Query: 493 XXXXXPPAAXGXAPXXXP--XXPXXPXPXXXXNXKPQXKPPKXPPXP 359
PP A P P P P P PP P
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/105 (27%), Positives = 34/105 (32%), Gaps = 1/105 (0%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGX-TPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPP 377
P P P G P G +P P PP +P P P P P+ P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 376 KXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTPPP 242
PP P +G P + P Q P P S PPP
Sbjct: 319 PPPPPP---RGSPPTGSLP-------PPQAGGSPPPAGTGSPPPP 353
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/106 (24%), Positives = 31/106 (29%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P PP G G P P PPA G P P
Sbjct: 310 PPPPRAGSPPPPP--PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT 367
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQ 266
P PP P P G ++ +G P+ P+
Sbjct: 368 GSPPTGSPPTGRP-PRGGPGKSSEESSESREGPRGGPRGGPRGGPR 412
Score = 34.7 bits (76), Expect = 0.099
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXX 446
PA P P P P P P G P P PP A G P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 445 XPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXAT 323
P P P P+ PP P G P T
Sbjct: 314 RAGSPPPPPP-------PRGSPPTGSLPPPQAGGSPPPAGT 347
Score = 33.9 bits (74), Expect = 0.17
Identities = 32/136 (23%), Positives = 36/136 (26%), Gaps = 3/136 (2%)
Frame = -1
Query: 740 RGGPPGXXXGPXXXGXXXXP*XXGRXXXXXXGXGPXXXPSXGAXXRXPAXXXPPXXXXXX 561
R PP P P G P G+ P PP
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 560 XXPPPXXXPRGPPXPRXXXXPXXXXXXXPRRXGXGPP--XXXPXXXPPXXXXXPKXXTPX 387
PPP PP P P P+ G PP P P P+ P
Sbjct: 310 --PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT 367
Query: 386 XTPQT-XPXTRXHTRG 342
+P T P T RG
Sbjct: 368 GSPPTGSPPTGRPPRG 383
Score = 32.3 bits (70), Expect = 0.53
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = -1
Query: 671 GRXXXXXXGXGPXXXPSXGAXXRXPAXXXPPXXXXXXXXPPPXXXPRGPPXPRXXXXPXX 492
G+ G P P G+ + PP PP P PP P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPA 306
Query: 491 XXXXXPRRXGXGPPXXXPXXXPPXXXXXP 405
P R G PP P PP P
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/107 (22%), Positives = 24/107 (22%), Gaps = 2/107 (1%)
Frame = -2
Query: 673 RGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPX 494
RG G P G P P P P P P P P
Sbjct: 247 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 306
Query: 493 XXXXXPPAAXGXAPXXXP--XXPXXPXPXXXXNXKPQXKPPKXPPXP 359
PP A P P P P P PP P
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/105 (27%), Positives = 34/105 (32%), Gaps = 1/105 (0%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGX-TPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPP 377
P P P G P G +P P PP +P P P P P+ P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 376 KXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTPPP 242
PP P +G P + P Q P P S PPP
Sbjct: 304 PPPPPP---RGSPPTGSLP-------PPQAGGSPPPAGTGSPPPP 338
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/106 (24%), Positives = 31/106 (29%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P PP G G P P PPA G P P
Sbjct: 295 PPPPRAGSPPPPP--PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT 352
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQ 266
P PP P P G ++ +G P+ P+
Sbjct: 353 GSPPTGSPPTGRP-PRGGPGKSSEESSESREGPRGGPRGGPRGGPR 397
Score = 34.7 bits (76), Expect = 0.099
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXX 446
PA P P P P P P G P P PP A G P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 445 XPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXAT 323
P P P P+ PP P G P T
Sbjct: 299 RAGSPPPPPP-------PRGSPPTGSLPPPQAGGSPPPAGT 332
Score = 33.9 bits (74), Expect = 0.17
Identities = 32/136 (23%), Positives = 36/136 (26%), Gaps = 3/136 (2%)
Frame = -1
Query: 740 RGGPPGXXXGPXXXGXXXXP*XXGRXXXXXXGXGPXXXPSXGAXXRXPAXXXPPXXXXXX 561
R PP P P G P G+ P PP
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 560 XXPPPXXXPRGPPXPRXXXXPXXXXXXXPRRXGXGPP--XXXPXXXPPXXXXXPKXXTPX 387
PPP PP P P P+ G PP P P P+ P
Sbjct: 295 --PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT 352
Query: 386 XTPQT-XPXTRXHTRG 342
+P T P T RG
Sbjct: 353 GSPPTGSPPTGRPPRG 368
Score = 32.3 bits (70), Expect = 0.53
Identities = 22/89 (24%), Positives = 25/89 (28%)
Frame = -1
Query: 671 GRXXXXXXGXGPXXXPSXGAXXRXPAXXXPPXXXXXXXXPPPXXXPRGPPXPRXXXXPXX 492
G+ G P P G+ + PP PP P PP P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPA 291
Query: 491 XXXXXPRRXGXGPPXXXPXXXPPXXXXXP 405
P R G PP P PP P
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/107 (22%), Positives = 24/107 (22%), Gaps = 2/107 (1%)
Frame = -2
Query: 673 RGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPX 494
RG G P G P P P P P P P P
Sbjct: 232 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 291
Query: 493 XXXXXPPAAXGXAPXXXP--XXPXXPXPXXXXNXKPQXKPPKXPPXP 359
PP A P P P P P PP P
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXP--XXPXXPXPXXXXNXKPQXKPPK 374
P PPG P G P P PP G P P P P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 373 XPPXPXXIQGXPXNXATP 320
PP P +G P P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 574 PXXXXPXPHPXXPPGG-PXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNX 398
P P P P PPGG P G P P PP + G P P P P
Sbjct: 721 PITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 397 KPQXKPPKXPP 365
+ PP PP
Sbjct: 779 GFKGGPPPPPP 789
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/95 (26%), Positives = 25/95 (26%), Gaps = 5/95 (5%)
Frame = -2
Query: 634 GQXPAXGPXXXXRXXXXPXXPXXXXPX---PHPXXPPGG--PXXPGXTPXPXXXXXXPPA 470
G P G P P P P P PPGG P G P P PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 469 AXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPP 365
P P P P P PP
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/89 (24%), Positives = 23/89 (25%)
Frame = -1
Query: 641 GPXXXPSXGAXXRXPAXXXPPXXXXXXXXPPPXXXPRGPPXPRXXXXPXXXXXXXPRRXG 462
GP P G P PP PP P PP P P G
Sbjct: 725 GPPPPPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 461 XGPPXXXPXXXPPXXXXXPKXXTPXXTPQ 375
PP P P P P P+
Sbjct: 783 GPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = -2
Query: 538 PP--GGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPP 365
PP GGP P P P PP G P P P P PP PP
Sbjct: 707 PPITGGPPPPPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXP--XXPXXPXPXXXXNXKPQXKPPK 374
P PPG P G P P PP G P P P P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 373 XPPXPXXIQGXPXNXATP 320
PP P +G P P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 574 PXXXXPXPHPXXPPGG-PXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNX 398
P P P P PPGG P G P P PP + G P P P P
Sbjct: 721 PITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 397 KPQXKPPKXPP 365
+ PP PP
Sbjct: 779 GFKGGPPPPPP 789
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/95 (26%), Positives = 25/95 (26%), Gaps = 5/95 (5%)
Frame = -2
Query: 634 GQXPAXGPXXXXRXXXXPXXPXXXXPX---PHPXXPPGG--PXXPGXTPXPXXXXXXPPA 470
G P G P P P P P PPGG P G P P PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 469 AXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPP 365
P P P P P PP
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/89 (24%), Positives = 23/89 (25%)
Frame = -1
Query: 641 GPXXXPSXGAXXRXPAXXXPPXXXXXXXXPPPXXXPRGPPXPRXXXXPXXXXXXXPRRXG 462
GP P G P PP PP P PP P P G
Sbjct: 725 GPPPPPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 461 XGPPXXXPXXXPPXXXXXPKXXTPXXTPQ 375
PP P P P P P+
Sbjct: 783 GPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = -2
Query: 538 PP--GGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPP 365
PP GGP P P P PP G P P P P PP PP
Sbjct: 707 PPITGGPPPPPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXP--XXPXXPXPXXXXNXKPQXKPPK 374
P PPG P G P P PP G P P P P PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 373 XPPXPXXIQGXPXNXATP 320
PP P +G P P
Sbjct: 356 PPPPPGGFKGGPPPPPPP 373
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 574 PXXXXPXPHPXXPPGG-PXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNX 398
P P P P PPGG P G P P PP + G P P P P
Sbjct: 304 PITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Query: 397 KPQXKPPKXPP 365
+ PP PP
Sbjct: 362 GFKGGPPPPPP 372
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/95 (26%), Positives = 25/95 (26%), Gaps = 5/95 (5%)
Frame = -2
Query: 634 GQXPAXGPXXXXRXXXXPXXPXXXXPX---PHPXXPPGG--PXXPGXTPXPXXXXXXPPA 470
G P G P P P P P PPGG P G P P PP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 469 AXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPP 365
P P P P P PP
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/89 (24%), Positives = 23/89 (25%)
Frame = -1
Query: 641 GPXXXPSXGAXXRXPAXXXPPXXXXXXXXPPPXXXPRGPPXPRXXXXPXXXXXXXPRRXG 462
GP P G P PP PP P PP P P G
Sbjct: 308 GPPPPPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Query: 461 XGPPXXXPXXXPPXXXXXPKXXTPXXTPQ 375
PP P P P P P+
Sbjct: 366 GPPPPPPPGMFAPMAPVIPDYLPPKKVPK 394
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = -2
Query: 538 PP--GGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPP 365
PP GGP P P P PP G P P P P PP PP
Sbjct: 290 PPITGGPPPPPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 38.7 bits (86), Expect = 0.006
Identities = 33/118 (27%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXP--PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXX 410
P P P P P P G G P P PP+ P P P
Sbjct: 349 PFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPG 408
Query: 409 XXNXKPQXKPPK-XPPXPXXIQGXPXNXATP-XYRXXAXXXQGNPQPRPQFXDSTPPP 242
N P PP PP P G P + P + G P P P F S PP
Sbjct: 409 PFN--PSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP-PGP-FNPSGAPP 462
Score = 38.7 bits (86), Expect = 0.006
Identities = 33/118 (27%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXP--PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXX 410
P P P P P P G G P P PP+ P P P
Sbjct: 409 PFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPG 468
Query: 409 XXNXKPQXKPPK-XPPXPXXIQGXPXNXATP-XYRXXAXXXQGNPQPRPQFXDSTPPP 242
N P PP PP P G P + P + G P P P F S PP
Sbjct: 469 PFN--PSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP-PGP-FDPSGAPP 522
Score = 37.9 bits (84), Expect = 0.011
Identities = 31/106 (29%), Positives = 34/106 (32%), Gaps = 2/106 (1%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P G P P PP+ P P P N P PP
Sbjct: 182 PGPFGPSGAPPS-GGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFN--PSGAPPS 238
Query: 373 -XPPXPXXIQGXPXNXATP-XYRXXAXXXQGNPQPRPQFXDSTPPP 242
PP P G P + P + G P P P F S PP
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP-PGP-FDPSGAPP 282
Score = 37.9 bits (84), Expect = 0.011
Identities = 33/118 (27%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXP--PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXX 410
P P P P P P G G P P PP+ P P P
Sbjct: 289 PFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 348
Query: 409 XXNXKPQXKPPK-XPPXPXXIQGXPXNXATP-XYRXXAXXXQGNPQPRPQFXDSTPPP 242
N P PP PP P G P + P + G P P P F S PP
Sbjct: 349 PFN--PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP-PGP-FDPSGAPP 402
Score = 35.9 bits (79), Expect = 0.043
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = -2
Query: 574 PXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXK 395
P P P P P GP P P P PP G P P P +
Sbjct: 57 PSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRL--PR 114
Query: 394 PQXKPPKXPPXP 359
P P P P
Sbjct: 115 PSRSPHSDAPEP 126
Score = 33.5 bits (73), Expect = 0.23
Identities = 31/118 (26%), Positives = 35/118 (29%), Gaps = 4/118 (3%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXP--PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXX 410
P P P P P P G G P P PP+ P P P
Sbjct: 229 PFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 288
Query: 409 XXNXKPQXKPPK-XPPXPXXIQGXPXNXATP-XYRXXAXXXQGNPQPRPQFXDSTPPP 242
+ P PP PP P G + P + G P P P F S PP
Sbjct: 289 PFD--PSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGP-PGP-FDPSGAPP 342
Score = 32.7 bits (71), Expect = 0.40
Identities = 31/118 (26%), Positives = 35/118 (29%), Gaps = 4/118 (3%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXX--PPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXX 410
P P P P P G G P P PP+ P P P
Sbjct: 154 PFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTG 213
Query: 409 XXNXKPQXKPPK-XPPXPXXIQGXPXNXATP-XYRXXAXXXQGNPQPRPQFXDSTPPP 242
+ P PP PP P G P + P + G P P P F S PP
Sbjct: 214 PFD--PSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGP-FNPSGAPP 267
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXP-PAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKP- 380
P P PP P G P P P P+ P P P P +P P
Sbjct: 55 PDPSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPR 114
Query: 379 PKXPP 365
P P
Sbjct: 115 PSRSP 119
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 38.3 bits (85), Expect = 0.008
Identities = 30/94 (31%), Positives = 31/94 (32%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG P P G P P P P P KP + P
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQ--PGVPGKPPTA-PCEPTTPPPC-----KPCPQGPP 157
Query: 373 XPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPR 272
PP P G P TP R G P PR
Sbjct: 158 GPPGPPGAPGDPGEAGTPG-RPGTDATPGLPGPR 190
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -3
Query: 585 PPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPXRXGP 454
PP P P PPGAP PG P GP
Sbjct: 146 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGP 189
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 38.3 bits (85), Expect = 0.008
Identities = 30/94 (31%), Positives = 31/94 (32%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG P P G P P P P P KP + P
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQ--PGVPGKPPTA-PCEPTTPPPC-----KPCPQGPP 157
Query: 373 XPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPR 272
PP P G P TP R G P PR
Sbjct: 158 GPPGPPGAPGDPGEAGTPG-RPGTDATPGLPGPR 190
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -3
Query: 585 PPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPXRXGP 454
PP P P PPGAP PG P GP
Sbjct: 146 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGP 189
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 37.9 bits (84), Expect = 0.011
Identities = 34/119 (28%), Positives = 34/119 (28%), Gaps = 5/119 (4%)
Frame = +3
Query: 243 GGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPCMXXGXGGXLGGXXWGXXFXXXXGX 422
GGG CG GCG G P GG GG G G
Sbjct: 24 GGGGGGGGCGGGCG---GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG----GGG 76
Query: 423 GXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPP-----GGXXGWGXGXXXXGXXG 584
G G G G GG G G G PP GG G G G G G
Sbjct: 77 GGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGG 135
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP-----XXXPXXPXXPXPXXXXNXK 395
P P P PG P PG P P PP G P P P P +
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 394 PQXKPPKXPPXP 359
P PP P P
Sbjct: 360 PGMYPPPPPSRP 371
Score = 36.7 bits (81), Expect = 0.025
Identities = 31/129 (24%), Positives = 32/129 (24%), Gaps = 6/129 (4%)
Frame = -2
Query: 733 APPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPXXXXPX 554
A PG A A G + GQ P P P P
Sbjct: 225 AMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMT 284
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP------XXXPXXPXXPXPXXXXNXKP 392
P P PP P P P PP G P P P P P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 344
Query: 391 QXKPPKXPP 365
PP PP
Sbjct: 345 GGMPPPPPP 353
Score = 35.5 bits (78), Expect = 0.057
Identities = 28/113 (24%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXP-PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXX 407
P P P P P P PG P P PP G P P P P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPPPP 322
Query: 406 XNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTP 248
P PP P ++ P R + P P P + P
Sbjct: 323 SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 34.3 bits (75), Expect = 0.13
Identities = 29/114 (25%), Positives = 32/114 (28%), Gaps = 6/114 (5%)
Frame = -2
Query: 538 PPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXP-XXPXXPXPXXXXNXKPQXKPPKXPPX 362
PP P P TP P P P P P P P P PP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 361 PXXIQGXPXNXATPXYRXXAXXXQGN--PQPRPQFXDSTP---PPDXXSXNXXP 215
P G P P G P P P++ + P PP S P
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP-----XXXPXXPXXPXPXXXXNXK 395
P P P PG P PG P P PP G P P P P +
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 394 PQXKPPKXPPXP 359
P PP P P
Sbjct: 370 PGMYPPPPPSRP 381
Score = 36.7 bits (81), Expect = 0.025
Identities = 31/129 (24%), Positives = 32/129 (24%), Gaps = 6/129 (4%)
Frame = -2
Query: 733 APPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPXXXXPX 554
A PG A A G + GQ P P P P
Sbjct: 235 AMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMT 294
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP------XXXPXXPXXPXPXXXXNXKP 392
P P PP P P P PP G P P P P P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 354
Query: 391 QXKPPKXPP 365
PP PP
Sbjct: 355 GGMPPPPPP 363
Score = 35.5 bits (78), Expect = 0.057
Identities = 28/113 (24%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXP-PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXX 407
P P P P P P PG P P PP G P P P P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPPPP 332
Query: 406 XNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTP 248
P PP P ++ P R + P P P + P
Sbjct: 333 SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 34.3 bits (75), Expect = 0.13
Identities = 29/114 (25%), Positives = 32/114 (28%), Gaps = 6/114 (5%)
Frame = -2
Query: 538 PPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXP-XXPXXPXPXXXXNXKPQXKPPKXPPX 362
PP P P TP P P P P P P P P PP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 361 PXXIQGXPXNXATPXYRXXAXXXQGN--PQPRPQFXDSTP---PPDXXSXNXXP 215
P G P P G P P P++ + P PP S P
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 37.5 bits (83), Expect = 0.014
Identities = 30/108 (27%), Positives = 34/108 (31%), Gaps = 2/108 (1%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKP 380
P P P PP P TP P PP AP P P P + P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVP--PPPPPPPTMSKAPTGVPLPVPPPPPLFSPS---MILP 1390
Query: 379 PKXPPXPXXIQGXPXNXATPXYRXXA--XXXQGNPQPRPQFXDSTPPP 242
P PP P + P A + + P P Q S PPP
Sbjct: 1391 PPPPPLPSEEKKNPLPTANNGHTDNGSDDIDRNVPTPPSQNQYSMPPP 1438
Score = 29.9 bits (64), Expect = 2.8
Identities = 32/113 (28%), Positives = 32/113 (28%), Gaps = 7/113 (6%)
Frame = -1
Query: 740 RGGPPGXXXGPXXXG-XXXXP*XXG---RXXXXXXGXGPXXXPSXGAXXRXPAXXXPPXX 573
RGGPP GP G P G R G GP PS P PP
Sbjct: 1499 RGGPPMFRGGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQ-YYHDSPQNRGPPMG 1557
Query: 572 XXXXXXPPPXXXPRGPPXPR---XXXXPXXXXXXXPRRXGXGPPXXXPXXXPP 423
GPP PR P P R G PP P P
Sbjct: 1558 GLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGP 1610
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 36.7 bits (81), Expect = 0.025
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGG 539
G GG GG G G G G G GG G G GPPG
Sbjct: 92 GGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGS 151
Query: 540 XXGWGXGXXXXGXXGXXXXRXXXXGPXAG 626
G G G G R G AG
Sbjct: 152 NGGGDWGGNGGGGRGGGGGRGGGGGGGAG 180
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 36.7 bits (81), Expect = 0.025
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +3
Query: 339 GSPCMXXGXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPG 518
G + G GG +GG G + G G G+ G G GG PG
Sbjct: 85 GGAAVGGGYGGAVGGGG-GGGYGGGHGGGHGGAVGGGYGGGGGGGGGCQCSPSSNTCPPG 143
Query: 519 XXGPPG 536
GPPG
Sbjct: 144 PRGPPG 149
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 36.3 bits (80), Expect = 0.033
Identities = 30/119 (25%), Positives = 31/119 (26%), Gaps = 5/119 (4%)
Frame = -2
Query: 583 PXXPXXXXPXPH-----PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPX 419
P P P H P P PG P PP G P P P
Sbjct: 669 PHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPP 728
Query: 418 PXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTPPP 242
P P P PP P QG P + A P P PPP
Sbjct: 729 PQ---GIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPP 784
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 35.5 bits (78), Expect = 0.057
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 2/92 (2%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP--XXXPXXPXXPXPXX 410
P P P PGGP PG TP P P P P P
Sbjct: 170 PPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPG 229
Query: 409 XXNXKPQXKPPKXPPXPXXIQGXPXNXATPXY 314
P + P PP P G N Y
Sbjct: 230 AVTEVPGQQGPPGPPGPAGPPGPAGNAGQAGY 261
Score = 29.5 bits (63), Expect = 3.7
Identities = 30/137 (21%), Positives = 32/137 (23%), Gaps = 2/137 (1%)
Frame = +3
Query: 243 GGGVESXNCGRGCGLPWXXXAXXRXXGVAXFXGSPCMXXGXGGXLGGXXWGXXFXXXXGX 422
GGG +CG G P G G+P F G
Sbjct: 114 GGGGGCCSCGIGAAGPAGPPGADGNPGTDGAAGNPGQAGADASQDAPSASDFCFDCPPGP 173
Query: 423 GXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPG--GXXGWGXGXXXXGXXGXXXX 596
GA G PG GPPG G G G G G
Sbjct: 174 AGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTE 233
Query: 597 RXXXXGPXAGXXPXAXP 647
GP P P
Sbjct: 234 VPGQQGPPGPPGPAGPP 250
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 35.1 bits (77), Expect = 0.075
Identities = 33/128 (25%), Positives = 35/128 (27%), Gaps = 4/128 (3%)
Frame = -2
Query: 616 GPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXX----PPAAXGXAPX 449
GP P P P PP P P TP P PP G
Sbjct: 96 GPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEP-TTPPPCQPCPQGPPGPPGQPGIPGD 154
Query: 448 XXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRP 269
P P +P K P PP P G P +P A G P P
Sbjct: 155 NGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPA--VPGPPGPPG 212
Query: 268 QFXDSTPP 245
Q PP
Sbjct: 213 QAGQQGPP 220
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/104 (25%), Positives = 31/104 (29%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG P P G P P P P P P+
Sbjct: 92 PGPQGPQGTPGKPGKPGKPGAPGQ--PGTPGRPPQQ-PCEPTTPPPCQPC--------PQ 140
Query: 373 XPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTPPP 242
PP P G P + P + +P P+ P P
Sbjct: 141 GPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGP 184
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/90 (24%), Positives = 22/90 (24%), Gaps = 2/90 (2%)
Frame = -2
Query: 583 PXXPXXXXPX--PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXX 410
P P P P P G P PG PP G A P P
Sbjct: 170 PGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPGSNGID 229
Query: 409 XXNXKPQXKPPKXPPXPXXIQGXPXNXATP 320
P K P G P TP
Sbjct: 230 GAPGAPGAKGEPGTPGEPGKDGEPGKPGTP 259
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.099
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPP 377
P P PP P P P P PP AP P P P P P + P
Sbjct: 86 PAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENP 144
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 34.7 bits (76), Expect = 0.099
Identities = 22/82 (26%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPX----PXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQX 386
P PPG P PG P P PP G P P + KP
Sbjct: 176 PGEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGD 235
Query: 385 KPPKXPPXPXXIQGXPXNXATP 320
+ P+ PP G P P
Sbjct: 236 QGPRGPPGIPGAPGQPGRPGPP 257
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 34.7 bits (76), Expect = 0.099
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGG 539
G G GG WG G G G G G GG G G G G GG
Sbjct: 71 GWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG---GRGGGGGG 127
Query: 540 XXGWGXG 560
G G G
Sbjct: 128 RGGGGRG 134
Score = 32.7 bits (71), Expect = 0.40
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGG 539
G GG GG WG G G G GG G G G G GG
Sbjct: 56 GRGG--GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGG 113
Query: 540 XXGWGXGXXXXG 575
G G G G
Sbjct: 114 GGGGGGGRGGGG 125
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGG 539
G GG GG WG G G G GG G G G G GG
Sbjct: 63 GWGGGRGGG-WGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG--RGGGGGGGG 119
Query: 540 XXGWGXGXXXXGXXG 584
G G G G G
Sbjct: 120 GRGGGGGGRGGGGRG 134
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 34.7 bits (76), Expect = 0.099
Identities = 22/82 (26%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPX----PXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQX 386
P PPG P PG P P PP G P P + KP
Sbjct: 157 PGEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGD 216
Query: 385 KPPKXPPXPXXIQGXPXNXATP 320
+ P+ PP G P P
Sbjct: 217 QGPRGPPGIPGAPGQPGRPGPP 238
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 34.7 bits (76), Expect = 0.099
Identities = 22/89 (24%), Positives = 23/89 (25%), Gaps = 1/89 (1%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPG-GPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXX 407
P P P PH P P P PP G P P P
Sbjct: 508 PPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPP 567
Query: 406 XNXKPQXKPPKXPPXPXXIQGXPXNXATP 320
PP PP P + G P P
Sbjct: 568 LPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/100 (25%), Positives = 26/100 (26%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXX 446
PA GP R P P PP P G PP P
Sbjct: 514 PAPGPHKEQRRSTSKDPPRPAPPPVSSIPPP--PPIAGLLAANGTNVPIPPPPPPPLPQN 571
Query: 445 XPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXA 326
P P P PP PP P + G N A
Sbjct: 572 LSGAPPPPPPPPPM----LGGPPPPPPPPGGLMGPASNDA 607
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/88 (26%), Positives = 24/88 (27%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P PG P PG P P G P P
Sbjct: 180 PGEPGPKGP-PGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGA 238
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATP 320
+ P PK P P G N P
Sbjct: 239 DGSPGQPGPKGPNGPDGQPGADGNPGAP 266
Score = 33.9 bits (74), Expect = 0.17
Identities = 30/126 (23%), Positives = 34/126 (26%), Gaps = 2/126 (1%)
Frame = -2
Query: 616 GPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXG-XAPXXXP 440
GP P P +P PP P P P PP G P
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDS 165
Query: 439 XXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXA-XXXQGNPQPRPQF 263
P P + P PK PP P G P P + G P P +
Sbjct: 166 GEPGSPG-LPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEA 224
Query: 262 XDSTPP 245
PP
Sbjct: 225 GPQGPP 230
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/69 (24%), Positives = 19/69 (27%)
Frame = -3
Query: 657 GXXGGXPXXXXQXXGPXPXXGXXXPPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXX 478
G G P + P P P P P PG+P PG
Sbjct: 127 GNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPK 186
Query: 477 PPPXRXGPP 451
PP G P
Sbjct: 187 GPPGPPGAP 195
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/88 (26%), Positives = 24/88 (27%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P P PG P PG P P G P P
Sbjct: 180 PGEPGPKGP-PGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGA 238
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATP 320
+ P PK P P G N P
Sbjct: 239 DGSPGQPGPKGPNGPDGQPGADGNPGAP 266
Score = 33.9 bits (74), Expect = 0.17
Identities = 30/126 (23%), Positives = 34/126 (26%), Gaps = 2/126 (1%)
Frame = -2
Query: 616 GPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXG-XAPXXXP 440
GP P P +P PP P P P PP G P
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDS 165
Query: 439 XXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXA-XXXQGNPQPRPQF 263
P P + P PK PP P G P P + G P P +
Sbjct: 166 GEPGSPG-LPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEA 224
Query: 262 XDSTPP 245
PP
Sbjct: 225 GPQGPP 230
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/69 (24%), Positives = 19/69 (27%)
Frame = -3
Query: 657 GXXGGXPXXXXQXXGPXPXXGXXXPPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXX 478
G G P + P P P P P PG+P PG
Sbjct: 127 GNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPK 186
Query: 477 PPPXRXGPP 451
PP G P
Sbjct: 187 GPPGPPGAP 195
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +3
Query: 366 GGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGG-XXXXXXGXGVXPGXXGPPGGX 542
GG +GG +G G G G G G GG G G G G GG
Sbjct: 106 GGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGY 165
Query: 543 XGWGXGXXXXGXXG 584
G G G G G
Sbjct: 166 GGGGMGGGGYGGGG 179
Score = 33.1 bits (72), Expect = 0.30
Identities = 29/102 (28%), Positives = 32/102 (31%)
Frame = +3
Query: 321 GVAXFXGSPCMXXGXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXG 500
G+ G M GG GG +G G G G G G GG G
Sbjct: 139 GMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGG-GGDGGYGGGGFGGGGMGGYG 197
Query: 501 XGVXPGXXGPPGGXXGWGXGXXXXGXXGXXXXRXXXXGPXAG 626
G+ G G GG G G G G G GP G
Sbjct: 198 GGMGGGGYG-GGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGG 238
Score = 32.3 bits (70), Expect = 0.53
Identities = 24/92 (26%), Positives = 25/92 (27%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGG 539
G G GG G G G G G G GG G G G GG
Sbjct: 160 GDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGG 219
Query: 540 XXGWGXGXXXXGXXGXXXXRXXXXGPXAGXXP 635
G+G G G G G P
Sbjct: 220 DGGYGPSGGYGGGYGPGGGYGMGGGGGGGGCP 251
Score = 31.9 bits (69), Expect = 0.70
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 366 GGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGGXX 545
GG GG G G G G G G GG G G+ G G GG
Sbjct: 126 GGGYGGYGGGGYGGMGGGPGGYGMGGYGGGG---GGGGDFGGYGGGGMGGGGYGG-GGDG 181
Query: 546 GWGXGXXXXGXXG 584
G+G G G G
Sbjct: 182 GYGGGGFGGGGMG 194
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +3
Query: 378 GGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGGXX--GW 551
GG G F G G G G G GG G G G G PGG G+
Sbjct: 97 GGYGGGGDFGGGMGGGGYGGGGYGGGGD----GGGGYGGYGGGGYGGMGGGPGGYGMGGY 152
Query: 552 GXGXXXXGXXG 584
G G G G
Sbjct: 153 GGGGGGGGDFG 163
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGG 539
G G +GG G G G G G G GG G G G GG
Sbjct: 135 GGYGGMGGGPGGYGMGGYGGGG--GGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG 192
Query: 540 XXGWGXGXXXXGXXG 584
G+G G G G
Sbjct: 193 MGGYGGGMGGGGYGG 207
Score = 28.3 bits (60), Expect = 8.6
Identities = 25/75 (33%), Positives = 25/75 (33%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGG 539
G GG GG G F G G G G G GG G G G G GG
Sbjct: 78 GYGGSGGGAFGG--FNGGYGQGGYGGGGDFGGGM--GGGGYGGGGYGGGGDGG--GGYGG 131
Query: 540 XXGWGXGXXXXGXXG 584
G G G G G
Sbjct: 132 YGGGGYGGMGGGPGG 146
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P HP PP P P P PP A G P P
Sbjct: 118 PGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGP 177
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATP 320
N P P P G P + P
Sbjct: 178 NGGPGQPGQPGPHGPNGHPGKPGSQGPP 205
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 33.5 bits (73), Expect = 0.23
Identities = 32/120 (26%), Positives = 34/120 (28%), Gaps = 4/120 (3%)
Frame = -2
Query: 622 AXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP--- 452
A GP P P +P PP P P TP P P P
Sbjct: 96 AQGPPGTPGSAGRPGKPGAPGLNGNPGRPPKEPCEP-LTPPPCKPCPEGPPGPAGPPGPD 154
Query: 451 -XXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQP 275
P P P N +P K P PP P G P P G PQP
Sbjct: 155 GNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPG---GKPGPAGPP----GENGNNGEPQP 207
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = -2
Query: 535 PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPX 356
PG P PG P G P P P + P PK PP P
Sbjct: 198 PGAPGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPD 257
Query: 355 XIQGXPXNXATP 320
G N P
Sbjct: 258 GKPGADGNPGQP 269
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = -2
Query: 535 PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPX 356
PG P PG P G P P P + P PK PP P
Sbjct: 198 PGAPGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPD 257
Query: 355 XIQGXPXNXATP 320
G N P
Sbjct: 258 GKPGADGNPGQP 269
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 32.7 bits (71), Expect = 0.40
Identities = 27/102 (26%), Positives = 28/102 (27%)
Frame = +1
Query: 451 GGPXPXRRGXXXXXXXGXXXXRGXGGPRGXXXGGGXXXXXXXXGGXXXAGXRXXAPXLGX 630
GGP P + G G GGPRG GG GG G L
Sbjct: 153 GGPGP-KGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPS 211
Query: 631 XXGPXPXXXXXXRPXX*GXXXXPXXXGPXXXPGGPPRXXPXG 756
G P G P G PG P P G
Sbjct: 212 PPGEPGQPGEPGGPGEPGADGRPGHPGRAGPPGPPGDNGPNG 253
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 32.7 bits (71), Expect = 0.40
Identities = 29/138 (21%), Positives = 36/138 (26%), Gaps = 1/138 (0%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA-PX 449
P P + P P P P P P P P P P
Sbjct: 167 PKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPK 226
Query: 448 XXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRP 269
P P P KP+ KP P ++ P P + + NP+P P
Sbjct: 227 PKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEP--KPKPKLK---PKPKPNPKPEP 281
Query: 268 QFXDSTPPPDXXSXNXXP 215
P N P
Sbjct: 282 NPMPELKPKPKHKPNSRP 299
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/93 (24%), Positives = 25/93 (26%), Gaps = 4/93 (4%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA-PX 449
P P + P P P P P P P P P P
Sbjct: 213 PKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPK 272
Query: 448 XXPXXPXXPXPXXXXNXKPQXKP---PKXPPXP 359
P P P KP+ KP PK P P
Sbjct: 273 PKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRP 305
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.53
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXX----PPAAXGXAPXXXP--XXPXXPXPXXXXNX 398
P P+ PP P PG P P PP G P P P P P
Sbjct: 68 PVPNGFIPP--PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGV 125
Query: 397 KPQXKPPKXPPXP 359
PQ PK P P
Sbjct: 126 APQPPRPKTPVNP 138
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.53
Identities = 32/132 (24%), Positives = 36/132 (27%)
Frame = -2
Query: 640 AXGQXPAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXG 461
A PA P P P P PP P P P P
Sbjct: 64 APAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPA-PYPQHAVPAPAPPPAPYPQHAV 122
Query: 460 XAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNP 281
AP P P P P PP PP P + + P A P
Sbjct: 123 PAPAPYQQQPPPPPPPPHYPPPPPHYPP-PPPAP---HSAYIDHSAP---RPAYIEHSAP 175
Query: 280 QPRPQFXDSTPP 245
P+PQ+ PP
Sbjct: 176 PPQPQYPQQQPP 187
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -2
Query: 475 PAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATP 320
PAA P P P P P + +PQ P PP P Q P P
Sbjct: 19 PAATTPQPPPPPPPPK-PAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPP 69
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 31.9 bits (69), Expect = 0.70
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPP----GGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXP 416
P P P P P P GP T P P A P P P P
Sbjct: 586 PPSPPSPEPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASPLNPQPPPPPSP 645
Query: 415 XXXXNXKPQXKPPKXPP 365
+P+ KPP PP
Sbjct: 646 SP--EPEPEPKPPVTPP 660
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 4/104 (3%)
Frame = -2
Query: 739 GGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXG-PXXXXRXXXXPXXPXXX 563
GGA G P G + G+ A G P + P P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ 144
Query: 562 XPX-PHPXXPPG--GPXXPGXTPXPXXXXXXPPAAXGXAPXXXP 440
P P P PPG GP P P P P G P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXX--PXXPXPXXXXNXKPQXKP 380
P P P G P PG P G + P P P P P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP----GGPPGPAG 159
Query: 379 PKXPPXPXXIQGXPXNXATP 320
P PP P G P + A P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGP 179
Score = 28.7 bits (61), Expect = 6.5
Identities = 32/134 (23%), Positives = 35/134 (26%), Gaps = 4/134 (2%)
Frame = -2
Query: 748 GXXGGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPX 569
G PPG + P G +G + P P P
Sbjct: 100 GCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG 159
Query: 568 XXXPX--PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA-PXXXPXXPXXP-XPXXXXN 401
P P P PG P P P P PP G A P P P P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSG-PGP----AGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 400 XKPQXKPPKXPPXP 359
P P PP P
Sbjct: 215 GGPGEPGPAGPPGP 228
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 4/104 (3%)
Frame = -2
Query: 739 GGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXG-PXXXXRXXXXPXXPXXX 563
GGA G P G + G+ A G P + P P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ 144
Query: 562 XPX-PHPXXPPG--GPXXPGXTPXPXXXXXXPPAAXGXAPXXXP 440
P P P PPG GP P P P P G P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXX--PXXPXPXXXXNXKPQXKP 380
P P P G P PG P G + P P P P P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP----GGPPGPAG 159
Query: 379 PKXPPXPXXIQGXPXNXATP 320
P PP P G P + A P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGP 179
Score = 28.7 bits (61), Expect = 6.5
Identities = 32/134 (23%), Positives = 35/134 (26%), Gaps = 4/134 (2%)
Frame = -2
Query: 748 GXXGGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPX 569
G PPG + P G +G + P P P
Sbjct: 100 GCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG 159
Query: 568 XXXPX--PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA-PXXXPXXPXXP-XPXXXXN 401
P P P PG P P P P PP G A P P P P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSG-PGP----AGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 400 XKPQXKPPKXPPXP 359
P P PP P
Sbjct: 215 GGPGEPGPAGPPGP 228
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 4/104 (3%)
Frame = -2
Query: 739 GGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXG-PXXXXRXXXXPXXPXXX 563
GGA G P G + G+ A G P + P P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ 144
Query: 562 XPX-PHPXXPPG--GPXXPGXTPXPXXXXXXPPAAXGXAPXXXP 440
P P P PPG GP P P P P G P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXX--PXXPXPXXXXNXKPQXKP 380
P P P G P PG P G + P P P P P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP----GGPPGPAG 159
Query: 379 PKXPPXPXXIQGXPXNXATP 320
P PP P G P + A P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGP 179
Score = 28.7 bits (61), Expect = 6.5
Identities = 32/134 (23%), Positives = 35/134 (26%), Gaps = 4/134 (2%)
Frame = -2
Query: 748 GXXGGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPX 569
G PPG + P G +G + P P P
Sbjct: 100 GCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG 159
Query: 568 XXXPX--PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA-PXXXPXXPXXP-XPXXXXN 401
P P P PG P P P P PP G A P P P P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSG-PGP----AGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 400 XKPQXKPPKXPPXP 359
P P PP P
Sbjct: 215 GGPGEPGPAGPPGP 228
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 4/104 (3%)
Frame = -2
Query: 739 GGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXG-PXXXXRXXXXPXXPXXX 563
GGA G P G + G+ A G P + P P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ 144
Query: 562 XPX-PHPXXPPG--GPXXPGXTPXPXXXXXXPPAAXGXAPXXXP 440
P P P PPG GP P P P P G P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXX--PXXPXPXXXXNXKPQXKP 380
P P P G P PG P G + P P P P P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP----GGPPGPAG 159
Query: 379 PKXPPXPXXIQGXPXNXATP 320
P PP P G P + A P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGP 179
Score = 28.7 bits (61), Expect = 6.5
Identities = 32/134 (23%), Positives = 35/134 (26%), Gaps = 4/134 (2%)
Frame = -2
Query: 748 GXXGGAPPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXGPXXXXRXXXXPXXPX 569
G PPG + P G +G + P P P
Sbjct: 100 GCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG 159
Query: 568 XXXPX--PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA-PXXXPXXPXXP-XPXXXXN 401
P P P PG P P P P PP G A P P P P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSG-PGP----AGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 400 XKPQXKPPKXPPXP 359
P P PP P
Sbjct: 215 GGPGEPGPAGPPGP 228
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 31.5 bits (68), Expect = 0.93
Identities = 25/83 (30%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGP-XXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXX 407
P P PHP PPG P PG T P PP G P P P P
Sbjct: 77 PPPPHLLHALPHPAYPPGHPLHMPGMTMMP-MGPVGPPMMAG-----MPMRPMPPLPPMT 130
Query: 406 XNXKPQXKPPKXPPXPXXIQGXP 338
P P P + G P
Sbjct: 131 PMGS-MPHPNDGGPHPMMLPGAP 152
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXP 368
P PG P PG P A G A P P + +P PK P
Sbjct: 196 PNGNPGAPGSPGKPGEDGKSEPITPGAPGPAGPPGPQGPPGAPGQPGHDGQPGTPGPKGP 255
Query: 367 PXPXXIQGXPXNXATP 320
G N TP
Sbjct: 256 NGNPGAPGADGNPGTP 271
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -1
Query: 626 PSXGAXXRXPAXXXPPXXXXXXXX-PPPXXXPRGPPXPRXXXXPXXXXXXXPRRXGXGPP 450
P G P PP PPP PR P P P PRR PP
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP-------PRRPPMTPP 165
Query: 449 XXXPXXXPPXXXXXPKXXTPXXTP 378
P PP P+ P TP
Sbjct: 166 --SPQRRPPRTPPSPEPRNPPRTP 187
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P PP G +P P P +P P P P PQ +PP+
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP--PRRPPMTPP------SPQRRPPR 173
Query: 373 XPPXP 359
PP P
Sbjct: 174 TPPSP 178
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/93 (22%), Positives = 21/93 (22%)
Frame = -2
Query: 646 GXAXGQXPAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAA 467
G Q PA P P PP P P P PP
Sbjct: 104 GQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMT 163
Query: 466 XGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXP 368
P P P P P PP P
Sbjct: 164 PPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/125 (22%), Positives = 33/125 (26%), Gaps = 1/125 (0%)
Frame = -2
Query: 616 GPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGX-APXXXP 440
GP P P +P PP P P P PP G P
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDS 165
Query: 439 XXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFX 260
P P + P PK P P G P + + G P P +
Sbjct: 166 GEPGSPG-LPGQDAAPGEPGPKGPKGPPGAPGAPEHQESQECPRGEPLIPGEPGPPGEAG 224
Query: 259 DSTPP 245
PP
Sbjct: 225 PQGPP 229
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = -3
Query: 645 GXPXXXXQXXGPXPXXGXXXPPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPX 466
G P P P G PP AP + P G P PG PP
Sbjct: 172 GLPGQDAAPGEPGPK-GPKGPPGAPGAPEHQESQECPRGEPLIPGEPGPPGEAGPQGPPG 230
Query: 465 RXGPP 451
G P
Sbjct: 231 SPGQP 235
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/105 (26%), Positives = 31/105 (29%)
Frame = -2
Query: 634 GQXPAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA 455
G+ A G P P P P PG P PG P P G A
Sbjct: 204 GEPGAPGTPGGNALPGPPGPPGPQGP-PGADGLPGNPGAPG-VPGQVIEV---PGTPGPA 258
Query: 454 PXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATP 320
P P P P P+ PP I G P N +P
Sbjct: 259 GPPGPPGPIGP-PGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSP 302
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/76 (26%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = -2
Query: 583 PXXPXXXXPX--PHPXXPPGGPXXPGXT-PXPXXXXXXPPAAXGXAPXXXPXXPXXPXPX 413
P P P P P PPG P PG + P P P P P P
Sbjct: 252 PGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQP 311
Query: 412 XXXNXKPQXKPPKXPP 365
PP+ P
Sbjct: 312 GAGGGCDHCPPPRTAP 327
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/105 (23%), Positives = 27/105 (25%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P PPG P PG P P P P
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAG 199
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRP 269
+ PP P P G P + P A N P P
Sbjct: 200 QTRSAPSPPGQPGQP----GEPGSPGEPGPDGRAGHPGRNGPPGP 240
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/105 (23%), Positives = 27/105 (25%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P PPG P PG P P P P
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAG 199
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRP 269
+ PP P P G P + P A N P P
Sbjct: 200 QTRSAPSPPGQPGQP----GEPGSPGEPGPDGRAGHPGRNGPPGP 240
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = -2
Query: 574 PXXXXPXPHPXXPPG-GPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNX 398
P P P PP GP P P P PP G P P P P P
Sbjct: 214 PVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPG-PPGPPGP-PTRRPPGP--PGPPTRRPP 269
Query: 397 KPQXKPPKXPP 365
P P + PP
Sbjct: 270 GPPGPPTRRPP 280
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 564 PXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPXRXGPPXXXPXXXPXPXXXTP 406
P P+ PPG P PG PP GPP P P P P
Sbjct: 234 PSDEPSPSDPPGPPGPPGPPTRR-------PPGPPGPPTRRPPGPPGPPTRRP 279
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/96 (23%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKP-P 377
P P GP PG P P + P P P P P P
Sbjct: 166 PSEDPQPSGPPSPG--PVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKP 223
Query: 376 KXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRP 269
PP P + P + +P G P RP
Sbjct: 224 SEPPSPGPVD--PSDEPSPSDPPGPPGPPGPPTRRP 257
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/96 (22%), Positives = 27/96 (28%), Gaps = 7/96 (7%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXT-PXPXXXXXXPPA------A 467
P+ GP P P GP PG P PP+ +
Sbjct: 176 PSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPS 235
Query: 466 XGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXP 359
+P P P P P P P + PP P
Sbjct: 236 DEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGP 271
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/105 (25%), Positives = 27/105 (25%)
Frame = -2
Query: 634 GQXPAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA 455
G GP P P P P PG P G P P G A
Sbjct: 196 GAPGVPGPDGDAGSPPPPGPPGPPGP-PGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPA 254
Query: 454 PXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATP 320
P P P Q PP PP P G P P
Sbjct: 255 ---GPPGPPGPPGQDGSGGAAQPGPPG-PPGPPGNDGQPGGPGQP 295
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 538 PPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXP 359
PP P G P P PP G AP P P P PP PP
Sbjct: 490 PPPMPSINGHAPNPPP----PPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVG 545
Query: 358 XXIQGXPXNXATP 320
G P P
Sbjct: 546 MANGGPPPPPPLP 558
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/104 (27%), Positives = 29/104 (27%), Gaps = 6/104 (5%)
Frame = -2
Query: 616 GPXXXXRXXXXPXXPXXXXPXPHPXXP--PGGPXXPGXTPXPXXXXXXP----PAAXGXA 455
GP P P P P P P P G TP P PAA G A
Sbjct: 169 GPAGPDGEAGSPAAPSPPGP-PGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPA 227
Query: 454 PXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXAT 323
P P P P P PP P G N T
Sbjct: 228 GPPGPAGPPGP-DGASPTAAPGAAGPPGPPGPAGAPGPDGNPGT 270
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 2/89 (2%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAA-XGXAPXXXPXXPXXPXPXXX 407
P P P P P PPG PG P G P P P
Sbjct: 194 PSGPGPAGP-PGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQ 252
Query: 406 XNXKPQXKP-PKXPPXPXXIQGXPXNXAT 323
P PK PP P G N T
Sbjct: 253 SGSGSAGGPGPKGPPGPAGQPGSDGNPGT 281
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/72 (31%), Positives = 25/72 (34%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG TP P A+ A P P P P +P P
Sbjct: 119 PGPPGPGGRPGKPG-TPGKPGAPGNPGASGKGA--AAPCEPSTPPP-----CQPCPAGPP 170
Query: 373 XPPXPXXIQGXP 338
PP P G P
Sbjct: 171 GPPGPDGTPGEP 182
Score = 28.7 bits (61), Expect = 6.5
Identities = 33/131 (25%), Positives = 34/131 (25%), Gaps = 1/131 (0%)
Frame = +3
Query: 366 GGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXGXGVXPGXXGPPGGXX 545
GG GG +G G G G G G G G G PG G PG
Sbjct: 85 GGAGGGGGYGA------GGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPG 138
Query: 546 GWGXGXXXXGXXGXXXXRXXXXGPXAGXXPXAXP-RXXPXXXPLXLGXXXXAXXXXAXXX 722
G G P P P P P G A
Sbjct: 139 --APGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSG 196
Query: 723 PGGAPPXXPXG 755
PG A P P G
Sbjct: 197 PGPAGPPGPAG 207
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/87 (24%), Positives = 24/87 (27%)
Frame = -1
Query: 776 PGXGQXXPXGXXRGGPPGXXXGPXXXGXXXXP*XXGRXXXXXXGXGPXXXPSXGAXXRXP 597
P P G GPPG P G P G+ G P+ P
Sbjct: 187 PAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGP 246
Query: 596 AXXXPPXXXXXXXXPPPXXXPRGPPXP 516
A P P+GPP P
Sbjct: 247 AGPDGQSGSGSAGGP----GPKGPPGP 269
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/88 (25%), Positives = 24/88 (27%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P PG P PG P A G A P P
Sbjct: 180 PGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATP 320
+ +P PK P G N P
Sbjct: 239 DGQPGAPGPKGPNGNPGAPGADGNPGAP 266
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/88 (25%), Positives = 24/88 (27%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P PG P PG P A G A P P
Sbjct: 180 PGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATP 320
+ +P PK P G N P
Sbjct: 239 DGQPGAPGPKGPNGNPGAPGADGNPGAP 266
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXX 446
PA P + P P P P P P GP P TP P A P
Sbjct: 131 PAVIPPVVTQPIVPPPVPEVSEPVPEPPIPAPGPVAP-PTPSGPLFGGVEPGAGALTPGV 189
Query: 445 XP 440
P
Sbjct: 190 AP 191
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPK 374
P P P G P PG P P G P P P P P KP P
Sbjct: 107 PGPAGPAGAPGNPGRPGKPGAPGL--PGNPG-KPPVQPCEPITPPP-----CKPCPDGPA 158
Query: 373 XPPXPXXIQGXPXNXATP 320
PP P G P
Sbjct: 159 GPPGPPGAPGDAGTNGAP 176
Score = 29.1 bits (62), Expect = 4.9
Identities = 27/108 (25%), Positives = 31/108 (28%), Gaps = 3/108 (2%)
Frame = -2
Query: 634 GQXPAXG-PXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGX 458
G+ A G P + P P P P GP P P P A G
Sbjct: 123 GKPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGD 182
Query: 457 AP--XXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATP 320
AP P P P +P +P P I G P P
Sbjct: 183 APPGEAGPKGPPGPPGSPGAPGEP-GRPGDDAPSEPLIPGEPGPQGPP 229
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXP 368
P PPG P PG P P+ P P P P Q P P
Sbjct: 190 PKGPPGPPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGP--PGPPGQAGPDGQPGAPGGP 247
Query: 367 PXPXXIQGXPXNXATP 320
P +G P N P
Sbjct: 248 GTPGS-KGPPGNPGAP 262
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/88 (25%), Positives = 24/88 (27%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P PG P PG P A G A P P
Sbjct: 180 PGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATP 320
+ +P PK P G N P
Sbjct: 239 DGQPGAPGPKGPNGNPGAPGADGNPGAP 266
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/88 (25%), Positives = 24/88 (27%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXX 404
P P P P PG P PG P A G A P P
Sbjct: 180 PGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
Query: 403 NXKPQXKPPKXPPXPXXIQGXPXNXATP 320
+ +P PK P G N P
Sbjct: 239 DGQPGAPGPKGPNGNPGAPGADGNPGAP 266
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKP 380
P P P P P P T PPA AP P N PQ KP
Sbjct: 258 PTPVPNPVPSPPPPPANTTVTEEKTTVPPATDEPAP---KTVATTENPKPIDNSTPQ-KP 313
Query: 379 PKXPPXP 359
P PP P
Sbjct: 314 PN-PPVP 319
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 31/120 (25%), Positives = 32/120 (26%), Gaps = 4/120 (3%)
Frame = -2
Query: 622 AXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP--- 452
A GP P P +P PP P P TP P P P
Sbjct: 94 AQGPPGTPGRAGRPGKPGAPGLNGNPGRPPKEPCEP-ITPPPCKPCPEGPPGPAGPPGPQ 152
Query: 451 -XXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQP 275
P P P N K P PP P G P P G PQP
Sbjct: 153 GNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPG---GKPGPAGPP----GENGRNGEPQP 205
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/72 (23%), Positives = 19/72 (26%)
Frame = -2
Query: 535 PGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXPPXPX 356
P GP P P P A P P P P P P P P
Sbjct: 142 PPGPAGNAGNPGPKGPPGQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPG 201
Query: 355 XIQGXPXNXATP 320
++ P P
Sbjct: 202 QVRTVPAPPGNP 213
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 3/91 (3%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXP-XPXXX 407
P P P P PPG P PG P P A P P P
Sbjct: 142 PPGPAGNAGNPGPKGPPGQPGAPG-EQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAP 200
Query: 406 XNXKPQXKPPKXP--PXPXXIQGXPXNXATP 320
+ PP P P QG P P
Sbjct: 201 GQVRTVPAPPGNPGQPGEPGAQGPPGEDGRP 231
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -3
Query: 615 GPXPXXGXXXPPXXXXAPXXXPTXXXPPGAPXXPGXXXXXXXXXXXPPPXRXGP 454
GP G P AP T PPG P PG P GP
Sbjct: 183 GPPGTAGNDGTPGQPGAPGQVRTVPAPPGNPGQPGEPGAQGPPGEDGRPGNSGP 236
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 32/120 (26%), Positives = 34/120 (28%), Gaps = 5/120 (4%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXP---GXTPXPXXXXXXPPAAXGXAP--XXXPXXPXXPX 419
P P P PPGGP P G P PA P P P P
Sbjct: 161 PAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPG 220
Query: 418 PXXXXNXKPQXKPPKXPPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQFXDSTPPPD 239
P P P G P N P A G P R + D+ P PD
Sbjct: 221 PPGPRGEAGPAGQPGSPGNDGE-SGKPGNAGRPG-PPGAPGKNGTPGVRGE--DAAPGPD 276
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Frame = -2
Query: 553 PHPXXPPGGPXXP---GXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXK 383
P P PPG P P G T P P A AP P P P +
Sbjct: 174 PGPTGPPGEPGLPGAQGITGQP-GVNAEPVAYRAGAP-GPPGEPGPPGAHGDPGDLGEEG 231
Query: 382 PP--KXPPXPXXIQGXPXNXATPXYR 311
PP P P G P N P R
Sbjct: 232 PPGLPGPKGPPGASGIPGNDGPPGAR 257
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXP 416
P P P P P P P TP P PP A P P P
Sbjct: 341 PDAPKVEEPEPAPTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPAVPEEAQAPTP 396
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 613 APXLGXXXGPXPXXXXXXRPXX*GXXXXPXXXGPXXXPGGPPRXXPXGXXXPXPG 777
AP LG GP P G P GP PG P + G P PG
Sbjct: 144 APGLGGPPGPPGQDGIPGNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGP-PG 197
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.7
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 8/114 (7%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXA-PXXXPXXPXXPXPXXXXNXKPQ-X 386
P P PP P P P PP G A P P P P
Sbjct: 41 PPPCFDCPPPAPIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCF 100
Query: 385 KPPKXPPXPXXIQGXP--XNXATPXYRXXAXXXQGNP----QPRPQFXDSTPPP 242
P PP P + G P A P P P P F + PPP
Sbjct: 101 GPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPPPCFGPACPPP 154
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTPXP-XXXXXXPPAAXGXAPXXXPXXPXXPXPXXX 407
P P P P P P P P P P AA AP P P P P
Sbjct: 477 PAAPAEPAPAPAPAPAPAPEAAPAPEPAPAPAPAPAPEAAPAAAPDAAPAEP-APVPEVA 535
Query: 406 XNXKPQXKPPK 374
P P+
Sbjct: 536 PAPAPAPAAPE 546
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXP 368
P PP P P + P PP G AP P P P PP P
Sbjct: 198 PHAPP--PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
Query: 367 P 365
P
Sbjct: 256 P 256
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXP 431
P P P GGP P P P P+ G P P P
Sbjct: 177 PGPAGPAGGPG-PAGPPGPAGADGNTPSGGGEGPAGPPGPP 216
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 5/87 (5%)
Frame = -2
Query: 583 PXXPXXXXPXPHPXXPPGGPXXPGXTP-----XPXXXXXXPPAAXGXAPXXXPXXPXXPX 419
P P P P PPG G TP P P A P P P
Sbjct: 176 PPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPG 235
Query: 418 PXXXXNXKPQXKPPKXPPXPXXIQGXP 338
P PP P G P
Sbjct: 236 QVTETPGTPGPAGAAGPPGPPGPAGNP 262
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/96 (25%), Positives = 26/96 (27%), Gaps = 1/96 (1%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPP-KX 371
P P P P P P P A P P P N P PP
Sbjct: 40 PCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPPAPAPAYNPYPCATPPCPL 99
Query: 370 PPXPXXIQGXPXNXATPXYRXXAXXXQGNPQPRPQF 263
P P + P P Y A P P P +
Sbjct: 100 PYIPEPV--APVPAPAPVYEPYACAAPPCPPPTPVY 133
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXP 368
P PP P P + P PP G AP P P P PP P
Sbjct: 184 PHAPP--PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Query: 367 P 365
P
Sbjct: 242 P 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -2
Query: 547 PXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXPXPXXXXNXKPQXKPPKXP 368
P PP P P + P PP G AP P P P PP P
Sbjct: 184 PHAPP--PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Query: 367 P 365
P
Sbjct: 242 P 242
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 25.0 bits (52), Expect(2) = 6.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXP 497
P+P P G P PG P P
Sbjct: 197 PYPYPPQGMPGYPGGPPPP 215
Score = 22.2 bits (45), Expect(2) = 6.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 382 PPKXPPXPXXIQGXPXNXATPXY 314
P PP P +G P A P Y
Sbjct: 209 PGGPPPPPHGYEGYPPPGAQPGY 231
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +3
Query: 360 GXGGXLGGXXWGXXFXXXXGXGXXGSXGXXXGAXPXAAGGXXXXXXG-XGVXPGXXGPPG 536
G GG G WG G G G G GG G G G G G
Sbjct: 160 GRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQG 219
Query: 537 GXXGWGXG 560
G G G
Sbjct: 220 GSQGGSQG 227
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP--XXXPXXPXXPXPXXXXNXKPQXKP 380
P P P G P PP + G AP P P P P P
Sbjct: 591 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 650
Query: 379 PKXPPXPXXIQG 344
P PP P G
Sbjct: 651 PPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = -2
Query: 553 PHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP--XXXPXXPXXPXPXXXXNXKPQXKP 380
P P P G P PP + G AP P P P P P
Sbjct: 417 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 476
Query: 379 PKXPPXPXXIQG 344
P PP P G
Sbjct: 477 PPPPPPPSGAGG 488
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/92 (25%), Positives = 25/92 (27%), Gaps = 3/92 (3%)
Frame = -2
Query: 625 PAXGPXXXXRXXXXPXXPXXXXPXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAPXX 446
P P + P P P P P P P P P P
Sbjct: 206 PIPKPMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPK-PMPKP 264
Query: 445 XPXXPXXPXPXXXXNXKPQXKP---PKXPPXP 359
P P P KP+ KP PK P P
Sbjct: 265 KPKLKLKPKPMPFPKPKPKLKPKTKPKKNPVP 296
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 517 GXGGPRGXXXGGGXXXXXXXXGGXXXAGXRXXAPXLGXXXGPXP 648
G G PRG G G GG G + P G GP P
Sbjct: 160 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 203
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 517 GXGGPRGXXXGGGXXXXXXXXGGXXXAGXRXXAPXLGXXXGPXP 648
G G PRG G G GG G + P G GP P
Sbjct: 440 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 483
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.5
Identities = 27/107 (25%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Frame = -2
Query: 538 PPGGPXXPGXTPXPXXXXXXPPAAXGXAPXXXPXXPXXP-XPXXXXNXKPQ-----XKPP 377
PP P G P P +A G A P P P +PQ
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNAS 248
Query: 376 KXPPXPXXIQGXPXNXAT--PXYRXXAXXXQGNPQPRPQFXDSTPPP 242
+ PP P G P T P P P P+ + PPP
Sbjct: 249 RRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 295
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 7/87 (8%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP------XXXPXXPXXPXPXXXXNX 398
P P PG P P P P PP G P P P P
Sbjct: 116 PFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYM 175
Query: 397 KPQXKPPKXPPXPXXI-QGXPXNXATP 320
P P PP I G P P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 7/87 (8%)
Frame = -2
Query: 559 PXPHPXXPPGGPXXPGXTPXPXXXXXXPPAAXGXAP------XXXPXXPXXPXPXXXXNX 398
P P PG P P P P PP G P P P P
Sbjct: 116 PFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYM 175
Query: 397 KPQXKPPKXPPXPXXI-QGXPXNXATP 320
P P PP I G P P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.6
Identities = 29/115 (25%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Frame = -2
Query: 754 PXGXXGG-APPGXXXAXXXXAXXXXPXXRGXXXGXXRGXAXGQXPAXG-PXXXXRXXXXP 581
P G G P G A A P G A GQ A G P +
Sbjct: 138 PAGAPGAPGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAGAPGHPGAPGQGGQRS 197
Query: 580 XXPXXXXPXPHPXXPPGGPXXPGXT--PXPXXXXXXPPAAXGXAPXXXPXXPXXP 422
P P P GGP PG + P A G P P P
Sbjct: 198 RGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGNAGTPGTPGAP 252
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/86 (30%), Positives = 26/86 (30%)
Frame = +1
Query: 499 GXXXXRGXGGPRGXXXGGGXXXXXXXXGGXXXAGXRXXAPXLGXXXGPXPXXXXXXRPXX 678
G RG GP G GG G AG G GP P RP
Sbjct: 148 GPRGPRGDAGPPGPPGNGGRPGQRGTPG---EAGTPGPVGEPGETGGPGPQG----RP-- 198
Query: 679 *GXXXXPXXXGPXXXPGGPPRXXPXG 756
G P G PG P R P G
Sbjct: 199 -GQRGEPGQPGTVHTPGNPGRPGPQG 223
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/88 (26%), Positives = 23/88 (26%), Gaps = 2/88 (2%)
Frame = -1
Query: 773 GXGQXXPXGXXRGGPPGXXXGPXXXGXXXXP*XXGRXXXXXXG-XGPXXXPSXGAXXRXP 597
G G P GPPG P G P G G GP P
Sbjct: 194 GAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAGGTTSTNQPGPPGPAGPPGPAGPAGED 253
Query: 596 AXXXP-PXXXXXXXXPPPXXXPRGPPXP 516
A P P PP GP P
Sbjct: 254 AYAQPSPAGTPGPPGPPGKDGEAGPDGP 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,141,290
Number of Sequences: 27780
Number of extensions: 185737
Number of successful extensions: 2568
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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