Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_E02
         (869 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17I55 Cluster: Symplekin; n=2; Culicidae|Rep: Sympleki...    33   7.1  
UniRef50_Q7R2N7 Cluster: GLP_546_26107_24470; n=1; Giardia lambl...    33   9.4  

>UniRef50_Q17I55 Cluster: Symplekin; n=2; Culicidae|Rep: Symplekin -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1136

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 16/67 (23%), Positives = 35/67 (52%)
 Frame = +1

Query: 277 FLSFLAVPKVSAIDLIIHIVFSLVRGLAPSNLHDLLFSCNNLAIHKHPYYYLANTSKLCK 456
           F+  +    +S +  ++HI+F+L+R  APS    ++  C   AI+K    ++ + S + +
Sbjct: 88  FIEDVCKTNISHLPKVVHILFALLRDTAPSVTKRVIQGCG--AIYKQALQWICSLSDITE 145

Query: 457 NIPRGTN 477
            + +  N
Sbjct: 146 EVEQAWN 152


>UniRef50_Q7R2N7 Cluster: GLP_546_26107_24470; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_546_26107_24470 - Giardia lamblia
           ATCC 50803
          Length = 545

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 334 VFSLVRGLAPSNLHDLLFSCNNLAIHKHPYYYLANTSKLCKNIPRG 471
           V+ +V    P NLHDLL+ CN++  H      +A    +C  + RG
Sbjct: 244 VYFIVMAYFPYNLHDLLY-CNDVRFHLPQRLPIAIAKNICLQMARG 288


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,876,367
Number of Sequences: 1657284
Number of extensions: 13090478
Number of successful extensions: 25257
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25253
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)