Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D24
(872 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 52 1e-07
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 51 2e-07
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 50 6e-07
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 37 0.003
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 32 0.093
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.86
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 28 1.5
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.5
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.6
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.6
SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr... 26 6.1
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.1
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 342 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 521
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 522 AI 527
AI
Sbjct: 64 AI 65
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 51.2 bits (117), Expect = 2e-07
Identities = 29/80 (36%), Positives = 37/80 (46%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIRTRLTTA 548
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G I+
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIKESGVPR 77
Query: 549 P*GETSFSLWVNCGVHSIAP 608
+ LW N P
Sbjct: 78 KDIWVTSKLWCNAHAPEAVP 97
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 49.6 bits (113), Expect = 6e-07
Identities = 32/85 (37%), Positives = 40/85 (47%)
Frame = +3
Query: 357 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIRTR 536
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ IR
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIRES 72
Query: 537 LTTAP*GETSFSLWVNCGVHSIAPI 611
+ LW N + P+
Sbjct: 73 GVPRTDIWVTSKLWCNAHRAGLVPL 97
Score = 35.5 bits (78), Expect = 0.010
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 AHRKSDQNKIDDGT----VRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
AH ++ +I +G V R ++++ KLW HR LV A +L DL LE+
Sbjct: 56 AHIYGNEKEIGEGIRESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEY 110
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 363 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAI 60
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 32.3 bits (70), Expect = 0.093
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +3
Query: 387 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIR 530
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A++
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK 65
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.1 bits (62), Expect = 0.86
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -2
Query: 331 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQ 167
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQ 102
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +3
Query: 432 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIR 530
T ++ A D+G DTA IY N E ++GKAI+
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 388 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 257
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 382 VPSRSFKVATSFTLPFSLASFSSAILV 302
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 460 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 314
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 747
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 707 CSFLQRHRIGMRKRSKTPSPGLPVKSCRPSPP 612
C + R +G R+ + P+PGL CR P
Sbjct: 9 CRLVSRIPLGFRRLKRNPNPGLRNILCRRYSP 40
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 349 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 206
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,350,683
Number of Sequences: 5004
Number of extensions: 66674
Number of successful extensions: 202
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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