Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D20
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical...    89   3e-18
Z98877-10|CAB63406.1|  314|Caenorhabditis elegans Hypothetical p...    29   3.4  

>AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical
           protein F40G9.2 protein.
          Length = 63

 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 38/45 (84%), Positives = 38/45 (84%)
 Frame = +1

Query: 193 KLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 327
           KLK CCACPETKR RDACIIENGEE CG LIE HKACMR  GFNI
Sbjct: 19  KLKACCACPETKRVRDACIIENGEEKCGKLIEAHKACMRAAGFNI 63


>Z98877-10|CAB63406.1|  314|Caenorhabditis elegans Hypothetical
           protein Y69H2.9 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
 Frame = +1

Query: 22  HY*GIR*RFXLLSCELKNNKLNCIICEKTS*KMGNASAKAVEVK-VLEGPAPENVEKPKL 198
           HY  I  R  +++  L+N++      +K        +  A EVK V+     ENV     
Sbjct: 157 HY--INNRLTIMNVPLENSEYIMFFDQKQKLLALRVAKFAGEVKPVISLSEMENVLN--- 211

Query: 199 KPCCACPETKRARDACIIE-------NGEENCGPLIEEHKACMRK 312
           K   AC E+KRA +AC++E         E NC    E+H+ C+ K
Sbjct: 212 KSTIACSESKRAVNACVVEFFICYTMFTEANC---TEKHENCVSK 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,593,622
Number of Sequences: 27780
Number of extensions: 314456
Number of successful extensions: 687
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)