Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D24
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 46 5e-05
04_01_0350 - 4610444-4610668,4612181-4612969 45 9e-05
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 42 6e-04
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 42 9e-04
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 42 9e-04
10_01_0065 + 845447-846187,846969-847193 41 0.001
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 41 0.001
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 41 0.001
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 40 0.003
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 39 0.006
10_01_0066 + 848523-849269,849520-849741 38 0.008
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 38 0.011
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 35 0.098
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 33 0.30
11_06_0588 + 25272067-25274850 31 1.6
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 30 2.8
09_02_0012 + 2965797-2966714,2966756-2967011,2967051-2967147,296... 29 3.7
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 28 8.5
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 28 8.5
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 8.5
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 45.6 bits (103), Expect = 5e-05
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLP------PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
LR G MP++ +GTA P P + V AID GYR DTA YG E +G+A+
Sbjct: 21 LRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLGEAV 79
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 44.8 bits (101), Expect = 9e-05
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 354 VATLKLRDGTFMPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
V + L G MPV+ GT + PP + A+ +GYR +DTA +YG E +G A+
Sbjct: 20 VPCVTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAV 78
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLP-----PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
L G MP + +GTA P P ++V AI+ GYR DTA +Y E ++G A+
Sbjct: 6 LSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAV 63
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIR 530
L G +P + LGT P + V A+ GYR ID A Y NEK IG A++
Sbjct: 7 LNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALK 60
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 539 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
D+G V+R+++FI KLW T H + V A +L DL ++
Sbjct: 64 DEGIVKREDIFITSKLWCTNHAPEDVPVALDSTLQDLQTDY 104
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 41.5 bits (93), Expect = 9e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIR 530
L G +P + LGT P + V A+ GYR ID A Y NEK +G A++
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALK 60
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 387 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
MP + +GTA P TT + AI++GYR DTA IY E +G+A+
Sbjct: 16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAV 65
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 357 ATLKLRDGTFMPVIALGTALLP--PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
A L+ D MP + +G A P P T + V A++ G+R DTA +Y E +G+AI
Sbjct: 8 AVLRHGDARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAI 66
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 557 RDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
R+E F+ KLW T DLV + R SL +L +E+
Sbjct: 78 REEAFVTTKLWCTQCHPDLVLPSLRESLRNLQMEY 112
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +3
Query: 378 GTFMPVIALGTALLPP---RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
G +P + LGTA L + A+++GYR IDTA +YG+E+++G+A+
Sbjct: 25 GRAVPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAV 77
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 557 RDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
R+E+F+ K+W T DLV + R SL +L +E+
Sbjct: 89 REEVFVTTKVWCTQCHPDLVLPSLRESLQNLQMEY 123
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIR 530
L G +P + LGT P + + V A+ GYR ID A +Y NE +G A++
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALK 60
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 539 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
++G V+R++LFI KLW H + V + +L+DL LE+
Sbjct: 64 EEGVVKREDLFITSKLWCDCHAPEDVPESLDKTLSDLQLEY 104
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 369 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNE-KLIGKAIR 530
L G +P + LGT + ++V A+ GYR ID A +Y NE ++IG A++
Sbjct: 7 LNTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALK 61
Score = 34.7 bits (76), Expect = 0.098
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 539 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
DDG V+R++LFI K+W + + V A +L DL L++
Sbjct: 65 DDGVVKREDLFITSKIWCSDLAPEDVPLAMDSTLKDLQLDY 105
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 387 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAI 527
MP I +GTA P TT + AI++GYR DTA +Y E + +A+
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAV 67
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 37.9 bits (84), Expect = 0.011
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 342 SVKEVATLKLRDGTFMPVIALGTA---LLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKL 512
+V EVA L+ G MP + +GTA P A+++G+R DTA +YG E
Sbjct: 3 AVPEVA-LRHGAGRPMPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAP 61
Query: 513 IGKAI 527
+G+AI
Sbjct: 62 LGEAI 66
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 557 RDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
R+E+F+ KLW T LV + R SL +L +E+
Sbjct: 78 REEVFVTTKLWCTQCHPGLVLPSLRESLRNLQMEY 112
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 34.7 bits (76), Expect = 0.098
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 378 GTFMPVIALGTALLPPRLTT--EIVETAIDMGYRAIDTAYIYGNEKLIGKA 524
G MP + +GTA+ PR V AI+ GYR DTA Y E IG+A
Sbjct: 12 GFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEA 62
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 545 GTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
G V+R++LFI KLW++ H +VE AC+ SL L L++
Sbjct: 74 GLVKREDLFITTKLWNSDH-GHVVE-ACKDSLKKLRLDY 110
>11_06_0588 + 25272067-25274850
Length = 927
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 569 KARLASRCRRQSCSDRFSYELFVAVNISGIYSSVAHINSSLHYFRC*PWRKQSCAQGYDR 390
KARL R RR + E+ A + + + ++ HY +C PW KQ+ +D
Sbjct: 28 KARLLGRVRRDMQFIKDEMEMMDAFLLLLLKQQASTLDRH-HYNKCAPWIKQAVELAHDC 86
Query: 389 HEC 381
+C
Sbjct: 87 QDC 89
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 396 IALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIRTRL 539
+A+ + + ++ + GYR +DTA YG E+ +GK ++ +
Sbjct: 69 VAMASKPILSVFANNLIVNHLQAGYRHVDTAAQYGIEQEVGKGLKAAM 116
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 551 VRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 661
+ R +LF+ K+W T + V A + +L DL L++
Sbjct: 120 INRKDLFVTSKIWCTNLAPERVRPALKNTLKDLQLDY 156
>09_02_0012 +
2965797-2966714,2966756-2967011,2967051-2967147,
2967175-2967634,2967804-2968117,2968220-2968235
Length = 686
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 210 VKMESPGSGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEAKLKGSVKEVATLKLRD 377
V E PG G + D G +T + K R A L EA + +KE A K +D
Sbjct: 603 VYAEFPGGGNNDAQEPLLE-DAGKITCTRQKVRAASLEEAVFRTEIKEGAEGKAKD 657
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 314 CDPGLILFVCEVSRVSLLFAVVQAPLPAPGRLHLDRS 204
C L+ F+ + L F V P PAP LH R+
Sbjct: 341 CSTSLVHFLIALQPTPLPFGVQLKPAPAPRELHTSRA 377
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +3
Query: 441 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIR 530
++ A+ G +DTA IYG NE L+GKA++
Sbjct: 49 LIHHAVAAGVTLLDTADIYGPHANEALLGKALQ 81
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 229 GAGSGAWTTANRSETRETSQTNNIRPGSQN*TKLS*KG 342
G G+GA ++A + TR+T N+ R GS + +S G
Sbjct: 215 GGGAGAGSSAGGAMTRDTEAENDSRSGSDHLDAISAAG 252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,456,389
Number of Sequences: 37544
Number of extensions: 470772
Number of successful extensions: 1521
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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