Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E16
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL354733-7|CAI16017.1|  341|Homo sapiens chromosome 9 open readi...   152   1e-36
AL354733-5|CAI16015.1|  200|Homo sapiens chromosome 9 open readi...    70   1e-11
AK090882-1|BAC03538.1|  200|Homo sapiens protein ( Homo sapiens ...    70   1e-11
AL354733-6|CAI16016.1|   60|Homo sapiens chromosome 9 open readi...    67   7e-11
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    31   4.1  
X87894-1|CAA61145.1|  110|Homo sapiens Immunoglobulin M light ch...    31   5.5  
BC111487-1|AAI11488.1|  882|Homo sapiens TTC7A protein protein.        31   5.5  
U87151-1|AAB47543.1|  100|Homo sapiens immunoglobulin light chai...    30   9.5  
AF194542-1|AAF20400.1|  110|Homo sapiens immunoglobulin lambda l...    30   9.5  

>AL354733-7|CAI16017.1|  341|Homo sapiens chromosome 9 open reading
           frame 64 protein.
          Length = 341

 Score =  152 bits (369), Expect = 1e-36
 Identities = 76/199 (38%), Positives = 123/199 (61%), Gaps = 6/199 (3%)
 Frame = +2

Query: 206 GVLLPAKSGEYIARYAKHVQIHEEGLDKACKEILTSMSTSKLEIPD--AGTGIHPNVEHP 379
           G+L P +S ++IA  ++ V I   G+ +  + +L   +  +L +    A   ++P     
Sbjct: 3   GLLNPRESSKFIAENSRDVFIDSGGVRRVAELLLAKAAGPELRVEGWKALHELNPRAADE 62

Query: 380 RAVDWVFVADTLNFCFWSYSGARKWTVG----GHSGYYALEAALDRAIKEGYDITNPEYY 547
            AV+WVFV DTLNF FWS     K  V      +SGY++L AA++RA+ EG  IT+  YY
Sbjct: 63  AAVNWVFVTDTLNFSFWSEQDEHKCVVRYRGKTYSGYWSLCAAVNRALDEGIPITSASYY 122

Query: 548 SKITTEQLEMIMRGDNEAKIPLFKERISVLHETGAILLEKYNGTFTTCLKEANKSALKLL 727
           + +T +Q+  I+R D +  +PL +ER  +L+ETG ILLEK+ G+F  C++E+  SA KL+
Sbjct: 123 ATVTLDQVRNILRSDTDVSMPLVEERHRILNETGKILLEKFGGSFLNCVRESENSAQKLM 182

Query: 728 EIIVNNFPSFRDEAVYKGQ 784
            ++V +FPS+RD  +++G+
Sbjct: 183 HLVVESFPSYRDVTLFEGK 201


>AL354733-5|CAI16015.1|  200|Homo sapiens chromosome 9 open reading
           frame 64 protein.
          Length = 200

 Score = 70.1 bits (164), Expect = 1e-11
 Identities = 28/60 (46%), Positives = 46/60 (76%)
 Frame = +2

Query: 605 IPLFKERISVLHETGAILLEKYNGTFTTCLKEANKSALKLLEIIVNNFPSFRDEAVYKGQ 784
           +PL +ER  +L+ETG ILLEK+ G+F  C++E+  SA KL+ ++V +FPS+RD  +++G+
Sbjct: 1   MPLVEERHRILNETGKILLEKFGGSFLNCVRESENSAQKLMHLVVESFPSYRDVTLFEGK 60


>AK090882-1|BAC03538.1|  200|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33563 fis, clone BRAMY2010068. ).
          Length = 200

 Score = 70.1 bits (164), Expect = 1e-11
 Identities = 28/60 (46%), Positives = 46/60 (76%)
 Frame = +2

Query: 605 IPLFKERISVLHETGAILLEKYNGTFTTCLKEANKSALKLLEIIVNNFPSFRDEAVYKGQ 784
           +PL +ER  +L+ETG ILLEK+ G+F  C++E+  SA KL+ ++V +FPS+RD  +++G+
Sbjct: 1   MPLVEERHRILNETGKILLEKFGGSFLNCVRESENSAQKLMHLVVESFPSYRDVTLFEGK 60


>AL354733-6|CAI16016.1|   60|Homo sapiens chromosome 9 open reading
           frame 64 protein.
          Length = 60

 Score = 67.3 bits (157), Expect = 7e-11
 Identities = 27/58 (46%), Positives = 44/58 (75%)
 Frame = +2

Query: 605 IPLFKERISVLHETGAILLEKYNGTFTTCLKEANKSALKLLEIIVNNFPSFRDEAVYK 778
           +PL +ER  +L+ETG ILLEK+ G+F  C++E+  SA KL+ ++V +FPS+RD  +++
Sbjct: 1   MPLVEERHRILNETGKILLEKFGGSFLNCVRESENSAQKLMHLVVESFPSYRDVTLFE 58


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 391 VHSPWVFNIRMYTCSCIRDFQFTCRH*REYLFTCFI*SFFMYLYM 257
           VH      + MYTC  +   ++TC H   +++TC     F+Y Y+
Sbjct: 160 VHMHAYVCVHMYTCVHMCIHKYTCMHMCIHMYTCIHRCIFIYTYV 204


>X87894-1|CAA61145.1|  110|Homo sapiens Immunoglobulin M light chain
           protein.
          Length = 110

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 16/70 (22%), Positives = 33/70 (47%)
 Frame = +2

Query: 257 HVQIHEEGLDKACKEILTSMSTSKLEIPDAGTGIHPNVEHPRAVDWVFVADTLNFCFWSY 436
           +V  ++   DKA K ++ +++     +PD  +G   +      +  +   D  ++   SY
Sbjct: 34  YVSWYQHHTDKAPKLMIYAVNKRPSGVPDRFSGSKSDNTASLTISGLQAEDEADYYCCSY 93

Query: 437 SGARKWTVGG 466
           +G+R W  GG
Sbjct: 94  AGSRTWVFGG 103


>BC111487-1|AAI11488.1|  882|Homo sapiens TTC7A protein protein.
          Length = 882

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 26/105 (24%), Positives = 40/105 (38%)
 Frame = +2

Query: 461 GGHSGYYALEAALDRAIKEGYDITNPEYYSKITTEQLEMIMRGDNEAKIPLFKERISVLH 640
           G H  Y  +E+ L+R   EG+    PE   ++ T  L M   G N    P          
Sbjct: 5   GAHGSYLKVESELERCRAEGHWDRMPELVRQLQT--LSMPGGGGNRRGSPSAAFTFPDTD 62

Query: 641 ETGAILLEKYNGTFTTCLKEANKSALKLLEIIVNNFPSFRDEAVY 775
           + G +LL +       CLKE +      + ++  N P   +   Y
Sbjct: 63  DFGKLLLAE--ALLEQCLKENHAKIKDSMPLLEKNEPKMSEAKNY 105


>U87151-1|AAB47543.1|  100|Homo sapiens immunoglobulin light chain V
           region protein.
          Length = 100

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 17/71 (23%), Positives = 32/71 (45%)
 Frame = +2

Query: 254 KHVQIHEEGLDKACKEILTSMSTSKLEIPDAGTGIHPNVEHPRAVDWVFVADTLNFCFWS 433
           K+V  ++   DKA K ++  ++     +PD  +G   +      V  +   D  ++   S
Sbjct: 23  KYVSWYQHHPDKAPKLMIYEVNKRPSGVPDRFSGSKSDNTASLTVSGLQAEDEADYYCSS 82

Query: 434 YSGARKWTVGG 466
           Y+G+  W  GG
Sbjct: 83  YAGSNNWVFGG 93


>AF194542-1|AAF20400.1|  110|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 110

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = +2

Query: 257 HVQIHEEGLDKACKEILTSMSTSKLEIPDAGTGIHPNVEHPRAVDWVFVADTLNFCFWSY 436
           +V  +++   KA K ++  +S     +PD  +G  P       V  +   D  ++   SY
Sbjct: 34  YVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKPGNTASLTVSGLQAEDEADYYCSSY 93

Query: 437 SGARKWTVGG 466
           +G+  W  GG
Sbjct: 94  AGSNNWVFGG 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,809,563
Number of Sequences: 237096
Number of extensions: 2605106
Number of successful extensions: 10007
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10006
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)