Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D21
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0723 - 6360652-6360753,6360898-6361239                           30   2.0  
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810...    30   2.0  

>12_01_0723 - 6360652-6360753,6360898-6361239
          Length = 147

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 139 LKDVPIIPDQIPKNKI*CSNIFMICRINSFSQNLKDS 29
           L D+P++   +P   + C N  +I ++NS   N+K S
Sbjct: 22  LMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDNMKSS 58


>01_05_0320 - 20874691-20875230,20879337-20879590,20880014-20881087,
            20881259-20881511,20881548-20882369
          Length = 980

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 139  LKDVPIIPDQIPKNKI*CSNIFMICRINSFSQNLKDS 29
            L D+P++   +P   + C N  +I ++NS   N+K S
Sbjct: 893  LMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDNMKSS 929


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,947,391
Number of Sequences: 37544
Number of extensions: 290449
Number of successful extensions: 409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)