Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_E07
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 161 2e-38
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 119 9e-26
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 89 2e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 53 1e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 51 3e-05
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 38 0.26
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 2.4
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 34 5.5
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 161 bits (392), Expect = 2e-38
Identities = 80/116 (68%), Positives = 82/116 (70%)
Frame = +2
Query: 491 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWKLPRCALLFRP 670
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP + P CALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 671 CRLPDTCPPFSLREACAFS*LTL*VSXFGVXXXXPSWAVCTNPPFXPTXXPYXVXI 838
CRLPDTCPPFSLREA F PSWAVCTNPPF PT PY V I
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTI 117
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 119 bits (287), Expect = 9e-26
Identities = 70/120 (58%), Positives = 75/120 (62%)
Frame = +2
Query: 323 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 502
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 503 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWKLPRCALLFRPCRLP 682
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP P CALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = +2
Query: 509 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWKLPRCALLFRP 670
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP P CALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 499 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 386
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 299 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 466
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 52.8 bits (121), Expect = 1e-05
Identities = 32/59 (54%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -2
Query: 756 PX*DTYSVSYEKA-HASRREKGGQVSGKRQGRNRRAXRGSFQGKRLVSL*SCRVSPPLT 583
P DT SVSYEKA + +K QVSGKRQGRNRRA G+ K SL PPLT
Sbjct: 41 PSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +2
Query: 398 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 571
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 572 IDAQVRGGETRQDYKDTRRFPWKLPRCALLFRP 670
I Q + +T+ +YK T FP + P +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/85 (38%), Positives = 36/85 (42%)
Frame = +2
Query: 584 VRGGETRQDYKDTRRFPWKLPRCALLFRPCRLPDTCPPFSLREACAFS*LTL*VSXFGVX 763
VR GETRQD K LP P PPFSL + A S +
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 764 XXXPSWAVCTNPPFXPTXXPYXVXI 838
PSWAV NPPF PT PY V +
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTV 107
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 652 RSPVPTLPLTGYLSAFLPSGSV 717
RSPVPTLPLTGYLSAFLPSGSV
Sbjct: 2 RSPVPTLPLTGYLSAFLPSGSV 23
Score = 33.5 bits (73), Expect = 7.3
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 702 PFGKRALSHSSRCRYLXSV 758
P G ALSHSSRCRYL SV
Sbjct: 19 PSGSVALSHSSRCRYLSSV 37
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 418 HSKAVIRLSTESGDNAGKNM 477
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 225 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 347
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 369 ERGSGRAPNTQTASPRALADSLMQ 298
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 38.3 bits (85), Expect = 0.26
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -1
Query: 838 DXYXIRXXGRXERGVXAHSPAW 773
D Y IR GR ERGV AHSPAW
Sbjct: 14 DSYRIRRSGRAERGVRAHSPAW 35
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 110 MIXYIDEFGQTTTRMQ 157
MI YIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.9 bits (74), Expect = 5.5
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -1
Query: 670 GSEQESAXRELPGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 518
G E+ +L G++P +VLS F+ SDL +GGGA GK P R
Sbjct: 10 GLEETETPTDL-GQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 508 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 386
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,513,769
Number of Sequences: 1657284
Number of extensions: 13921472
Number of successful extensions: 38280
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 36700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38254
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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