Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E15
         (1135 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.3  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   9.5  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   9.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 14/48 (29%), Positives = 16/48 (33%)
 Frame = +1

Query: 565 PPXPHXXPPXXXPPPPSXXXLGXXXXXSPXXTXPXAXXPRPGLLAGXG 708
           P  P+  PP   PPPP            P      +  P P LL   G
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621



 Score = 25.0 bits (52), Expect = 4.1
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +1

Query: 529 PRXXARXPXXXKPPXPHXXPPXXXPPPP 612
           P      P    PP P   PP   PP P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSP 597


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 615 GGGXGXXXGGAXVGXXGLRXXGXPG 541
           GGG G   GG   G  GL   G  G
Sbjct: 556 GGGGGGGGGGGVGGGIGLSLGGAAG 580


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 615 GGGXGXXXGGAXVGXXGLRXXGXPG 541
           GGG G   GG   G  GL   G  G
Sbjct: 557 GGGGGGGGGGGVGGGIGLSLGGAAG 581


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,153
Number of Sequences: 2352
Number of extensions: 6244
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127120317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)