Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_E11
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 313 1e-85
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 313 1e-85
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 309 2e-84
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 297 5e-81
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 223 1e-58
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 219 2e-57
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 175 3e-44
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 171 4e-43
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 149 3e-36
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.47
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.3
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 7.7
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 313 bits (768), Expect = 1e-85
Identities = 144/196 (73%), Positives = 167/196 (85%)
Frame = +1
Query: 205 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 384
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 385 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 564
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 565 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 744
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 745 QRVIL*SLSLQHSEKI 792
RV +S QHS I
Sbjct: 186 LRVHTVVISTQHSPDI 201
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 313 bits (768), Expect = 1e-85
Identities = 144/196 (73%), Positives = 167/196 (85%)
Frame = +1
Query: 205 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 384
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 385 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 564
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 565 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 744
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 745 QRVIL*SLSLQHSEKI 792
RV +S QHS I
Sbjct: 186 LRVHTVVISTQHSPDI 201
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 309 bits (758), Expect = 2e-84
Identities = 144/196 (73%), Positives = 165/196 (84%)
Frame = +1
Query: 205 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 384
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 385 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 564
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 565 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 744
MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVP 185
Query: 745 QRVIL*SLSLQHSEKI 792
RV +S QHS I
Sbjct: 186 LRVHTVVISTQHSPDI 201
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 297 bits (730), Expect = 5e-81
Identities = 137/198 (69%), Positives = 165/198 (83%)
Frame = +1
Query: 199 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 378
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 379 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 558
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 559 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAT 738
G+MFGYATDETEE MPLT++L+HK+N ++ +LRRNG W RPDSK+QVT EY GAT
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGAT 182
Query: 739 VPQRVIL*SLSLQHSEKI 792
+P RV +S QHS +
Sbjct: 183 IPLRVHTVVVSTQHSPDV 200
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 223 bits (546), Expect = 1e-58
Identities = 103/150 (68%), Positives = 124/150 (82%)
Frame = +1
Query: 343 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 522
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 523 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 702
+++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120
Query: 703 VTCEYVFAGGATVPQRVIL*SLSLQHSEKI 792
VT EY GGA VP RV +S QHS I
Sbjct: 121 VTIEYASEGGACVPLRVHTVVISTQHSPDI 150
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 219 bits (536), Expect = 2e-57
Identities = 103/150 (68%), Positives = 122/150 (81%)
Frame = +1
Query: 343 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 522
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 523 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 702
+++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQ 120
Query: 703 VTCEYVFAGGATVPQRVIL*SLSLQHSEKI 792
VT EY GGA VP RV +S QHS I
Sbjct: 121 VTIEYSSEGGACVPLRVHTVVISTQHSPDI 150
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 175 bits (426), Expect = 3e-44
Identities = 80/123 (65%), Positives = 98/123 (79%)
Frame = +1
Query: 424 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 603
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 604 PLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVIL*SLSLQHS 783
PLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RV +S QHS
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVISTQHS 139
Query: 784 EKI 792
I
Sbjct: 140 PDI 142
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 171 bits (417), Expect = 4e-43
Identities = 80/128 (62%), Positives = 100/128 (78%), Gaps = 3/128 (2%)
Frame = +1
Query: 418 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 588
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 589 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVIL*SL 768
TEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RV +
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVI 152
Query: 769 SLQHSEKI 792
S QHS I
Sbjct: 153 STQHSPDI 160
Score = 83.0 bits (196), Expect = 3e-16
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +1
Query: 205 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 384
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 385 DYQKVVRETVKHIGYDDSSKGFDYKT 462
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 149 bits (360), Expect = 3e-36
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = +1
Query: 205 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 384
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 385 DYQKVVRETVKHIGYDDSSKG 447
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +2
Query: 383 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 550
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 551 ETRA*CSVMQQMRQKNAC 604
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +1
Query: 205 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 321
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 205 FLFTSESVGEGHPDKMCDQ 261
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 271 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 411
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 271 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 411
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 271 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 411
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 427 YDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE-TEECM 603
+DD+S+ + T + DQQ N + ++GA GL +++ T++
Sbjct: 225 HDDNSQPIEILTRILSKTSDQQWENFIGLLETIEKSTDIGASISGLRVSCSSNVLTKDSE 284
Query: 604 PLTVVLAHKLNQKIAELRRN 663
T V+ KLN++ E RN
Sbjct: 285 TQTDVVQRKLNKERREPSRN 304
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 325 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 504
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 505 AAGV 516
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 371 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 463
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,088,206
Number of Sequences: 27780
Number of extensions: 486199
Number of successful extensions: 1365
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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