Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_E01
(910 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 109 7e-23
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 88 3e-16
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 82 2e-14
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 62 1e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 42 0.022
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.35
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 36 1.4
UniRef50_Q1WMS0 Cluster: Putative glycogenin; n=1; Coprinellus d... 36 1.4
UniRef50_Q5IW58 Cluster: Phosphinothricin tripeptide synthetase ... 35 3.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 33 7.6
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 109 bits (263), Expect = 7e-23
Identities = 66/111 (59%), Positives = 71/111 (63%)
Frame = +2
Query: 395 VCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQEXTCEQKASKRPGTVK 574
+C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE---I 77
Query: 575 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRCALLF 727
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP P CALLF
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL-VAPSCALLF 127
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 87.8 bits (208), Expect = 3e-16
Identities = 56/113 (49%), Positives = 60/113 (53%)
Frame = +2
Query: 551 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRCALLFP 730
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP + P CALLF
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLF- 59
Query: 731 TXAXLPXYLXRLFSPSGKRGAFLHXSRXXXXSXPGXVXXXXTWAVXPXPPVXP 889
P L P R A+ +WAV PP P
Sbjct: 60 ----RPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 82.2 bits (194), Expect = 2e-14
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = +2
Query: 569 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRCALLF 727
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP P CALLF
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLA-APSCALLF 95
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -1
Query: 559 PFAGLLLTCXFLRYPLILWITVLPPLSELIPLAAAERP 446
P LLTC F YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 359 CINESANARGXAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 526
CI + A AR AV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 45.6 bits (103), Expect = 0.002
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 458 CGERYQLTQRR*YG--YPQNQGITQEXTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 631
C R Q R G +P+N I + + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 632 IDAQVRGGETRQDYKDTRRFPPGKLPRCALLFP 730
I Q + +T+ +YK T FP + P +LLFP
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPL-QSPSYSLLFP 113
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 162 DPDMIRYIDEFGQTTTRMQ 218
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 41.9 bits (94), Expect = 0.022
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 478 HSKAVIRLSTESGDNAGXNM 537
HSKAVIRLSTESGDNAG NM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.35
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2
Query: 429 ERGSGRAPNTQTAXPRALADSLMQ 358
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 357 SALMNRPTXGXRRFAYW 407
+ALMNRPT G RRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_Q1WMS0 Cluster: Putative glycogenin; n=1; Coprinellus
disseminatus|Rep: Putative glycogenin - Coprinellus
disseminatus
Length = 995
Score = 35.9 bits (79), Expect = 1.4
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 592 FFHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPP---WKAPSLRSPVPDPCXFTGIPVP 762
F H +PP H+NR +Q R P L R A PP W P+L SP DP P
Sbjct: 487 FSHTHQPPPHVHQNR--AQHSRPPEPLNRL-ASPPLLSWN-PALESPPNDPPPINAFPSD 542
Query: 763 PFLP 774
P+ P
Sbjct: 543 PYFP 546
>UniRef50_Q5IW58 Cluster: Phosphinothricin tripeptide synthetase II;
n=2; Streptomyces viridochromogenes|Rep:
Phosphinothricin tripeptide synthetase II - Streptomyces
viridochromogenes
Length = 1086
Score = 34.7 bits (76), Expect = 3.3
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -1
Query: 718 SATRELSRGETPGI-FIVLSG-FATSDLSVDFCDARQGGGAYGKTPAT 581
SA L+ GE PG+ +V++G AT +L+ +CD R YG T AT
Sbjct: 748 SALSTLTAGELPGLRTVVMAGEAATLELAQQWCDGRDVFNGYGPTEAT 795
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.5 bits (73), Expect = 7.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 568 GSWPFAGLLLTCXFLRYP---LILWITVLPPLSELIPLAAAERP 446
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,803,832
Number of Sequences: 1657284
Number of extensions: 12221110
Number of successful extensions: 30868
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30835
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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