Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_F03
         (1115 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0776 + 7533790-7533984,7534234-7534419,7534542-7534631,753...    31   2.2  

>08_01_0776 +
           7533790-7533984,7534234-7534419,7534542-7534631,
           7535284-7535368,7535759-7535925,7536250-7536438,
           7537183-7537296,7537391-7537510,7537590-7537712,
           7538217-7538315,7538735-7538791,7539272-7539318,
           7539391-7539534,7540028-7540205,7540663-7540743,
           7540926-7541009,7541416-7541616
          Length = 719

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 275 GGXEICFTYGTQEALKXFIVVGRCH 201
           G   ICFTYGT  A++    VG+C+
Sbjct: 541 GSWGICFTYGTWFAIEGLSAVGQCY 565


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,361,095
Number of Sequences: 37544
Number of extensions: 126057
Number of successful extensions: 166
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3363032448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)