Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_F01
(869 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 3.1
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 3.1
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 4.1
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 4.1
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 23 4.1
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 23 4.1
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 23 4.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 7.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 7.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 7.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 7.2
AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochr... 22 7.2
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.0 bits (47), Expect = 3.1
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +3
Query: 159 HNSHAIPQARKKTDKNAGVSTG-RFTGEAYHFVSLVPING-HLFELDGLKPYP-MDHGPW 329
HN A+ A + +A ++ +F +A V + P+N G +P P + PW
Sbjct: 77 HNGAAVSAASSVSAASASMAVAAQFYHQAASAV-VDPLNSCSQPAAPGGQPIPDIPRYPW 135
Query: 330 AADEDWTDKFRRVMAERLG--RDAGEQVH 410
+ DW F RV+ G R G Q +
Sbjct: 136 MSITDWMSPFDRVVCGPNGCPRRRGRQTY 164
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.0 bits (47), Expect = 3.1
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +3
Query: 159 HNSHAIPQARKKTDKNAGVSTG-RFTGEAYHFVSLVPING-HLFELDGLKPYP-MDHGPW 329
HN A+ A + +A ++ +F +A V + P+N G +P P + PW
Sbjct: 136 HNGAAVSAASSVSAASASMAVAAQFYHQAASAV-VDPLNSCSQPAAPGGQPIPDIPRYPW 194
Query: 330 AADEDWTDKFRRVMAERLG--RDAGEQVH 410
+ DW F RV+ G R G Q +
Sbjct: 195 MSITDWMSPFDRVVCGPNGCPRRRGRQTY 223
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 636 SEETILTALQSSQLRTYDIDYTLPITIEIGAMDRPHQ 746
S T TA+ S+ + ++ T+P G+M P+Q
Sbjct: 251 SSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPNQ 287
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 636 SEETILTALQSSQLRTYDIDYTLPITIEIGAMDRPHQ 746
S T TA+ S+ + ++ T+P G+M P+Q
Sbjct: 199 SSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPNQ 235
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 636 SEETILTALQSSQLRTYDIDYTLPITIEIGAMDRPHQ 746
S T TA+ S+ + ++ T+P G+M P+Q
Sbjct: 382 SSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPNQ 418
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 22.6 bits (46), Expect = 4.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 159 HNSHAIPQARKKTDKNAGVSTG-RFTGEAYHFVSLVPING-HLFELDGLKPYP-MDHGPW 329
HN A+ A + +A ++ +F +A V + P+N G +P P + PW
Sbjct: 77 HNGAAVSAASSVSAASASMAVAAQFYHQAASAV-VDPLNSCSQPAAPGGQPIPDIPRYPW 135
Query: 330 AADEDWTDKFRRVM 371
+ DW F RV+
Sbjct: 136 MSITDWMSPFDRVV 149
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 22.6 bits (46), Expect = 4.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 159 HNSHAIPQARKKTDKNAGVSTG-RFTGEAYHFVSLVPING-HLFELDGLKPYP-MDHGPW 329
HN A+ A + +A ++ +F +A V + P+N G +P P + PW
Sbjct: 136 HNGAAVSAASSVSAASASMAVAAQFYHQAASAV-VDPLNSCSQPAAPGGQPIPDIPRYPW 194
Query: 330 AADEDWTDKFRRVM 371
+ DW F RV+
Sbjct: 195 MSITDWMSPFDRVV 208
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 248 MVCFTCKS 225
+VCFTCKS
Sbjct: 959 LVCFTCKS 966
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 248 MVCFTCKS 225
+VCFTCKS
Sbjct: 959 LVCFTCKS 966
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 248 MVCFTCKS 225
+VCFTCKS
Sbjct: 959 LVCFTCKS 966
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 248 MVCFTCKS 225
+VCFTCKS
Sbjct: 959 LVCFTCKS 966
>AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 126
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +3
Query: 648 ILTALQSSQLRTYDIDYTLPITIEIG 725
I+T + + +++ DYTLP+ +G
Sbjct: 64 IITRVINEEVKLASGDYTLPVGTTVG 89
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,131
Number of Sequences: 336
Number of extensions: 4130
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -