Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E06
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ...    33   0.21 
Z68119-2|CAA92192.1|  457|Caenorhabditis elegans Hypothetical pr...    31   0.83 
U16708-1|AAC46497.1|  457|Caenorhabditis elegans odr-7 protein.        31   0.83 
AF025465-3|AAB71027.2|  380|Caenorhabditis elegans Hypothetical ...    31   1.5  
Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AF125963-1|AAD14742.1|  339|Caenorhabditis elegans Serpentine re...    30   2.5  
Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase prot...    28   7.8  
AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase prot...    28   7.8  

>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 7 protein.
          Length = 1887

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 21/87 (24%), Positives = 38/87 (43%)
 Frame = +2

Query: 125  GNFKFTIAETMICPIIQIILATTNLLVRKISTIISNPLKHKNNKNYIKKTMNEVLFYSDD 304
            G F  T  +  I P   ++ +T +L  R+ S  I N  +H N  N  + T+ + +F    
Sbjct: 1328 GTFSLTKTKQQIDPGNMLVESTDDL--RQFSIFIFNKTRHLNESNAKRDTVVDAVFKKSL 1385

Query: 305  DPDHMRMIGLGNIFCIYYVIFKSKRTI 385
               HM ++G   +  +   + K +  I
Sbjct: 1386 RAFHMELLGYEAVLSVEQSVLKYRDVI 1412


>Z68119-2|CAA92192.1|  457|Caenorhabditis elegans Hypothetical
           protein T18D3.2 protein.
          Length = 457

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -2

Query: 750 YDSEFHILSNSCFIT-PTKDFSEDNIVGALLKHSILFQHPPQQTFPSKIMAFGSEE 586
           YDSE    +N  F   P ++ S+D+ +  L K     Q P Q TFP  ++A  S E
Sbjct: 213 YDSELKFDANVDFTAVPKQESSDDSTLKNLKKSDQQLQQPQQFTFPPPLLAEKSFE 268


>U16708-1|AAC46497.1|  457|Caenorhabditis elegans odr-7 protein.
          Length = 457

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -2

Query: 750 YDSEFHILSNSCFIT-PTKDFSEDNIVGALLKHSILFQHPPQQTFPSKIMAFGSEE 586
           YDSE    +N  F   P ++ S+D+ +  L K     Q P Q TFP  ++A  S E
Sbjct: 213 YDSELKFDANVDFTAVPKQESSDDSTLKNLKKSDQQLQQPQQFTFPPPLLAEKSFE 268


>AF025465-3|AAB71027.2|  380|Caenorhabditis elegans Hypothetical
           protein K02E7.6 protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 248 NNKNYIKKTMNEVLFYSDDDPDHMRMIGLGNIFCIYYV 361
           N KNY+K+   E  F  D+D     + G   IF  YY+
Sbjct: 327 NLKNYVKRIQGEGTFDKDEDMADALLKGFETIFTKYYI 364


>Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical
           protein K09E4.4 protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -2

Query: 573 NSCSRRTSDFISFTS--ILFRVNNCKFRRSLLLW 478
           + C +RTSDFI+F S  I +  N C F  S   W
Sbjct: 118 SGCRKRTSDFINFESKQIRYFGNMCTFSYSFAWW 151


>AF125963-1|AAD14742.1|  339|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 20 protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 206 RKISTIISNPLKHKNNKNYIKKTMNEVLFYSDDDPDH 316
           RK+ +II NP K  + + + + T N  +FYS D P H
Sbjct: 295 RKVKSIIRNPFKILS-RPHERATSNSGVFYSRDHPIH 330


>Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical
           protein R10E4.4 protein.
          Length = 759

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -1

Query: 418 RITGQSRDAYINGSL*FKNHIINAENITQSNHSHMIGIIITIKQ 287
           R+T Q+ +  +N  +  +N ++NA+       +H   I IT++Q
Sbjct: 593 RLTPQASEKLVNHYVKMRNPVVNADAFKSGKKAHNSAIPITVRQ 636


>AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase
           protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 666 LLKHSILFQHPPQQTFPSKIMAFGSEESITINSCSRRTSD--FISFTSILFR 517
           L K  +L     +  + SK+M   S E++ +  C  RT+D  F SF  ++ R
Sbjct: 833 LSKGGLLLGEAKEMVYQSKLMDAKSWEALILRFCEMRTTDEKFKSFLPLMHR 884


>AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase protein
           1 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 666 LLKHSILFQHPPQQTFPSKIMAFGSEESITINSCSRRTSD--FISFTSILFR 517
           L K  +L     +  + SK+M   S E++ +  C  RT+D  F SF  ++ R
Sbjct: 833 LSKGGLLLGEAKEMVYQSKLMDAKSWEALILRFCEMRTTDEKFKSFLPLMHR 884


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,710,498
Number of Sequences: 27780
Number of extensions: 337377
Number of successful extensions: 878
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)