Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E06
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens ...    32   3.2  
BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene...    31   7.4  

>AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33580 fis, clone BRAMY2011841. ).
          Length = 252

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
 Frame = +2

Query: 362 IFKSKRTIDVCVPRLSSDALAKCLVKVQQQNGSKTRIIIHKSN-DLRNLQLFTLNR--IE 532
           +  ++ ++D+C+   SS  L +  V++  Q G + R++       L   Q+  L +  I+
Sbjct: 87  LLAARASLDLCLFAFSSPQLGRA-VQLLHQRGVRVRVVTDCDYMALNGSQIGLLRKAGIQ 145

Query: 533 VKLIKSEVRLEHEFIVIDSSEPNAMILLGNVCCGGCWNKMECFNKAPTILSSEKS-LVGV 709
           V+  +    + H+F ++D      +++ G++     W      N    +L +E    V +
Sbjct: 146 VRHDQDPGYMHHKFAIVDKR----VLITGSLN----WTTQAIQNNRENVLITEDDEYVRL 197

Query: 710 MKQEFDRIW 736
             +EF+RIW
Sbjct: 198 FLEEFERIW 206


>BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene
           product protein.
          Length = 252

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
 Frame = +2

Query: 362 IFKSKRTIDVCVPRLSSDALAKCLVKVQQQNGSKTRIIIHKSN-DLRNLQLFTLNR--IE 532
           +  ++ ++D+C+   SS  L    V++  Q G + R++       L   Q+  L +  I+
Sbjct: 87  LLAARASLDLCLFAFSSPQLGHA-VQLLHQRGVRVRVVTDCDYMALNGSQIGLLRKAGIQ 145

Query: 533 VKLIKSEVRLEHEFIVIDSSEPNAMILLGNVCCGGCWNKMECFNKAPTILSSEKS-LVGV 709
           V+  +    + H+F ++D      +++ G++     W      N    +L +E    V +
Sbjct: 146 VRHDQDPGYMHHKFAIVDKR----VLITGSLN----WTTQAIQNNRENVLITEDDEYVRL 197

Query: 710 MKQEFDRIW 736
             +EF+RIW
Sbjct: 198 FLEEFERIW 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,726,530
Number of Sequences: 237096
Number of extensions: 1966658
Number of successful extensions: 4049
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4049
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)