Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_F07
(862 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 227 3e-58
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 214 2e-54
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 188 1e-46
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 186 8e-46
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 184 3e-45
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 181 2e-44
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 180 6e-44
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 178 1e-43
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 174 3e-42
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 170 4e-41
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 169 8e-41
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 168 1e-40
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 167 2e-40
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 164 2e-39
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 162 1e-38
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 152 1e-35
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 151 3e-35
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 151 3e-35
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 147 4e-34
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 144 2e-33
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 140 3e-32
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 138 1e-31
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 138 2e-31
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 135 2e-30
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 135 2e-30
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 135 2e-30
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 134 2e-30
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 131 2e-29
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 127 3e-28
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 126 5e-28
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 126 9e-28
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 121 3e-26
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 108 2e-22
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 106 8e-22
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 100 5e-20
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 89 1e-16
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 88 2e-16
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 86 1e-15
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 83 9e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 6e-14
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 80 6e-14
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 78 3e-13
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 77 6e-13
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 73 1e-11
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 72 2e-11
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 72 2e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 72 2e-11
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 71 3e-11
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 71 3e-11
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 3e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 71 4e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 4e-11
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 68 3e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 68 4e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 67 6e-10
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 66 8e-10
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 65 2e-09
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 65 2e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 65 2e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 64 4e-09
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 63 1e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 62 1e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 60 5e-08
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 60 5e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 59 1e-07
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 58 3e-07
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 58 3e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 56 2e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 55 3e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 54 5e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 53 8e-06
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 52 1e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 52 1e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 50 6e-05
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 50 1e-04
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 49 1e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 5e-04
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 47 7e-04
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 47 7e-04
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 46 0.001
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 46 0.001
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 46 0.001
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 46 0.001
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.004
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 42 0.020
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 42 0.020
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 42 0.020
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 41 0.046
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 41 0.046
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 40 0.081
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 40 0.11
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 38 0.43
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 38 0.43
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.57
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 36 1.3
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 227 bits (555), Expect = 3e-58
Identities = 131/233 (56%), Positives = 143/233 (61%), Gaps = 2/233 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAELG PGSLIG QIYNTIVTAHA N LVPL+LGAPD+AFPR
Sbjct: 34 IRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPR 93
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGIS
Sbjct: 94 MNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGIS 153
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S SFDQ+PLFV AVGITAF AGAIT+LLTDRNLN
Sbjct: 154 SILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLN 213
Query: 687 TSFFDPAGGGDP-XYINIYFDFLDI*SYIXFYQDLVXF-SYYSQKKEKRTLXV 839
TSFFDPAGGGDP Y ++++ F F QDLV F + +K EK L V
Sbjct: 214 TSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKKVEKSKLLV 266
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 214 bits (523), Expect = 2e-54
Identities = 116/202 (57%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR ELG PGSLIG QIYNTIVTAHA N L+PL+LGAPD+AFPR
Sbjct: 10 IRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPR 69
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGIS
Sbjct: 70 MNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGIS 129
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S SFDQ+PLF+ AVGITA AGAIT+LLTDRNLN
Sbjct: 130 SILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLN 189
Query: 687 TSFFDPAGGGDP-XYINIYFDF 749
TSFFDPAGGGDP Y ++++ F
Sbjct: 190 TSFFDPAGGGDPILYQHLFWFF 211
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 188 bits (459), Expect = 1e-46
Identities = 110/210 (52%), Positives = 128/210 (60%)
Frame = -1
Query: 721 GSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXX 542
GSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 7 GSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLI 66
Query: 541 XXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIR 362
I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++
Sbjct: 67 TVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVK 126
Query: 361 EGGRSQNLILFIRGNAISGAPSIRGTNQFXXXXXXXXXXXXXXXXKACAVTIVL*I*XAP 182
EGG +QNL+LFIRGNA+SGAP++ GTNQF KA AVT+ L I P
Sbjct: 127 EGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFP 185
Query: 181 INXPGLPNSARI*KDLKMFQ*CPEQRPQKK 92
I PG PNSARI K L P P+ K
Sbjct: 186 IKLPGCPNSARI-KSLSDVPTMPAHAPKMK 214
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 186 bits (452), Expect = 8e-46
Identities = 112/230 (48%), Positives = 129/230 (56%), Gaps = 5/230 (2%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAELG PG+L+G QIYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 38 IRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPR 97
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGIS
Sbjct: 98 MNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGIS 157
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S S Q PLFV +V ITA A IT+LLTDRNLN
Sbjct: 158 SILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLN 217
Query: 687 TSFFDPAGGGDP-XYINIYFDFLDI*SYIXFYQDLVXFS----YYSQKKE 821
T+FFDPAGGGDP Y ++++ F YI S YY+ KKE
Sbjct: 218 TTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKE 267
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 184 bits (447), Expect = 3e-45
Identities = 99/192 (51%), Positives = 111/192 (57%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR ELG PGS IG Q+YN +VTAHA N LVPL+LGAPD+AFPR
Sbjct: 20 IRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPR 79
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+S
Sbjct: 80 LNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVS 139
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S + + LFV +V ITA AGAIT+LLTDRN N
Sbjct: 140 SILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFN 199
Query: 687 TSFFDPAGGGDP 722
TSFFDPAGGGDP
Sbjct: 200 TSFFDPAGGGDP 211
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 181 bits (440), Expect = 2e-44
Identities = 108/230 (46%), Positives = 126/230 (54%), Gaps = 5/230 (2%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAEL PG+L+G QIYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 37 IRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPR 96
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+S
Sbjct: 97 MNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVS 156
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S S Q PLFV AV +TA A IT+LLTDRNLN
Sbjct: 157 SILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLN 216
Query: 687 TSFFDPAGGGDP-XYINIYFDFLDI*SYIXFYQDLVXFS----YYSQKKE 821
T+FFDPAGGGDP Y ++++ F YI S YY+ KKE
Sbjct: 217 TTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKE 266
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 180 bits (437), Expect = 6e-44
Identities = 107/230 (46%), Positives = 126/230 (54%), Gaps = 5/230 (2%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAELG PG+L+G IYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 37 IRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPR 96
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+S
Sbjct: 97 MNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVS 156
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S + Q PLFV +V ITA A IT+LLTDRNLN
Sbjct: 157 SILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLN 216
Query: 687 TSFFDPAGGGDP-XYINIYFDFLDI*SYIXFYQDLVXFS----YYSQKKE 821
T+FFDPAGGGDP Y ++++ F YI S YYS KKE
Sbjct: 217 TTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKE 266
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 178 bits (434), Expect = 1e-43
Identities = 106/230 (46%), Positives = 126/230 (54%), Gaps = 5/230 (2%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAEL PG+L+G QIYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 37 IRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPR 96
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+S
Sbjct: 97 MNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVS 156
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S + Q PLFV +V +TA A IT+LLTDRNLN
Sbjct: 157 SILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLN 216
Query: 687 TSFFDPAGGGDP-XYINIYFDFLDI*SYIXFYQDLVXFS----YYSQKKE 821
T+FFDPAGGGDP Y ++++ F YI S YY+ KKE
Sbjct: 217 TTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKE 266
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 174 bits (423), Expect = 3e-42
Identities = 95/202 (47%), Positives = 117/202 (57%), Gaps = 1/202 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR EL +PGS++G +YN IVTAHA N VPL++GAPD+AFPR
Sbjct: 38 IRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPR 97
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+S
Sbjct: 98 LNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLS 157
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S + ++PLFV +V ITA AGAIT+LLTDR N
Sbjct: 158 SILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFN 217
Query: 687 TSFFDPAGGGDP-XYINIYFDF 749
T+FFDPAGGGDP Y ++++ F
Sbjct: 218 TTFFDPAGGGDPILYQHLFWFF 239
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 170 bits (413), Expect = 4e-41
Identities = 104/239 (43%), Positives = 124/239 (51%), Gaps = 4/239 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG L G Q+YN I+TAHA N LVP+++GAPD+AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
ISS + +LPLFV A+ +TA AGAIT+LLTDRN
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRN 214
Query: 681 LNTSFFDPAGGGDPXYINIYFDFLDI*SYIXFYQDLVXFSY--YSQKKEKRTLXVXNXY 851
NTSF+DPAGGGDP F + YI F+ + F+ YS T V N +
Sbjct: 215 FNTSFYDPAGGGDPILYQHLFSKTTL--YISFFYLIYKFTLLKYSIYTNTGTTTVENVF 271
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 169 bits (411), Expect = 8e-41
Identities = 93/202 (46%), Positives = 115/202 (56%), Gaps = 1/202 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR ELG PGSLIG QIYN+IVT+HA N L+PL+LG+PD++FPR
Sbjct: 21 IRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPR 80
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG S
Sbjct: 81 MNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGAS 140
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S + D++ LF +V ITA AGAIT+LLTDRN+N
Sbjct: 141 SIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMN 200
Query: 687 TSFFDPAGGGDP-XYINIYFDF 749
TSFFDP+GGGDP Y ++++ F
Sbjct: 201 TSFFDPSGGGDPILYQHLFWFF 222
Score = 33.5 bits (73), Expect = 7.0
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 719 PXLYQHLF*FFGHLKLY-XILP-XXXXXXXXXTEKGKK-NFG 835
P LYQHLF FFGH ++Y ILP E GKK FG
Sbjct: 212 PILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFG 253
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 168 bits (409), Expect = 1e-40
Identities = 96/204 (47%), Positives = 115/204 (56%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG L G Q+YN I+TAHA N LVP+++GAPD+AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
ISS + +LPLFV A+ +TA AGAIT+LLTDRN
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRN 214
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSF+DPAGGGDP Y ++++ F
Sbjct: 215 FNTSFYDPAGGGDPILYQHLFWFF 238
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 167 bits (407), Expect = 2e-40
Identities = 92/204 (45%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGSLI--GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG I G Q+YN ++TAHA N VP+++GAPD+AF
Sbjct: 38 IRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAF 97
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
+SS + +LPLFV +V +TAF AGAIT+LLTDRN
Sbjct: 158 VSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRN 217
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NT+FFDPAGGGDP Y ++++ F
Sbjct: 218 FNTTFFDPAGGGDPILYQHLFWFF 241
Score = 33.1 bits (72), Expect = 9.3
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 719 PXLYQHLF*FFGHLKLY-XILP-XXXXXXXXXTEKGKKNFG 835
P LYQHLF FFGH ++Y ILP T GK FG
Sbjct: 231 PILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGKPVFG 271
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 164 bits (399), Expect = 2e-39
Identities = 92/186 (49%), Positives = 105/186 (56%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAEL PG+L+G QIYN IVTAHA N L+PL++GAPD+AFPR
Sbjct: 26 IRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPR 85
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGIS
Sbjct: 86 MNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGIS 145
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S S Q PLFV AV ITA A IT+LLTDRNLN
Sbjct: 146 SILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLN 205
Query: 687 TSFFDP 704
T+FFDP
Sbjct: 206 TTFFDP 211
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 162 bits (393), Expect = 1e-38
Identities = 90/204 (44%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL P + L+G QIYN ++TAHA N LVP+++G+PD+AF
Sbjct: 43 IRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAF 102
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
SS S ++PLFV ++ +TAF AGAIT+LLTDRN
Sbjct: 163 ASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRN 222
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSFFD +GGGDP Y ++++ F
Sbjct: 223 FNTSFFDASGGGDPILYQHLFWFF 246
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 152 bits (368), Expect = 1e-35
Identities = 89/203 (43%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PGS L G Q++N +V HA N ++PL++GA D++F
Sbjct: 36 IRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSF 95
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
ISS S ++PLFV A+ ITAF + IT+LL DRN
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRN 215
Query: 681 LNTSFFDPAGGGDPXYINIYFDF 749
NTSFF+ AGGGDP + F F
Sbjct: 216 FNTSFFEVAGGGDPIFYQHAFWF 238
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 151 bits (365), Expect = 3e-35
Identities = 89/204 (43%), Positives = 110/204 (53%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PGS L G Q++N +V HA N L+PL++GA D AF
Sbjct: 36 IRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAF 95
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
ISS + +LPLFV ++ ITAF + IT+LL DRN
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRN 215
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSFF+ +GGGDP Y ++++ F
Sbjct: 216 FNTSFFEVSGGGDPILYEHLFWFF 239
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 151 bits (365), Expect = 3e-35
Identities = 89/204 (43%), Positives = 110/204 (53%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PGS L G Q++N +V HA N L+PL++GA D AF
Sbjct: 36 IRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAF 95
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
ISS + +LPLFV ++ ITAF + IT+LL DRN
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRN 215
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSFF+ +GGGDP Y ++++ F
Sbjct: 216 FNTSFFEVSGGGDPILYEHLFWFF 239
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 147 bits (356), Expect = 4e-34
Identities = 87/203 (42%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Frame = +3
Query: 147 IRAELGNPG-SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 323
IR EL PG I Q+YN+I+TAHA N L+PL LG PD+ FP
Sbjct: 37 IRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFP 96
Query: 324 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 503
R+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+GI
Sbjct: 97 RLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGI 156
Query: 504 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 683
SS +L LF AV ITA AG IT++LTDRN
Sbjct: 157 SSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNF 216
Query: 684 NTSFFDPAGGGDP-XYINIYFDF 749
NTSFF+ AGGGDP Y ++++ F
Sbjct: 217 NTSFFEVAGGGDPILYQHLFWFF 239
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 144 bits (350), Expect = 2e-33
Identities = 85/204 (41%), Positives = 108/204 (52%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG L G Q++N +V HA N ++PL++GA D AF
Sbjct: 36 IRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAF 95
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
ISS + +LPLFV A+ ITA + +T+LL DRN
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRN 215
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSFF+ AGGGDP Y ++++ F
Sbjct: 216 FNTSFFEVAGGGDPILYEHLFWFF 239
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 140 bits (340), Expect = 3e-32
Identities = 81/203 (39%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Frame = +3
Query: 147 IRAELGNPG-SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 323
IR EL PG I Q+YN+I+T+H N L+P+++G PD+AFP
Sbjct: 63 IRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFP 122
Query: 324 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 503
R+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+GI
Sbjct: 123 RLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGI 182
Query: 504 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 683
SS +L LF AV ITA A AIT+LLTDRNL
Sbjct: 183 SSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNL 242
Query: 684 NTSFFDPAGGGDP-XYINIYFDF 749
NTSF++ AGGGD Y ++++ F
Sbjct: 243 NTSFYELAGGGDAILYQHLFWFF 265
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 138 bits (335), Expect = 1e-31
Identities = 80/199 (40%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Frame = +3
Query: 129 IFKSF*IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 302
+ S +R EL PG L G YN I T H N VP+++G
Sbjct: 33 VLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIG 92
Query: 303 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 482
APD++FPR+NN F E G GTG TVYPPLSS +H G SVDL IF
Sbjct: 93 APDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIF 152
Query: 483 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 662
S HL GI S LPLFV +V +T+F A AIT+
Sbjct: 153 SFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITL 212
Query: 663 LLTDRNLNTSFFDPAGGGD 719
LL DRN NTSF+DP GGGD
Sbjct: 213 LLFDRNFNTSFYDPVGGGD 231
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 138 bits (333), Expect = 2e-31
Identities = 79/153 (51%), Positives = 88/153 (57%)
Frame = +3
Query: 291 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 470
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 471 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 650
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 651 AITILLTDRNLNTSFFDPAGGGDPXYINIYFDF 749
AIT+LLTDRN+NTSFFDPAGGGDP F F
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWF 156
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 135 bits (326), Expect = 2e-30
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELG--NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
+R EL NP L+ Q++N ++TAHA N LVPL +G+ D AF
Sbjct: 53 MRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAF 112
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
+SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSFF +GGGDP Y +I++ F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 135 bits (326), Expect = 2e-30
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELG--NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
+R EL NP L+ Q++N ++TAHA N LVPL +G+ D AF
Sbjct: 53 MRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAF 112
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
+SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSFF +GGGDP Y +I++ F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 135 bits (326), Expect = 2e-30
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELG--NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
+R EL NP L+ Q++N ++TAHA N LVPL +G+ D AF
Sbjct: 53 MRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAF 112
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
+SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSFF +GGGDP Y +I++ F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 134 bits (325), Expect = 2e-30
Identities = 77/202 (38%), Positives = 107/202 (52%), Gaps = 3/202 (1%)
Frame = +3
Query: 147 IRAELG--NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
+R EL NP L+ Q++N ++TAHA N LVPL +G+ D AF
Sbjct: 53 MRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAF 112
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
+SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 681 LNTSFFDPAGGGDP-XYINIYF 743
NTSFF +GGGDP Y +I++
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIFY 254
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 131 bits (317), Expect = 2e-29
Identities = 79/193 (40%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL N GS L G Q +N ++TAHA N L+PL+LGA D+AF
Sbjct: 41 IRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAF 100
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 101 ARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSG 160
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
SS ++ +PLF AV TA A +T+ + DRN
Sbjct: 161 FSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRN 220
Query: 681 LNTSFFDPAGGGD 719
NTSFF+ AGGGD
Sbjct: 221 FNTSFFEYAGGGD 233
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 127 bits (307), Expect = 3e-28
Identities = 65/185 (35%), Positives = 94/185 (50%)
Frame = +3
Query: 195 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 374
++N ++T H N +PL++GAPD+AFPR+NN+ +
Sbjct: 159 LWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLA 218
Query: 375 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 554
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 219 FCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMR 278
Query: 555 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPXYIN 734
+ ++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDP
Sbjct: 279 APGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQ 338
Query: 735 IYFDF 749
F F
Sbjct: 339 HIFWF 343
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 126 bits (305), Expect = 5e-28
Identities = 81/206 (39%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Frame = +3
Query: 147 IRAELGNPG-SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 323
IR EL PG I Q+YN+I+TAHA N L+PL++G PD+AFP
Sbjct: 65 IRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFP 124
Query: 324 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLH 491
R+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+LH
Sbjct: 125 RLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALH 184
Query: 492 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 671
L+G+SS +L LF A + IT++LT
Sbjct: 185 LSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL-------GITMVLT 237
Query: 672 DRNLNTSFFDPAGGGDPXYINIYFDF 749
DRN NTSFF+ AGGGDP F F
Sbjct: 238 DRNFNTSFFEVAGGGDPILFQHLFWF 263
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 126 bits (303), Expect = 9e-28
Identities = 76/201 (37%), Positives = 103/201 (51%), Gaps = 5/201 (2%)
Frame = +3
Query: 162 GNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 341
G +L A ++N ++TAH N VP+++GAPD+AFPR+NNI
Sbjct: 82 GPSATLDQAYHLWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNIS 141
Query: 342 FXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 509
F V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 142 FWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Query: 510 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 689
+ ++PLFV +V +TAF A AIT+LLTDRN T
Sbjct: 201 ILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGT 260
Query: 690 SFFDPAGGGDP-XYINIYFDF 749
+F+D AGGGDP Y ++++ F
Sbjct: 261 TFYDAAGGGDPELYQHLFWFF 281
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 121 bits (291), Expect = 3e-26
Identities = 73/170 (42%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG L G Q+YN I+TAHA N LVP+++GAPD+AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 650
ISS + +LPLFV A+ +TA AG
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 108 bits (260), Expect = 2e-22
Identities = 67/205 (32%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Frame = +3
Query: 111 SGHHWNIFKSF*IRAELG--NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*L 284
SG ++ F IR EL G L G Q YN ++T+H N
Sbjct: 27 SGFVGYVYSLF-IRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYF 85
Query: 285 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRS 464
+P++ G PD+ FPR+NN+ F + E G G G T+YP L H +
Sbjct: 86 IPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLA 145
Query: 465 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 644
D +F++HL GISS SF LF+ A ITA
Sbjct: 146 CDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVL 205
Query: 645 AGAITILLTDRNLNTSFFDPAGGGD 719
AG +T++L DRN NTSF+D GGGD
Sbjct: 206 AGGVTLILCDRNFNTSFYDVVGGGD 230
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 106 bits (254), Expect = 8e-22
Identities = 64/204 (31%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL +PG G+ Q+YN+++T H N ++PL+LGAP++AF
Sbjct: 46 IRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAF 105
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
PR+N + F + G G+ T YPPLS S+D I LH G
Sbjct: 106 PRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVG 164
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
I S + DQ+ +FV +T+F AG++ LL DRN
Sbjct: 165 IGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRN 224
Query: 681 LNTSFFDPAGGGDP-XYINIYFDF 749
NTSF+D GG+P Y ++++ F
Sbjct: 225 FNTSFYDTKKGGNPLLYQHLFWFF 248
Score = 33.5 bits (73), Expect = 7.0
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 719 PXLYQHLF*FFGHLKLYXIL 778
P LYQHLF FFGH ++Y I+
Sbjct: 238 PLLYQHLFWFFGHPEVYVII 257
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 100 bits (239), Expect = 5e-20
Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R EL +PG + +Y++I+T HA N +PL++ D++ PR
Sbjct: 39 MRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPR 98
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG+S
Sbjct: 99 LNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMS 158
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 683
S F L P+ + + T+ A +T+LL DR+
Sbjct: 159 SIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHF 218
Query: 684 NTSFFDPAGGGDP 722
+TSF+ P GGGDP
Sbjct: 219 STSFYYPEGGGDP 231
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 89.0 bits (211), Expect = 1e-16
Identities = 49/97 (50%), Positives = 57/97 (58%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAELG PG+L+G Q N IVTAHA N LVPL++GAPD+AFPR
Sbjct: 38 IRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPR 97
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 437
+NN+ F VE GAGTG TVYPPL+
Sbjct: 98 MNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 88.2 bits (209), Expect = 2e-16
Identities = 70/200 (35%), Positives = 82/200 (41%)
Frame = +3
Query: 150 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 329
R L G +IG QI VTA A L PL +GAP +A PR+
Sbjct: 28 RXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRL 87
Query: 330 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 509
N+ F + G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 88 XNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Query: 510 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 689
++ LF A AIT+L R N
Sbjct: 148 XLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNX 207
Query: 690 SFFDPAGGGDPXYINIYFDF 749
SFF P G P +F F
Sbjct: 208 SFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 85.8 bits (203), Expect = 1e-15
Identities = 51/121 (42%), Positives = 61/121 (50%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR ELG PGSL+ Q+YN +VTAH N LVPL+LGAPD+AFPR
Sbjct: 21 IRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPR 80
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F + G + PL G SVDLAIF LHLAG+S
Sbjct: 81 MNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVS 138
Query: 507 S 509
S
Sbjct: 139 S 139
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 83.0 bits (196), Expect = 9e-15
Identities = 62/216 (28%), Positives = 91/216 (42%), Gaps = 1/216 (0%)
Frame = +3
Query: 168 PGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 347
PG + + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 348 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 527
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 528 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 707
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 708 GGGDP-XYINIYFDFLDI*SYIXFYQDLVXFSYYSQ 812
GGDP Y NI++ + + + Q L F +YS+
Sbjct: 180 KGGDPLIYQNIFWFYS---HPVVYVQVLPVFGFYSE 212
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 6e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +3
Query: 291 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 470
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 471 LAIFS 485
LAI+S
Sbjct: 61 LAIYS 65
Score = 40.7 bits (91), Expect = 0.046
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +2
Query: 590 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRP 721
CM C +Y TCFS S+Y IIN K KY IF W P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 80.2 bits (189), Expect = 6e-14
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Frame = +3
Query: 195 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 374
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 375 XXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXX 551
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHL 177
Query: 552 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP-XY 728
+ L + ++ IT+ G + +LL+D + NT FFDP GDP Y
Sbjct: 178 RAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILY 237
Query: 729 INIYFDF 749
++++ F
Sbjct: 238 QHLFWFF 244
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 77.8 bits (183), Expect = 3e-13
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Frame = +3
Query: 132 FKSF*IRAELGNPGSLI---GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 302
+ S IR EL G I +IYN + T H N L P++LG
Sbjct: 37 YMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLG 96
Query: 303 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 482
D+ +PR+N +E G+GTG T+YPPLS+++++ G +D IF
Sbjct: 97 YCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIF 154
Query: 483 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 662
L AGI+S D++ ++ +T+F +
Sbjct: 155 GLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLM 214
Query: 663 LLTDRNLNTSFFDPAGGGDP-XYINIYFDF 749
+ DR+ NT FF+ + GDP Y ++++ F
Sbjct: 215 VFLDRHYNTMFFESSNSGDPVLYQHLFWFF 244
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 77.0 bits (181), Expect = 6e-13
Identities = 60/201 (29%), Positives = 80/201 (39%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR L +P + + +YN +VT H N +P+ L D+ PR
Sbjct: 135 IRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPR 194
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N++ G G G T+YPPLS G VD +FSLHLAG+S
Sbjct: 195 LNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVS 251
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S S + V A T+ A IT+LL DRN
Sbjct: 252 SLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFG 306
Query: 687 TSFFDPAGGGDPXYINIYFDF 749
T+FF+P+GGGDP F F
Sbjct: 307 TAFFEPSGGGDPILFQHLFWF 327
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 72.5 bits (170), Expect = 1e-11
Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Frame = +3
Query: 150 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 329
R +L P L +YN VT H N L+P PD+ FPR+
Sbjct: 35 RLQLAFPSILTS--DVYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRM 92
Query: 330 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 509
N + F ++ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 93 NALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Query: 510 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 689
+ L LF ++ + + A IT++LTD++L T
Sbjct: 144 LISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGT 201
Query: 690 SFFDPAGGGDP-XYINIYFDF 749
F+D GGDP Y ++++ F
Sbjct: 202 CFYDATMGGDPLLYQHLFWFF 222
Score = 33.1 bits (72), Expect = 9.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 719 PXLYQHLF*FFGHLKLYXIL 778
P LYQHLF FFGH ++Y ++
Sbjct: 212 PLLYQHLFWFFGHPEVYVVI 231
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 72.1 bits (169), Expect = 2e-11
Identities = 55/204 (26%), Positives = 79/204 (38%), Gaps = 3/204 (1%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R EL P + + +YN + T H N L+P ++GAPD+AFP+
Sbjct: 61 VRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
Query: 327 INNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLA 497
+N F G A +G YPP+S + + H L I ++ L+
Sbjct: 120 LNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALS 179
Query: 498 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 677
GISS F ++P+FV G +LL D
Sbjct: 180 GISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDL 239
Query: 678 NLNTSFFDPAGGGDPXYINIYFDF 749
+ TSFF P GGGDP +F F
Sbjct: 240 SFGTSFFRPEGGGDPVLFQHFFWF 263
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 72.1 bits (169), Expect = 2e-11
Identities = 53/204 (25%), Positives = 80/204 (39%)
Frame = +3
Query: 132 FKSF*IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 311
F++ +R +L P + + +++N + T H N VPL++GA D
Sbjct: 52 FEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARD 110
Query: 312 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 491
+AFPR+N+ F + + G Y PLSS + VD I L
Sbjct: 111 VAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLL 170
Query: 492 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 671
+ GI S S ++PLFV + + A A+ +LL
Sbjct: 171 IMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLI 230
Query: 672 DRNLNTSFFDPAGGGDPXYINIYF 743
DR L ++FFDP GG YF
Sbjct: 231 DRWLGSAFFDPTRGGSAVLWQHYF 254
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 71.7 bits (168), Expect = 2e-11
Identities = 61/197 (30%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R EL +PG + + YN+++T+H N L+PL++GA D+AFPR
Sbjct: 119 MRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPR 177
Query: 327 INNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS-----SNIAHRGRSVDLAIF 482
IN I F I E A TG T+Y PLS N A+ G VDL +
Sbjct: 178 INAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--VDLMLL 235
Query: 483 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 662
LHL+G+S+ S+ L +F + + AI +
Sbjct: 236 GLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLLGSAIMM 295
Query: 663 LLTDRNLNTSFFDPAGG 713
LL DRN TSFF GG
Sbjct: 296 LLFDRNFGTSFFAGEGG 312
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 71.7 bits (168), Expect = 2e-11
Identities = 44/102 (43%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG L G Q+YN I+TAHA N LVP+++GAPD+AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 446
PR+NNI F VE GAGTG TV LS I
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 71.3 bits (167), Expect = 3e-11
Identities = 50/181 (27%), Positives = 70/181 (38%), Gaps = 6/181 (3%)
Frame = +3
Query: 198 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 377
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 378 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 554
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 555 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 719
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 720 P 722
P
Sbjct: 266 P 266
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 71.3 bits (167), Expect = 3e-11
Identities = 54/201 (26%), Positives = 78/201 (38%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR EL PG I YN + T H N L+P+++GA D+AFP+
Sbjct: 60 IRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPK 119
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N + F +V+ GA TG T Y P S+ + V L F L G S
Sbjct: 120 LNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFS 175
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S + +LPLFV ++ T+ ++ ++ +
Sbjct: 176 SILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFG 235
Query: 687 TSFFDPAGGGDPXYINIYFDF 749
FDPA GGDP +F F
Sbjct: 236 WGIFDPARGGDPVLFQHFFWF 256
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 71.3 bits (167), Expect = 3e-11
Identities = 58/201 (28%), Positives = 76/201 (37%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R EL P ++YN ++T H N L+PL++G D+AFPR
Sbjct: 52 MRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPR 110
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N + F V G T YPPLS G +L I SL L G S
Sbjct: 111 LNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTS 167
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S +PLF A+ T+ A A+ +L D
Sbjct: 168 SILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAG 227
Query: 687 TSFFDPAGGGDPXYINIYFDF 749
TSFF+P GGGDP F F
Sbjct: 228 TSFFNPVGGGDPVVYQHLFWF 248
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 70.9 bits (166), Expect = 4e-11
Identities = 58/202 (28%), Positives = 78/202 (38%), Gaps = 1/202 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR EL PG I YN T H N ++PL+LGA D+AFPR
Sbjct: 67 IRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPR 126
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N + ++ G TG T Y P S AH +V +F + G S
Sbjct: 127 LNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFS 182
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL- 683
S ++ ++PLFV A+ T+ G + +L+T NL
Sbjct: 183 SIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLF 241
Query: 684 NTSFFDPAGGGDPXYINIYFDF 749
FDPA GGDP F F
Sbjct: 242 GFGMFDPARGGDPVLFQHLFWF 263
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 4e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +3
Query: 429 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 608
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 609 TAFXXXXXXXXXAGAITILLTDR 677
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 33.1 bits (72), Expect = 9.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +2
Query: 263 WRXWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 388
W WKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 68.1 bits (159), Expect = 3e-10
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Frame = +3
Query: 147 IRAELGNPGSLI----GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 314
IR EL G I IYN +T H N L+P+++G ++
Sbjct: 43 IRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSEL 102
Query: 315 AFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSL 488
+ PR+N I F + + +G T+YPPLS+ A G ++DL++ +
Sbjct: 103 SMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVV 162
Query: 489 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILL 668
H+ GISS +F + ++ ++ +T+ AIT LL
Sbjct: 163 HVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGLL 222
Query: 669 TDRNLNTSFFDPAGGGDP-XYINIYFDF 749
DRN+N++ +D GDP Y ++++ F
Sbjct: 223 LDRNINSTIYDVI--GDPVLYQHLFWFF 248
Score = 33.5 bits (73), Expect = 7.0
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 719 PXLYQHLF*FFGHLKLYXIL 778
P LYQHLF FFGH ++Y I+
Sbjct: 238 PVLYQHLFWFFGHPEVYVII 257
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 67.7 bits (158), Expect = 4e-10
Identities = 52/202 (25%), Positives = 77/202 (38%), Gaps = 1/202 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR +L P + + YN I+T H N +VPL+LGA D+A PR
Sbjct: 49 IRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPR 108
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 503
+N + GA G T Y P S A VD + ++ L G
Sbjct: 109 VNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLLGF 165
Query: 504 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 683
SS S ++P++V +V + A ++L +R +
Sbjct: 166 SSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKI 225
Query: 684 NTSFFDPAGGGDPXYINIYFDF 749
S+F+PA GGDP +F F
Sbjct: 226 GLSWFNPAVGGDPVLFQQFFWF 247
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 66.9 bits (156), Expect = 6e-10
Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 1/202 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRAEL PG + + +N + T H N ++PL +GAPD+AFPR
Sbjct: 63 IRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPR 121
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 503
+N F + GA G T+Y PLS I G D+ I + GI
Sbjct: 122 LNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGI 181
Query: 504 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 683
S + ++P+F + + + A +L DR L
Sbjct: 182 GSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKL 241
Query: 684 NTSFFDPAGGGDPXYINIYFDF 749
+DPA GG + ++++ F
Sbjct: 242 GGHLYDPANGGSLLWQHLFWFF 263
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 66.5 bits (155), Expect = 8e-10
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +3
Query: 147 IRAELGNPGSLI--GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG+ I G Q+YN ++TAHA N VP+++G+PD+AF
Sbjct: 39 IRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAF 98
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
PR+NNI F +VE G G+G TV
Sbjct: 99 PRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 65.3 bits (152), Expect = 2e-09
Identities = 50/191 (26%), Positives = 72/191 (37%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R +L P + YN I T H LVPL++G IAFPR
Sbjct: 54 MRLQLAQPEARFIGPDRYNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPR 112
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N + V+ G G Y PLS G+ D+ + +S
Sbjct: 113 LNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVS 172
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ S D++PLFV ++ +T+F A T L+ DR +
Sbjct: 173 ALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVG 232
Query: 687 TSFFDPAGGGD 719
T FF+PA GGD
Sbjct: 233 THFFNPAEGGD 243
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL N GS L G Q +N ++TAHA N L+PL+LGA D+AF
Sbjct: 41 IRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAF 100
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 446
R+NNI F +VE GAGTG TV SS +
Sbjct: 101 ARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 64.9 bits (151), Expect = 2e-09
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 2/203 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R EL + + +YN ++T+H N +PL++ A D+AFPR
Sbjct: 93 MRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPR 151
Query: 327 INNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 500
IN I F ++ A T T+Y PLS ++ +VD+ + LHL G
Sbjct: 152 INAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTG 209
Query: 501 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 680
+S+ + L +F + + A+ +LL DRN
Sbjct: 210 VSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLDRN 269
Query: 681 LNTSFFDPAGGGDPXYINIYFDF 749
T+FF A GGDP + F F
Sbjct: 270 FGTTFFTVA-GGDPIFWQHLFWF 291
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 64.1 bits (149), Expect = 4e-09
Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 2/190 (1%)
Frame = +3
Query: 150 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 329
R +L P S Y VT H N +VPL +GA D+AFPR+
Sbjct: 47 RVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIGARDLAFPRL 105
Query: 330 NNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
N + + E+GA G T+Y PL++ I G +DLA ++ L +S
Sbjct: 106 NALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFSLS 165
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ ++P+F ++ T +LL DRNL
Sbjct: 166 VTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLG 225
Query: 687 TSFF-DPAGG 713
T FF +PAGG
Sbjct: 226 TEFFLNPAGG 235
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 62.9 bits (146), Expect = 1e-08
Identities = 49/191 (25%), Positives = 70/191 (36%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R +LG P + +YN + T H N +VPL++GA D+AFPR
Sbjct: 56 MRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPR 114
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N + V G Y PL+ VD I + L G++
Sbjct: 115 LNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVA 174
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S + +++PLFV + AF A LL DR+
Sbjct: 175 SIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFG 234
Query: 687 TSFFDPAGGGD 719
T FF P GGD
Sbjct: 235 TRFFLPNLGGD 245
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 62.5 bits (145), Expect = 1e-08
Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 4/179 (2%)
Frame = +3
Query: 186 AXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 365
A + Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 84 APEFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAF 143
Query: 366 XXXXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 533
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 144 FFFGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYM 203
Query: 534 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 710
+ +LPL + A+ ITA A ++L DR + T FF P G
Sbjct: 204 TTIIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEG 262
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 60.5 bits (140), Expect = 5e-08
Identities = 56/213 (26%), Positives = 83/213 (38%), Gaps = 3/213 (1%)
Frame = +3
Query: 147 IRAELGNPGSLI-GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 323
IR EL G I +YNT + H N +PL++GA D+AFP
Sbjct: 39 IRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFP 98
Query: 324 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 503
R+N + + + T YPP S I H + FS+ L G
Sbjct: 99 RVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVLLLGF 155
Query: 504 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRN 680
+S +++L +FV A + AF G A+T+L D+
Sbjct: 156 ASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKY 214
Query: 681 LNTSFFDPAGGGDP-XYINIYFDFLDI*SYIXF 776
+ T FFD A GGD Y N+++ + Y+ F
Sbjct: 215 IGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIF 247
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 60.5 bits (140), Expect = 5e-08
Identities = 48/200 (24%), Positives = 73/200 (36%), Gaps = 1/200 (0%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+RA+L P + YN I T H N +VPL +GA D+AFP
Sbjct: 78 MRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPY 136
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+NN+ F ++ G T Y PL+SN G + + L +AGI
Sbjct: 137 LNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIG 196
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ + ++P+F IT A+ +L DR
Sbjct: 197 TLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFG 256
Query: 687 TSFFDPAGGGDP-XYINIYF 743
FF GG P + N+++
Sbjct: 257 AHFFTLEAGGMPMLWANLFW 276
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 387 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 509
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +3
Query: 147 IRAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL PG+ L G Q++N +V HA N L+PL++GA D++F
Sbjct: 36 IRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSF 95
Query: 321 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
R+NNI F +VE+GAGTG TV
Sbjct: 96 ARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 58.0 bits (134), Expect = 3e-07
Identities = 46/164 (28%), Positives = 66/164 (40%), Gaps = 6/164 (3%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 452
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 453 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 632
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 633 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPXYINIYFDF 749
A +LL +R+L FF DPA GDP F F
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWF 247
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 58.0 bits (134), Expect = 3e-07
Identities = 41/191 (21%), Positives = 73/191 (38%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR +L P + + Q YN ++T H N +VPL +GA D++FP
Sbjct: 49 IRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPF 107
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N + F + G T Y LS + +G +D + L ++G+
Sbjct: 108 LNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLG 165
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ ++ +LPLF + + + +++ DR
Sbjct: 166 TLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFG 225
Query: 687 TSFFDPAGGGD 719
T+FF+P GG+
Sbjct: 226 TNFFNPELGGN 236
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 55.6 bits (128), Expect = 2e-06
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 2/201 (0%)
Frame = +3
Query: 147 IRAELGNPGS-LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 323
IRAEL PG+ I +N + T H N VP+++ D+A+P
Sbjct: 45 IRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMVRYKDMAYP 103
Query: 324 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 503
++N I F + T PP S I+ G + D+ IF L + GI
Sbjct: 104 KLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWIFGLKILGI 157
Query: 504 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 683
SS S Q+PL + ++ A A+ +LLTDR
Sbjct: 158 SSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLG 217
Query: 684 NTSFFDPAGGGDP-XYINIYF 743
+ FF+PA GGDP Y ++++
Sbjct: 218 VSGFFNPAVGGDPIAYAHLFW 238
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 54.8 bits (126), Expect = 3e-06
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 455
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 456 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 635
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 636 XXXAGAITILLTDRNLNTSFFD-PAGGGDPXYINIYF 743
GA+ +L DR L+ FF GG Y+N+++
Sbjct: 245 PILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFW 281
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 54.0 bits (124), Expect = 5e-06
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 1/157 (0%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 455
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 456 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 635
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 636 XXXAGAITILLTDRNLNTSFFDPAGGGDP-XYINIYF 743
A+ +L DR L+ F GG+P Y+N+++
Sbjct: 244 PILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFW 280
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 53.2 bits (122), Expect = 8e-06
Identities = 44/191 (23%), Positives = 67/191 (35%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRA+L P S + YN + T H L+P +LG+ D+AFPR
Sbjct: 54 IRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPR 112
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+ F + +G +YPPLSS + G + D + + IS
Sbjct: 113 LTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGITFVEIS 172
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ S ++P+F +TA +L +R +
Sbjct: 173 AIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFD 232
Query: 687 TSFFDPAGGGD 719
FF A GGD
Sbjct: 233 MPFFQAAAGGD 243
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 52.4 bits (120), Expect = 1e-05
Identities = 43/192 (22%), Positives = 70/192 (36%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R +L P + + + YN + T H L+PL++GA D+ FPR
Sbjct: 80 VRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMIGARDLVFPR 138
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+ + + + G +Y PLS++ G S D + + LA I+
Sbjct: 139 LGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGITLAEIA 198
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S S ++P+ + + TAF +L +R L
Sbjct: 199 SVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLG 258
Query: 687 TSFFDPAGGGDP 722
FFD GGDP
Sbjct: 259 LPFFDHTLGGDP 270
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 52.4 bits (120), Expect = 1e-05
Identities = 46/192 (23%), Positives = 70/192 (36%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R +L P + + Y+++ T H N L PL+LG+ D+AFPR
Sbjct: 74 MRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAFPR 132
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+ + + G Y PL+S G ++D+ + L GIS
Sbjct: 133 LTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLGIS 192
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ S D+LP+ V + + A +L DRN
Sbjct: 193 TTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAG 252
Query: 687 TSFFDPAGGGDP 722
T FFD A GG P
Sbjct: 253 THFFDVAHGGRP 264
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 50.4 bits (115), Expect = 6e-05
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 4/173 (2%)
Frame = +3
Query: 192 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 371
+ Y +VT H N L+PL +GA D+A +N + +
Sbjct: 100 EFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSSVI 159
Query: 372 XXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 539
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 160 MFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITT 219
Query: 540 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 698
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 220 VINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFF 272
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 49.6 bits (113), Expect = 1e-04
Identities = 53/195 (27%), Positives = 75/195 (38%), Gaps = 6/195 (3%)
Frame = +3
Query: 138 SF*IRAELGNPG--SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 311
S+ +R +LG PG S I A Q Y +T H N L+PL++GA D
Sbjct: 60 SWLMRLQLGFPGTFSFIDANQ-YLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARD 118
Query: 312 IAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIF 482
+ FP +N + + V G G G T+YPP + S + + L +
Sbjct: 119 MVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLS 178
Query: 483 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAIT 659
SL L I + +LPL V + T G++
Sbjct: 179 SLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVM 238
Query: 660 ILLTDRNLNTSFFDP 704
+LL DR L TSFF P
Sbjct: 239 LLL-DRLLGTSFFMP 252
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 49.2 bits (112), Expect = 1e-04
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 1/159 (0%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 455
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 456 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 635
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 636 XXXAGAITILLTDRNLNTSFF-DPAGGGDPXYINIYFDF 749
L DR L+ FF + GG ++N+++ F
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLF 302
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.4 bits (110), Expect = 2e-04
Identities = 41/191 (21%), Positives = 68/191 (35%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IRA+L +P S + Y + T H L+P +LG+ D+A+PR
Sbjct: 54 IRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPR 112
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
++ F + +G +YPPL+S + G + D + + IS
Sbjct: 113 LSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGITFVEIS 172
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ S D++P++ +TA +L +R
Sbjct: 173 AIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFG 232
Query: 687 TSFFDPAGGGD 719
FF A GGD
Sbjct: 233 LPFFQVAEGGD 243
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 593 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 697
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 46.8 bits (106), Expect = 7e-04
Identities = 43/201 (21%), Positives = 66/201 (32%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
IR +L P + YN ++T HA N +PL LG D+A PR
Sbjct: 57 IRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPR 116
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
+N G T Y PL+ + G SV + ++ L G+
Sbjct: 117 LNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMV--AVILNGLG 174
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S ++P+F ++ T+ A + + L
Sbjct: 175 SLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLG 234
Query: 687 TSFFDPAGGGDPXYINIYFDF 749
S F+P GG P +F F
Sbjct: 235 LSMFNPGIGGVPVLYQQFFWF 255
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 46.8 bits (106), Expect = 7e-04
Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 1/155 (0%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 455
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 456 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 635
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 636 XXXAGAITILLTDRNLNTSFFDP-AGGGDPXYINI 737
+ + DR L+T F+ GG YIN+
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINL 273
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 46.0 bits (104), Expect = 0.001
Identities = 44/206 (21%), Positives = 75/206 (36%), Gaps = 5/206 (2%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R +L PG + + +N + T HA N +PL++GA D+AFPR
Sbjct: 54 MRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPR 112
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSVDLAIFSLHL 494
+N + ++ G G Y L+S G D L L
Sbjct: 113 LNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWTLGLLL 172
Query: 495 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 674
GI + + ++P+FV +T+ A+ +L+ D
Sbjct: 173 LGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFD 232
Query: 675 RNLNTSFFDPAGGGD-PXYINIYFDF 749
R +FF+ GG Y ++++ F
Sbjct: 233 RTFAANFFEVLRGGSVVFYQHLFWTF 258
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 46.0 bits (104), Expect = 0.001
Identities = 37/165 (22%), Positives = 61/165 (36%)
Frame = +3
Query: 282 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 461
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 462 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 641
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 642 XAGAITILLTDRNLNTSFFDPAGGGDPXYINIYFDFLDI*SYIXF 776
A +L DR FF A G + ++++ F YI F
Sbjct: 225 LVIASLMLALDRMAGMHFFTAASGDPILWQHLFWFFGHPEVYIIF 269
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 46.0 bits (104), Expect = 0.001
Identities = 38/176 (21%), Positives = 60/176 (34%), Gaps = 3/176 (1%)
Frame = +3
Query: 192 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 371
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 372 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 542
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 543 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 710
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSG 265
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 46.0 bits (104), Expect = 0.001
Identities = 47/194 (24%), Positives = 70/194 (36%), Gaps = 1/194 (0%)
Frame = +3
Query: 171 GSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 350
G + A Q YN +VT H L+PL +G+ D+ +PR+N + +
Sbjct: 76 GRFLDALQ-YNQLVTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWL 133
Query: 351 XXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 527
+ G TG TVY PLSS D A ++ L GI +
Sbjct: 134 FLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTE 193
Query: 528 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 707
LPLFV AV A G +LL ++ S++
Sbjct: 194 ILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISN 253
Query: 708 GGGDPXYINIYFDF 749
GG + N+++ F
Sbjct: 254 YGGALMWENLFWYF 267
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.4 bits (100), Expect = 0.004
Identities = 41/165 (24%), Positives = 49/165 (29%)
Frame = +2
Query: 194 NL*YYCNSACXXXXXXXXXXXXXWRXWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYII 373
NL YC +C KL P NK +KIL TPL Y
Sbjct: 37 NLQRYCYCSCLRYNFLYSNTYYNSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTT 96
Query: 374 NFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXT 553
N C K C + +NSLP Y T R +F T
Sbjct: 97 NSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYA 156
Query: 554 XXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKY 688
CM +YS + S+YNI K KY
Sbjct: 157 RYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPKPKY 201
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 41.9 bits (94), Expect = 0.020
Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +1
Query: 724 FISTFILIFWT-SEVIFXFTRIWY-XSHIIHRKRKK-ELW 834
F+STFILIFWT S + F FT IWY S+ K KK LW
Sbjct: 23 FMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLW 62
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 41.9 bits (94), Expect = 0.020
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 573 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP---XYINIYF 743
DQ+ LF ++ IT AG IT+LL+DRN N FF GG P Y+ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 744 DFLDI*SYI--XFYQDLVXF 797
D+ I FYQDL F
Sbjct: 72 GHTDVLFLILFWFYQDLDLF 91
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 41.9 bits (94), Expect = 0.020
Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 1/150 (0%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 452
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 453 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 632
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSS--TLTGVNFVMTITKMKKVPYLKMPLFVWGFFTTAILMIIA 196
Query: 633 XXXXAGAITILLTDRNLNTSFFDPAGGGDP 722
+ +R T FFD A GG P
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSP 226
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 40.7 bits (91), Expect = 0.046
Identities = 40/192 (20%), Positives = 63/192 (32%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
+R +L P + + YN I T H L+P +L A D+ FPR
Sbjct: 64 MRTQLAVPENDLVGQDFYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARDLPFPR 122
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 506
++ + G +YPPL+ G + D + + IS
Sbjct: 123 LSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIGFIEIS 182
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
+ S ++P+F A+ I A A +L +R+
Sbjct: 183 AIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFG 242
Query: 687 TSFFDPAGGGDP 722
FF GGDP
Sbjct: 243 WPFFTAERGGDP 254
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 40.7 bits (91), Expect = 0.046
Identities = 30/147 (20%), Positives = 53/147 (36%)
Frame = +3
Query: 282 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 461
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 462 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 641
D+ + L ++S + +PL+ V +
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 642 XAGAITILLTDRNLNTSFFDPAGGGDP 722
+ +R + FFDP GGDP
Sbjct: 244 LIAGDLLFEMERGFDWPFFDPERGGDP 270
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 39.9 bits (89), Expect = 0.081
Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 5/188 (2%)
Frame = +3
Query: 162 GNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 341
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 342 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 506
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 507 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 686
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 687 TSFFDPAG 710
TSFF P+G
Sbjct: 254 TSFFIPSG 261
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 39.5 bits (88), Expect = 0.11
Identities = 39/185 (21%), Positives = 65/185 (35%), Gaps = 2/185 (1%)
Frame = +3
Query: 150 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 329
R EL + G+ + YN V+ H N LVPL +GA D+AFPR+
Sbjct: 48 RLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGADDLAFPRL 106
Query: 330 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGI 503
N + + G T+Y PL+ + I G + +L +
Sbjct: 107 NALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIPGEGLGATSVVLALIMFTA 166
Query: 504 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 683
+ +P+F ++ +T + A+ IL +D L
Sbjct: 167 AVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAALMILASDHIL 226
Query: 684 NTSFF 698
T++F
Sbjct: 227 GTTYF 231
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 37.5 bits (83), Expect = 0.43
Identities = 32/147 (21%), Positives = 53/147 (36%)
Frame = +3
Query: 282 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 461
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 462 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 641
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 642 XAGAITILLTDRNLNTSFFDPAGGGDP 722
A +L +R + FF GGDP
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDP 313
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 37.5 bits (83), Expect = 0.43
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 147 IRAELGNPGSLI--GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 320
IR EL +P S G Y +VTAH N L+P +G+ D+A+
Sbjct: 85 IRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAY 144
Query: 321 PRINNIRF 344
PR+N+I F
Sbjct: 145 PRLNSIGF 152
Score = 35.9 bits (79), Expect = 1.3
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +3
Query: 411 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 581
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 582 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 722
P ++ +T A+ ++ DR+ T+FF+ A GGDP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDP 389
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.57
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +3
Query: 456 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 635
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 636 XXXAGAITILLTDRNLNT 689
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
Score = 33.9 bits (74), Expect = 5.3
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 147 IRAELGNPGSLIGAXQIYNTIVTAHA 224
IR EL GS++ + QIYNT+VT+HA
Sbjct: 21 IRLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 35.9 bits (79), Expect = 1.3
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 1/157 (0%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 455
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 456 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 635
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 636 XXXAGAITILLTDRNLNTSFFDPAGGGD-PXYINIYF 743
A+ +L DR L T FF GG+ Y N+++
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFW 299
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,375,284
Number of Sequences: 1657284
Number of extensions: 9301148
Number of successful extensions: 18628
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 17020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18376
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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