Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D22
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 40 0.003
03_02_0484 + 8805053-8805538 40 0.003
03_02_0483 - 8804021-8804485 40 0.003
03_02_0478 + 8775892-8776377 38 0.008
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 37 0.024
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 36 0.032
01_01_0229 - 1943473-1943922 36 0.032
01_01_0231 + 1951047-1951499 36 0.043
02_02_0077 - 6586638-6587165 34 0.13
01_01_0227 + 1933247-1933699 33 0.23
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.92
07_01_1127 + 10456895-10457388,10457488-10458112 29 4.9
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 6.5
09_03_0036 + 11772940-11773171,11774995-11775104 29 6.5
04_01_0252 - 3329712-3331061 29 6.5
09_04_0139 + 15030753-15031208,15031298-15031523,15031599-150319... 28 8.6
03_01_0491 + 3720842-3720958,3721904-3723109 28 8.6
>03_02_0485 - 8808139-8808618
Length = 159
Score = 39.9 bits (89), Expect = 0.003
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +1
Query: 355 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 510
DV EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 511 SVESRLSSDGVLSVIAPXKVP 573
+++ + +GVL+V P + P
Sbjct: 128 QIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +1
Query: 355 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 510
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 511 SVESRLSSDGVLSVIAPXKVP 573
+++ + +GVL+V P + P
Sbjct: 130 QIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +1
Query: 355 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 510
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 511 SVESRLSSDGVLSVIAPXKVP 573
+++ + +GVL+V P + P
Sbjct: 123 QIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 355 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 510
DV EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 511 SVESRLSSDGVLSVIAP 561
+++ + +GVL+V P
Sbjct: 130 QIKASM-ENGVLTVTVP 145
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 36.7 bits (81), Expect = 0.024
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 355 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 510
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 511 SVESRLSSDGVLSVIAP 561
V++ L +GVL+V P
Sbjct: 119 QVKAGL-ENGVLTVTVP 134
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 36.3 bits (80), Expect = 0.032
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Frame = +1
Query: 274 PWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ-- 447
P R LA + + D + ++ D+ + EE+ V D +V+ G+H++++ +
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 448 ----HGYISRQ----FTRRYALPEGCTAESVESRLSSDGVLSVIAP 561
G+ + + R ALP+ C V + L +GVL V P
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVP 226
>01_01_0229 - 1943473-1943922
Length = 149
Score = 36.3 bits (80), Expect = 0.032
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 355 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 510
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 511 SVESRLSSDGVLSVIAP 561
V++ + +GVL+V P
Sbjct: 118 QVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 35.9 bits (79), Expect = 0.043
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 355 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 510
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 511 SVESRLSSDGVLSVIAP 561
V++ + +GVL+V P
Sbjct: 119 QVKAGM-ENGVLTVTVP 134
>02_02_0077 - 6586638-6587165
Length = 175
Score = 34.3 bits (75), Expect = 0.13
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 13/134 (9%)
Frame = +1
Query: 256 SREYYRPWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIV-VEGKHE 432
+R Y R R +A D+ S + +D+ AP ++ V+ DG ++ + G+
Sbjct: 36 TRAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEVEDGNVLAISGERR 93
Query: 433 EKK---DQHG----YISRQ-----FTRRYALPEGCTAESVESRLSSDGVLSVIAPXKVPP 576
D G Y+ + F RR+ LPE + V + DGVL+V K PP
Sbjct: 94 RPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPP 152
Query: 577 AVEGERXIPIAQTG 618
+ R + + G
Sbjct: 153 EPKKPRVVEVKVAG 166
>01_01_0227 + 1933247-1933699
Length = 150
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 415 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAP 561
V+GK++E+ S +F RR+ LP G + V + + +GVL+V P
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVP 134
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 430 RVCLQPRCSRPPF*QRFLPGRNAGR 356
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 430 RVCLQPRCSRPPF*QRFLPGRNAGR 356
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 377 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 472
KKS T TS K TRRRK+++V Y S
Sbjct: 16 KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47
>09_03_0036 + 11772940-11773171,11774995-11775104
Length = 113
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 375 GRNLC*NGGRLHRG*RQTRGEERSAWLH 458
G+NL G+ H G R+ RG+ER LH
Sbjct: 21 GQNLMDRRGKRHEGRRERRGKERGRNLH 48
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 430 RVCLQPRCSRPPF*QRFLPGRNAGR 356
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>09_04_0139 +
15030753-15031208,15031298-15031523,15031599-15031981,
15032353-15032685,15032902-15033010,15033089-15033465
Length = 627
Score = 28.3 bits (60), Expect = 8.6
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Frame = +1
Query: 181 RLMDQHFGLGLTPEDFLSAAAGPLVSREYYRPWRHLAAAARDLG--SSIKSDKDKFQVNL 354
+ ++ HF + LT + + + R W+ + DL S+ SD D F ++L
Sbjct: 407 KALNDHFNINLTSDQITN----------HIRTWKRKYSKIADLRKLSAALSDDDNFIISL 456
Query: 355 DVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSS 534
D +H+A + I AD + + H K + + T +YA + S L+
Sbjct: 457 DHKHYA-DHIKDHKADAEYLNKPIHNYSKMLVIFGNSLATGKYAKGSATGSASRVHALNE 515
Query: 535 DGVLSVIAP 561
+ S AP
Sbjct: 516 ENGASSSAP 524
>03_01_0491 + 3720842-3720958,3721904-3723109
Length = 440
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 258 AHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFV 160
A G GC K+F S+ +A+ H A +L F+
Sbjct: 391 ADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,391,753
Number of Sequences: 37544
Number of extensions: 470181
Number of successful extensions: 1223
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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