Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E20
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0202 - 1638978-1639571                                           40   0.002
02_01_0158 - 1103461-1104186                                           39   0.006
01_06_1842 - 40278875-40280131                                         30   2.1  
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929...    30   2.8  
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993     29   6.5  

>08_01_0202 - 1638978-1639571
          Length = 197

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +2

Query: 299 GKIKTFCREKGHGFVKPEKGGEDIFLHISDIEGE 400
           G +K F   KG GF+ P+ GGED+F+H S ++ +
Sbjct: 8   GTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSD 41


>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 299 GKIKTFCREKGHGFVKPEKGGEDIFLHISDIEGE 400
           G +K F   KG GF+ P+ G ED+F+H S I+ +
Sbjct: 9   GTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKAD 42


>01_06_1842 - 40278875-40280131
          Length = 418

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 434 STLPNPT*VRKISSCPCAHNSSHSGETRQVGRTTSV 541
           +T P P   RK+SS PC+ ++S  GET       S+
Sbjct: 230 ATAPGPAPARKVSSAPCSRSNSR-GETSAAAPPPSI 264


>10_05_0114 +
           9294747-9294788,9294883-9294996,9295066-9295173,
           9295774-9296145,9296584-9296652,9296754-9296825,
           9297070-9297198,9297690-9297770,9298622-9298807,
           9299135-9299860
          Length = 632

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 426 LHHQXRGTYSPSISDIWRNISSPPFSGFTNP 334
           L H+ R  + PSI+   RN++S P S   +P
Sbjct: 507 LQHEARSVFQPSIASSIRNLTSSPQSSLDSP 537


>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
          Length = 1125

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +3

Query: 435 RLCPIPPKFEKFQAVHVRIIHLTPEKHVKWDEPPL*QLRTLDM 563
           R+  +P + +K + + +  +  T  + + W+   L QLRTLD+
Sbjct: 712 RITKLPQEIQKLKQLEILYVRSTGIEELPWEIGELKQLRTLDV 754


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,664,877
Number of Sequences: 37544
Number of extensions: 359318
Number of successful extensions: 640
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)