Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_E03
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 32 0.098
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 31 0.17
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 31 0.23
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 30 0.52
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 28 1.6
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 28 2.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.8
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 27 3.7
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.7
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 3.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.7
SPBC1711.09c |||SNARE associated Golgi protein |Schizosaccharomy... 27 3.7
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.9
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 6.5
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 26 6.5
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.5
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 26 6.5
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 8.5
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 26 8.5
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 26 8.5
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 26 8.5
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 26 8.5
SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 26 8.5
SPCC63.12c |||20S proteasome component beta 3|Schizosaccharomyce... 26 8.5
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 26 8.5
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 26 8.5
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 32.3 bits (70), Expect = 0.098
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 503 SPLKT-MTNSPKSQ-RLTLTPKTSQETPKIRHTPVTPKVRSPLS 628
SP+ T NSP + ++T P T TP ++H P P VRS +S
Sbjct: 711 SPMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSIS 754
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 31.5 bits (68), Expect = 0.17
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 419 QNSILSSPINYKPTSPLIERLKSPETRNSPLKTMT-NSPKSQRLTLTPKTSQETPKIRHT 595
QN +L SPI +SP+ KS +++ P ++MT P+ + LTP+ S T +
Sbjct: 6 QNVLLPSPI--PSSSPMASHKKSWLSKH-PNQSMTFEKPQLGQFVLTPEPSSNTFYAPSS 62
Query: 596 PVTPKVRSPLS 628
P + R PLS
Sbjct: 63 PASAVRREPLS 73
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 491 ETRNSPLKTMTNSPKSQRLTLTPKTSQETPKI 586
ET +SP T+++SP + + L+P +Q+ PKI
Sbjct: 600 ETDSSPSDTISSSPTVRAVNLSPSKNQKPPKI 631
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 29.9 bits (64), Expect = 0.52
Identities = 20/99 (20%), Positives = 47/99 (47%)
Frame = +2
Query: 392 SKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQ 571
+KR+ ++ + + IN +P+++ S +SPL T ++S T +P +
Sbjct: 518 TKRKDYEELPEEVSETSINIAEHTPVLKHTSSLLDHHSPLAT-SSSEHEMEATPSPALLK 576
Query: 572 ETPKIRHTPVTPKVRSPLSYEIAENILDRPSPLTSRSLR 688
+T K R P + ++ + + ++ + P+ S+S +
Sbjct: 577 KTNKRRELPSSLTKKNTRTPQRSKEVKKVPARKLSQSTK 615
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 496 QKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASHTQSKITA 624
QKLTS + + NS NF ++TY +T S+I A
Sbjct: 326 QKLTSNSWSSPVSYDDSNSSQYNFKWEFDDKTYGPYTASQIQA 368
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 458 TSPLIERLKSP--ETRNSPL-KTMTNSPKSQRLTLTPKTSQETPKIRHTPVTP 607
T+P++E P ET +P+ +T T +P + T+TP + T TP
Sbjct: 92 TTPMVETTTIPTVETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTP 144
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.5 bits (58), Expect = 2.8
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = +2
Query: 401 RILSDIQNSILS-SPINYKPT-SPLIERLKSPET-RNSPLKTMTNSP--KSQRLTLTPKT 565
R L + Q+S S P ++ P+ +P L + + R L + N P RLT TP
Sbjct: 56 RSLQNSQSSSYSLPPFDHPPSKNPTSSSLSTRKRWRQKRLWSFKNFPFRPPTRLTSTPSN 115
Query: 566 SQETPKIRHTPVTPKVRSPLSYEIAENILDRPSPLTS 676
S P I + TP + S + + + D PS L S
Sbjct: 116 SSSLPSIPSSSSTPSI-SSIPHTTSSVSNDIPSVLGS 151
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 573 SCEVFGVRVNLWDFGEFVMVFRGEFLVSGDFNLSIRGEVGL 451
S E++GV ++ W F E + RG + S D +S +G GL
Sbjct: 335 SGEIYGVLLHRWCFLEIFIKLRGAY-PSNDSGISGKGIFGL 374
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 27.1 bits (57), Expect = 3.7
Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Frame = +2
Query: 281 INSGNNATKRKQEEAFSHNYKKKMYPHSLSFDQSPGPSKRRILSDIQN--SILSSPINYK 454
+N+G T + +++M P S+D P R S + S S +N++
Sbjct: 98 VNTGKRYTLTSSSANYMTKSERQMRPPK-SYDFPPSQQVRPSTSRSPSYASYNSEEVNFQ 156
Query: 455 PTS-----PLIERLKSPETRNSPLKTMTNSPKSQRLT---LTPKTSQETPKIRHTPVTPK 610
P ++ P+ SP SP +QR + + P S+ +P +TP P
Sbjct: 157 SYQDPRLLPRTSQMYMPDNNYSPA---VKSPAAQRRSSSYMVPANSRGSPANYNTPYYPT 213
Query: 611 VRSPLSYEIAENILDRPSPLTSRS 682
P E + ++ SP+ S
Sbjct: 214 AIPPPIEEYSPSVSLPTSPVAEES 237
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 502 LTSKNHDKLTKIPEINSHSEN-FTRNTKNQTYASHTQSKITAI 627
L KN+D L + E+NS SE F++N + AS SK+ I
Sbjct: 195 LIDKNNDDLLSVDELNSLSEKCFSKNLSIED-ASEILSKVKEI 236
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +2
Query: 407 LSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKI 586
+ DI + +++ INY E L + + SP++ + S + TP ++ T
Sbjct: 36 VQDIYHDFVATSINYADLLKRNEDLNASLSTGSPVEITSTSCTTDTSASTPIITESTSST 95
Query: 587 RHTPVTPKVRSPL 625
T SPL
Sbjct: 96 SSASTTGSSSSPL 108
Score = 27.1 bits (57), Expect = 3.7
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = +2
Query: 458 TSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPKVRSPLSYEI 637
TS I +P T T + S T TP TS TPVT + +
Sbjct: 475 TSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTT 534
Query: 638 AENILDRPSPLTSRSLRGT 694
+ ++L +P+TS L T
Sbjct: 535 STSVLYTSTPVTSTPLATT 553
Score = 26.6 bits (56), Expect = 4.9
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Frame = +2
Query: 362 SLSFDQSPGPSKRRILSDIQNSILSSPINYK--PTSPLIERLKSPETRNSPLKTMTNSPK 535
S+ + +P S +S + S+P+ TS + +P T T +
Sbjct: 501 SVPYTSTPVTSSNYTISS-STPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTST 559
Query: 536 SQRLTLTPKTSQETPKIRHTPVTPKVRSPLSYEIAENILDRPSPLTS 676
S T TP TS TPVT + + + ++L +P+TS
Sbjct: 560 SVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPITS 606
>SPBC1711.09c |||SNARE associated Golgi protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 270
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 536 ILVSLSWFLEVSFWSLVTLIFLSE 465
+L+ W L V FW++V IF+ E
Sbjct: 69 LLIGAVWGLNVGFWTVVCGIFIGE 92
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.6 bits (56), Expect = 4.9
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +2
Query: 356 PHSLSFDQSPGPSKRRILSDIQNS---ILSSPINYKPTSPLIERLKSPETRNSPLKTMTN 526
P S++Q P+ +Q S +L++ N T P + R + R S +++
Sbjct: 596 PSKASYNQDSSPNASLEQCFVQRSPSKMLTTLRNNSSTFPSL-RKNAMIARKSTADSLS- 653
Query: 527 SPKSQRLTLTPKTSQETPKIRHTPVTPKVRSPL 625
SPK Q + TPK S + +P SPL
Sbjct: 654 SPKRQSVPSTPKASLSPRVHKSMTYSPSEASPL 686
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 440 PINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQET 577
P + KP++ + + E RN+ + NSP S + + K++ T
Sbjct: 129 PTDNKPSASTSTAVPTTEARNTSITEPANSPSSSSSSASTKSTATT 174
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 401 RILSDIQNSILSSPINYKPTSPLIERLKSPETR 499
++LS+I I + Y P + +LKSPET+
Sbjct: 276 KVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETK 308
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 418 TKLYTQLTN*LQTYFTSDRKIKVTRDQKLTSKNHDKLTKI 537
TK YT + + L T+ D + T +KLTSK +L K+
Sbjct: 210 TKNYTHIFDSLLTFTRHDSEDVSTSVEKLTSKKISELEKL 249
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 488 PETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK-VRSPLSYEIAENILDRPS 664
P +PL+ N+P + R L + +++ TP PK ++S +I + PS
Sbjct: 158 PARMQTPLRKPENNPHTGRSALLHRVLDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPS 217
Query: 665 PLTSR 679
P++ +
Sbjct: 218 PISMK 222
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 305 KRKQEEAFSHNYKKKMYPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSP 466
K+ +EA + N K+K++P S + + S + SPI KP SP
Sbjct: 561 KQAIQEAHTINTKRKLWPQSTLIQAPNSDDEENVPSPSPKKKVVSPI--KPLSP 612
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 738 RLYQDLSSNTSLIFNVPLRLRLVRGEGLSRMFSAISYDSGDLTLGVTGVCLIFGVSC 568
R+YQ + I+NV + ++ L RM S + + G G+C +FG+ C
Sbjct: 398 RIYQGTLKRGNYIYNVN-STKKIKVSRLVRMHSNDMEEIEKVEAG--GICALFGIEC 451
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 482 KSPETRNSPLKTMTN-SPKSQRLTLTPKT--SQETPKIRHTPVTPKVRSPLSYEIAENIL 652
KS +S T + PK+ +++P ++ P+ P +RSPL + +EN
Sbjct: 704 KSSSKSSSAKSTAADMKPKADSKSISPGFVGGNQSLSSERIPLDPSMRSPLQQQSSENES 763
Query: 653 DRPSPLTSRSL 685
S L++ +L
Sbjct: 764 KSQSMLSANNL 774
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 536 SQRLTLTPKTSQETPKIRHTPVTPKVRSPLS 628
SQR TP S+ TP+ VTP R L+
Sbjct: 23 SQRRHFTPSRSRYTPRSAQRTVTPHKRRALA 53
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 383 DFGRS*ASGGTSSFCSCARMLLPVYVLLRCYRNLSLK 273
DF A GGT C +LP + L+ +NLS +
Sbjct: 103 DFATHSALGGTRDGCFQKYAVLPAHALVHAPKNLSFE 139
>SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 661
Score = 25.8 bits (54), Expect = 8.5
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 374 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERL----KSPETRNSPLKTMTNSPKSQ 541
D S ++ R+L+ + L + +K S LI +L + PE+RN LK + S K
Sbjct: 360 DNSFFRNRHRLLAIHLATHLHTTCTHKLASTLIFKLINNKQEPESRNLLLKNLFFSEKDN 419
Query: 542 RLTLTPKTSQETPKIRHTPVT 604
LT + P H +T
Sbjct: 420 VLTYILQDQAVGPSFIHKVIT 440
>SPCC63.12c |||20S proteasome component beta 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -1
Query: 681 LRL-VRGEGLSRMFSAISYDSGDLT-LGVTGVCLIFGVSCEVFGVRVNLWDFGE 526
LRL V+ L+ F + + GD T LG+TG+ E+F +VNL+ F E
Sbjct: 26 LRLGVQSISLTNNFPKV-FAMGDKTYLGLTGLATDVQTLYELFRYKVNLYKFRE 78
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 572 ETPKIRHTPVTPKVRSPLSYEIAENILDR 658
ETPK +H+ + + +SPL A+ +L +
Sbjct: 128 ETPKKKHSLIRKRRKSPLDSSSAQKVLKK 156
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 448 LQTYFTSDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFT 570
LQ YFT+ + ++Q SKN D KI + H F+
Sbjct: 371 LQRYFTALEMQQDQKEQHKKSKNKDPFRKITHPSLHLGKFS 411
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,503,963
Number of Sequences: 5004
Number of extensions: 72375
Number of successful extensions: 295
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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