Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_F03
         (1115 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106940-1|AAI06941.1|  784|Homo sapiens zinc finger, FYVE domai...    40   0.012
AY009133-1|AAG33246.1|  784|Homo sapiens FYVE-finger-containing ...    40   0.012
AB209673-1|BAD92910.1|  767|Homo sapiens FYVE-finger-containing ...    40   0.012
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.      39   0.038
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote...    39   0.038
BC017837-1|AAH17837.1|  311|Homo sapiens Unknown (protein for IM...    39   0.038

>BC106940-1|AAI06941.1|  784|Homo sapiens zinc finger, FYVE domain
           containing 20 protein.
          Length = 784

 Score = 40.3 bits (90), Expect = 0.012
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 201 MATANDD-EXLEGFLCPICKADLXSASQLTNHFESLHQXD 317
           MA+ +D  E  EGFLCP+C  DL S  QL +H+E  H  +
Sbjct: 1   MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGE 40


>AY009133-1|AAG33246.1|  784|Homo sapiens FYVE-finger-containing
           Rab5 effector protein Rabenosyn-5 protein.
          Length = 784

 Score = 40.3 bits (90), Expect = 0.012
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 201 MATANDD-EXLEGFLCPICKADLXSASQLTNHFESLHQXD 317
           MA+ +D  E  EGFLCP+C  DL S  QL +H+E  H  +
Sbjct: 1   MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGE 40


>AB209673-1|BAD92910.1|  767|Homo sapiens FYVE-finger-containing
           Rab5 effector protein rabenosyn-5 variant protein.
          Length = 767

 Score = 40.3 bits (90), Expect = 0.012
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 201 MATANDD-EXLEGFLCPICKADLXSASQLTNHFESLHQXD 317
           MA+ +D  E  EGFLCP+C  DL S  QL +H+E  H  +
Sbjct: 13  MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGE 52


>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
          Length = 1411

 Score = 38.7 bits (86), Expect = 0.038
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 213 NDDEXLEGFLCPICKADLXSASQLTNHFESLH 308
           N++   EGF+CP C   L SA +L  H+E++H
Sbjct: 33  NNESSSEGFICPQCMKSLGSADELFKHYEAVH 64


>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
           protein.
          Length = 1410

 Score = 38.7 bits (86), Expect = 0.038
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 213 NDDEXLEGFLCPICKADLXSASQLTNHFESLH 308
           N++   EGF+CP C   L SA +L  H+E++H
Sbjct: 33  NNESSSEGFICPQCMKSLGSADELFKHYEAVH 64


>BC017837-1|AAH17837.1|  311|Homo sapiens Unknown (protein for
           IMAGE:4270936) protein.
          Length = 311

 Score = 38.7 bits (86), Expect = 0.038
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 213 NDDEXLEGFLCPICKADLXSASQLTNHFESLH 308
           N++   EGF+CP C   L SA +L  H+E++H
Sbjct: 33  NNESSSEGFICPQCMKSLGSADELFKHYEAVH 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,351,785
Number of Sequences: 237096
Number of extensions: 732828
Number of successful extensions: 1418
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15479331280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)