Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_F04
         (840 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   1.2  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    25   3.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.8  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   6.6  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    24   6.6  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.7  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -3

Query: 310 FPSVNPGISWAPLRTITRAKTERLASTIHPR 218
           +P +  G + APLR+I   + +++A+++HPR
Sbjct: 408 WPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +3

Query: 21  YREFLRFDQLGDEWKGYVLRVAGGNDKQGFPM-KQGVLTNSRVRLLMSKGHSCYRPRRDG 197
           YR+  RF +    W+   LR  G   K GF + +  V    R R  + KG +  +P+  G
Sbjct: 30  YRQMTRFHRAPRPWRPTRLRRLGYKAKTGFSIFRIRVRCGGRKR-PVHKGCTYGKPKSHG 88

Query: 198 ERKRKSVR 221
             + K  R
Sbjct: 89  VNQLKPYR 96


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 252 RPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSEDEHGCLS 130
           +P+D+R+  +  L  VF   +GA+ ++    T ED  G  S
Sbjct: 856 KPKDFRKHSLLPLNNVFDRIKGALPHLKKSPTKEDATGGFS 896


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 257 SCYCAQGCPGN 289
           +CYC   CPGN
Sbjct: 73  TCYCEGHCPGN 83


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 118 FIGNPCLSLPPATRS 74
           F GNPCL  PP  ++
Sbjct: 55  FAGNPCLKGPPVPKN 69


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 327 LDGGVHFHQSIQEFPGH 277
           +DGG++   S++ FPG+
Sbjct: 167 VDGGLNIPHSVKRFPGY 183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,344
Number of Sequences: 2352
Number of extensions: 14132
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)