Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E22
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0129 + 17520753-17520842,17521651-17521741,17521887-175220...   168   6e-42
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497...    28   8.4  

>03_04_0129 +
           17520753-17520842,17521651-17521741,17521887-17522070,
           17522149-17522224
          Length = 146

 Score =  168 bits (408), Expect = 6e-42
 Identities = 74/137 (54%), Positives = 103/137 (75%)
 Frame = +2

Query: 80  MAMMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRC 259
           MA   + TVKDV   + VK  +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R 
Sbjct: 1   MADSTARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRA 60

Query: 260 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 439
           A+I R IY+R  +GV    KI+GGR+RNG  P HFC+SSG+I+R  LQ L+ + +++   
Sbjct: 61  ASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDP 120

Query: 440 DGGRILTTQGRRDLDRI 490
            GGR++T+QGRRDLD++
Sbjct: 121 KGGRLITSQGRRDLDQV 137


>07_03_0493 +
           18747427-18748356,18748594-18748697,18749586-18749795,
           18749992-18750597,18750819-18751095,18751163-18751310,
           18751957-18752044,18752167-18752284
          Length = 826

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -2

Query: 332 AHQRSW*QSLLQQVSECKYDEGWQHNAHRTNQGHTEPAL*SELSLQDPCAQV 177
           A QR   Q  L  VS     EGWQH++        +  L  E+ ++   AQV
Sbjct: 671 ADQRVSAQCSLAPVSHLHQQEGWQHSSFEHQHHENQNFLEMEVRVRSEMAQV 722


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,471,267
Number of Sequences: 37544
Number of extensions: 300328
Number of successful extensions: 799
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)