Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E19
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    86   1e-18
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   5.4  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 86.2 bits (204), Expect = 1e-18
 Identities = 38/87 (43%), Positives = 53/87 (60%)
 Frame = +2

Query: 191 NLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASE 370
           +   +L  AGD+LVV+DF ATWCGPCK+I PKL+E   +                  A++
Sbjct: 10  DFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECEELAAQ 69

Query: 371 YNINSMPTFVFVKNGKKLDEFSGANVD 451
           YNI SMPTF+F+K  + + +FSGAN +
Sbjct: 70  YNIASMPTFLFIKRKEVVGQFSGANAE 96


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 186 RRT*RQGWRKPETSSS*STSWRPGADRAR*SGLNW 290
           R+T   GW+    SS  +    PGA RA    L+W
Sbjct: 208 RKTCGTGWKYRSISSLHAPPSHPGAHRAAEPRLDW 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,179
Number of Sequences: 2352
Number of extensions: 10195
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)