Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_E20
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060441-1|AAL25480.1| 143|Drosophila melanogaster LD47312p pro... 77 4e-14
AE014296-2798|AAN11740.1| 143|Drosophila melanogaster CG9705-PB... 77 4e-14
AE014296-2797|AAF49414.1| 143|Drosophila melanogaster CG9705-PA... 77 4e-14
AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p pro... 35 0.13
AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding ... 35 0.13
AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA... 35 0.13
U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein ... 30 3.7
U04853-1|AAG33250.1| 272|Drosophila melanogaster trypsin-lambda... 30 3.7
AY070589-1|AAL48060.1| 272|Drosophila melanogaster RE69176p pro... 30 3.7
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 30 3.7
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 30 3.7
AE013599-1272|AAF58665.1| 272|Drosophila melanogaster CG12350-P... 30 3.7
>AY060441-1|AAL25480.1| 143|Drosophila melanogaster LD47312p
protein.
Length = 143
Score = 76.6 bits (180), Expect = 4e-14
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 408 PXPGDEVIYRLCPIPPKFEKFQAVHVRIIHLTPEKHVKWDEP 533
P PGDEV YRLC IPPK+EK QAVHV+I HLTPE H KW+EP
Sbjct: 93 PMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
Score = 72.9 bits (171), Expect = 5e-13
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +2
Query: 284 NPLETGKIKTFCREKGHGFVKPEKGGEDIFLHISDIEGEYVPL 412
NP+ TG +K+F R KGHGF+ P GGED+F H+SDIEGEYVP+
Sbjct: 52 NPVVTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDIEGEYVPM 94
Score = 44.0 bits (99), Expect = 3e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1
Query: 205 NSHLQLPSPIITRRNRTASTSERAL 279
N+ LQLPSPIITRR RTASTS RAL
Sbjct: 26 NASLQLPSPIITRRTRTASTSARAL 50
>AE014296-2798|AAN11740.1| 143|Drosophila melanogaster CG9705-PB,
isoform B protein.
Length = 143
Score = 76.6 bits (180), Expect = 4e-14
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 408 PXPGDEVIYRLCPIPPKFEKFQAVHVRIIHLTPEKHVKWDEP 533
P PGDEV YRLC IPPK+EK QAVHV+I HLTPE H KW+EP
Sbjct: 93 PMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
Score = 72.9 bits (171), Expect = 5e-13
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +2
Query: 284 NPLETGKIKTFCREKGHGFVKPEKGGEDIFLHISDIEGEYVPL 412
NP+ TG +K+F R KGHGF+ P GGED+F H+SDIEGEYVP+
Sbjct: 52 NPVVTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDIEGEYVPM 94
Score = 44.0 bits (99), Expect = 3e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1
Query: 205 NSHLQLPSPIITRRNRTASTSERAL 279
N+ LQLPSPIITRR RTASTS RAL
Sbjct: 26 NASLQLPSPIITRRTRTASTSARAL 50
>AE014296-2797|AAF49414.1| 143|Drosophila melanogaster CG9705-PA,
isoform A protein.
Length = 143
Score = 76.6 bits (180), Expect = 4e-14
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 408 PXPGDEVIYRLCPIPPKFEKFQAVHVRIIHLTPEKHVKWDEP 533
P PGDEV YRLC IPPK+EK QAVHV+I HLTPE H KW+EP
Sbjct: 93 PMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
Score = 72.9 bits (171), Expect = 5e-13
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +2
Query: 284 NPLETGKIKTFCREKGHGFVKPEKGGEDIFLHISDIEGEYVPL 412
NP+ TG +K+F R KGHGF+ P GGED+F H+SDIEGEYVP+
Sbjct: 52 NPVVTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDIEGEYVPM 94
Score = 44.0 bits (99), Expect = 3e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1
Query: 205 NSHLQLPSPIITRRNRTASTSERAL 279
N+ LQLPSPIITRR RTASTS RAL
Sbjct: 26 NASLQLPSPIITRRTRTASTSARAL 50
>AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p
protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 299 GKIKTFCREKGHGFVKPEKGGEDIFLHISDIE 394
GK K F KG GF+ P GG+++F+H S I+
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQ 72
>AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding
protein LIN-28 protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 299 GKIKTFCREKGHGFVKPEKGGEDIFLHISDIE 394
GK K F KG GF+ P GG+++F+H S I+
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQ 72
>AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA
protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 299 GKIKTFCREKGHGFVKPEKGGEDIFLHISDIE 394
GK K F KG GF+ P GG+++F+H S I+
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQ 72
>U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein
protein.
Length = 359
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 296 TGKIKTFCREKGHGFVKPEKGGEDIFLHISDI 391
TG +K F + G+GF+ ED+F+H S I
Sbjct: 64 TGTVKWFNVKSGYGFINRNDTREDVFVHQSAI 95
>U04853-1|AAG33250.1| 272|Drosophila melanogaster trypsin-lambda
protein.
Length = 272
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 82 LRVK*VLFLPTYYLF*NDYQSNLLIMSNDYGFNSDDSP 195
L V+ ++ P Y NDY + +LI+ D+ FN P
Sbjct: 106 LEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQP 143
>AY070589-1|AAL48060.1| 272|Drosophila melanogaster RE69176p
protein.
Length = 272
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 82 LRVK*VLFLPTYYLF*NDYQSNLLIMSNDYGFNSDDSP 195
L V+ ++ P Y NDY + +LI+ D+ FN P
Sbjct: 106 LEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQP 143
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 296 TGKIKTFCREKGHGFVKPEKGGEDIFLHISDI 391
TG +K F + G+GF+ ED+F+H S I
Sbjct: 63 TGTVKWFNVKSGYGFINRNDTREDVFVHQSAI 94
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 296 TGKIKTFCREKGHGFVKPEKGGEDIFLHISDI 391
TG +K F + G+GF+ ED+F+H S I
Sbjct: 63 TGTVKWFNVKSGYGFINRNDTREDVFVHQSAI 94
>AE013599-1272|AAF58665.1| 272|Drosophila melanogaster CG12350-PA
protein.
Length = 272
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 82 LRVK*VLFLPTYYLF*NDYQSNLLIMSNDYGFNSDDSP 195
L V+ ++ P Y NDY + +LI+ D+ FN P
Sbjct: 106 LEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQP 143
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,143,849
Number of Sequences: 53049
Number of extensions: 623428
Number of successful extensions: 1053
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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