Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_F03
         (1115 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr...    42   0.001
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr...    42   0.001
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.       42   0.001
AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical ...    31   1.9  
AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical ...    29   4.5  

>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
           protein T10G3.5b protein.
          Length = 1203

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 210 ANDDEXLEGFLCPICKADLXSASQLTNHFESLH 308
           + +D+ +EGFLCP+C  +L    +LT HFE  H
Sbjct: 39  SENDQEIEGFLCPMCMVELGGPDELTVHFEKEH 71


>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
           protein T10G3.5a protein.
          Length = 1205

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 210 ANDDEXLEGFLCPICKADLXSASQLTNHFESLH 308
           + +D+ +EGFLCP+C  +L    +LT HFE  H
Sbjct: 39  SENDQEIEGFLCPMCMVELGGPDELTVHFEKEH 71


>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
          Length = 1205

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 210 ANDDEXLEGFLCPICKADLXSASQLTNHFESLH 308
           + +D+ +EGFLCP+C  +L    +LT HFE  H
Sbjct: 39  SENDQEIEGFLCPMCMVELGGPDELTVHFEKEH 71


>AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.10 protein.
          Length = 976

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 243 CPICKADLXSASQLTNHFESLH 308
           CPIC++ +  AS+  NH  S+H
Sbjct: 791 CPICESRIRGASEAANHLRSVH 812


>AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.3 protein.
          Length = 563

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 213 NDDEXLEGFLCPICKADLXSASQLTNHFESLH 308
           ++D   +GF+CP C  D     +L  H E+ H
Sbjct: 13  HNDVVRQGFICPFCMEDFGEYERLICHVENDH 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,459,988
Number of Sequences: 27780
Number of extensions: 99281
Number of successful extensions: 191
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3005123904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)